Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq5 309 4e-79 seq3 203 4e-47 >seq5 Length=915096 Score = 309 bits (342), Expect = 4e-79 Identities = 1327/2076 (64%), Gaps = 47/2076 (2%) Strand=Plus/Plus Query 52799 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 52858 || || | |||||||||||||| ||||| |||| || || | | |||||||| || Sbjct 37868 TTATCAACTGTGAATTGAATGGCAGCGGCGGCGGCTTGAGTTCTCAAGTAGTACATACCG 37927 Query 52859 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGA 52918 || |||| ||| |||| ||||| || ||||| || | || | | ||| Sbjct 37928 GTCTTTAAACCCTTCTTCCAACCGTAGAAGTGCATGGAAGTCAACTTACCCATAGTTGGA 37987 Query 52919 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 52978 || | ||||| |||||||||||| |||||| | | | || || ||||| |||| | Sbjct 37988 GCTCTCAAGTGGATGTTCATAGATTGAGATTGATCAACGTAAGCACCTCTGTCAGCAGAC 38047 Query 52979 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 53038 || | ||||| | |||||| | ||||||||||| || ||||| | | | || | || Sbjct 38048 ATATCAATGATAGACTTTTGAGAAATTTCCCAAACGGTCTTATACAATTGTTTTAATTCA 38107 Query 53039 TCTGGAAGGTTTGTA---TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATC 53095 || |||| ||||| || ||||| || ||| ||| ||||| ||||| || Sbjct 38108 TCAGGAACGTTTGGCAAGTTTTGAATGGAACCATTATCAGAAATAATGTGGTTCTTCATA 38167 Query 53096 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 53155 |||| ||||||| || ||| |||| | | | || ||||| | ||| Sbjct 38168 GAGTCATCCCATAATCCAAGGTCAACCAAATCTCTCAACAAGTATGGGTTAACAATTTGG 38227 Query 53156 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 53215 ||||| |||| | ||||| | || ||||||||| || || ||||| | | | ||| Sbjct 38228 AATTCACCAGCTAGCACTCTTCTAGAGTAAATATTGGAAGTGTATGGTTCGAAACATTCA 38287 Query 53216 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 53275 || | ||||| ||||| | ||| || ||||| ||||| || || | ||||| ||| Sbjct 38288 TTGTAACCCAAGATTTGGGAAGTAGAAGCAGTTGGCATTGGAGCAAGTAATAAGGAGTTT 38347 Query 53276 CTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGT-TCCCAATTCCAAAGATCCGACGG 53334 || | ||| | || ||||| | || || | || | ||||| | ||| | ||| | || Sbjct 38348 CTTAAACCATTGGTCATGATTCTTTCCTTCA-AGTTATCCCAGTCCCATAAATCAGTTGG 38406 Query 53335 --TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 53392 | || ||| | ||||| | || || ||| || | Sbjct 38407 CTTCTTACCCCATAAATCGAA--TTGCAAGATACCTTGGGAAGCTGGAGAACCTTCAAAA 38464 Query 53393 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 53452 || || || ||||| | |||| ||| |||||||| ||||| | ||| Sbjct 38465 GTTTCATACTTACCTTCTTCGATGGCTAATTCGACGGAGGCCTCTAAAGCACCATGGTAA 38524 Query 53453 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT 53512 | |||||| ||||| | | |||| || ||||| | ||||||||| | | | Sbjct 38525 AGGGTTTCAAAGATTTGAATGTTTAACAATTTAGCTTCTGGAGAGTCAAATGGA-ATTCT 38583 Query 53513 AAGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 53571 || | || || || || ||||| ||||||||||||| | |||||||| | |||| | Sbjct 38584 CAGTAACATGAATGCATCAGCTAAACCTTGAACACCAAGGGCAATAGGTCTGTTTCTCAT 38643 Query 53572 ATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTT 53631 ||||| | ||| | || || |||||||| | || ||||| ||||| | ||| Sbjct 38644 GTTAGAACGTCTAGCAGTTTCAACTGGGTAATAATTTCTGTCGATAATCTTATTCAAGTT 38703 Query 53632 TCTGACA-ATTACTTTGACCACATCCTTCAGTTTGAGAAAAT----CAAATTGTCCATCT 53686 || | | | || ||| | | || | | || ||| | | || ||| | ||| Sbjct 38704 -CTTAGAGACAACCTTGGCGATCTCGTGTAACTTTTCAAAGTTGTACCAAGTGTTCTTCT 38762 Query 53687 ------ATTACAAACATGTTCAATG--CAATAGATGCCAGATTACAAACGGCTACCTCAT 53738 ||| | | | | | | | |||| || |||| ||||| || || || | Sbjct 38763 CATCAGATTCAACAAAGGCTGGAAGGGCAATGGAAGCCAAGTTACACACAGCGGTTTCTT 38822 Query 53739 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 53798 |||| | |||| | || ||| || | || |||| || | || || | Sbjct 38823 GTTCATCGGAGTATTCAACAATTTCACAACACAAGTTGGAGGACTTAATCATACCCAAGT 38882 Query 53799 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTT 53858 | | ||| || || |||||||| |||||||| || | |||||||| |||||||| | Sbjct 38883 TCTTTTGGTTGGATTTCTTGTTACAGGCATCCTTGTATAACATGAATGGGGTACCAGTCT 38942 Query 53859 CAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATC 53918 || | || | ||||| || | | ||| | ||||||| || | ||| | | Sbjct 38943 CAGTTTGAGCTTCTAAGATGGAGTACCATAACTTTTGAGCCTTGATAGTGGATCTA---C 38999 Query 53919 TCTT---TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGT 53975 ||| ||||||||||||| | ||||||| ||| || || || || | |||| Sbjct 39000 CCTTACCTTCTCTTTCGTATCTTTCATACAATTCTTCGAATTCATCACCGTAGACATCAC 39059 Query 53976 CCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 54035 | || || ||| |||| || | | ||| | ||| || || | | | |||| | Sbjct 39060 CTAAACCTGGAGCTTCAGATGGGGAGAACAAAGTCCATTCACCATTAGATTCAACTCTCT 39119 Query 54036 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 54095 |||| || | ||| || ||||| | ||| || | |||||| | ||| ||| || | Sbjct 39120 TCATGAATAAATCTGGGATCCATAAGGCTGGGAACAAATCTCTAGCTCTGATTTCTTCCT 39179 Query 54096 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 54155 | || |||||| ||| || | || | | ||||||| ||||| ||||| | || Sbjct 39180 TACCGTGGTTCTTTCTAATGTCAATAAAATCAAAGATATCAGCGTGCCATGGTTCAATGT 39239 Query 54156 ATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 54215 | | || | | | || || | ||||| || || ||||| | |||||| |||||||| | Sbjct 39240 ACAAGGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAACGTATCTGGCGGTGTTGT 39299 Query 54216 TATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGC 54275 | | ||||||| ||||||||| ||||| || || | ||| || || || | ||| || Sbjct 39300 TGAACACTCTCACCATTGGAATGATACCGTTAGAGGTACCGTTAGTACCAGCGATGTAAG 39359 Query 54276 TTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTA 54335 || | || | ||||| || || || || || || || | ||||| || | Sbjct 39360 AACCGGTAGCTCTGATATTGTGGATGTGTAACCCAATACCACCAGCGGTCTTAGAAATCA 39419 Query 54336 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 54395 || ||| || || ||||| || || || || || |||||| ||||| || || Sbjct 39420 GAGCACATTCCTTCAAAGTATCGTAAATCCCTTCAATGGAGTCATCCTTCATGGCAACTA 39479 Query 54396 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 54455 ||||| ||||||||| | || ||| || |||||||| || || ||||| |||| Sbjct 39480 AGAAACAAGAAGACATTTGTGGGTGAGGAGTACCAGCATTAAACAAAGTTGGAGACGCGT 39539 Query 54456 GCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGC--TGAGTCTATATCCCA 54513 | || || || | ||||| | | ||| || || || || | | | ||| | || Sbjct 39540 GAGTGAAGTATCTCTCAGACATCAAATTATAGGTTTCAATCACCTTTGGGATAT-TATCA 39598 Query 54514 TTGATGAATTCCTACTGCGACACGCAT--TAACATGTGCTGAGGTCTTTCAACGATCTTG 54571 | || || || | ||||| | ||| | | |||| |||||||| || | | ||| Sbjct 39599 CCG-TGGATACCAATGGCGACTCTCATGGTTAAATGT--TGAGGTCTCTCGGCAACCTTA 39655 Query 54572 TTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TG 54629 || ||| | | ||||| ||| ||||||| || ||||| || ||||| || || || Sbjct 39656 CCGTCGATTCTTAATAAGTAAGATCTTTCCAAGGTCTTAAACCCGAAATAATTATAACTG 39715 Query 54630 AAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACAT 54689 ||| || || || |||| ||| | ||||| | || || | | || | || | || Sbjct 39716 AAA--TCACGGTCATAAACGATAGCAGAGTTTAATTCTTCACTGTGCTTTTGGACAATAT 39773 Query 54690 CCATGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTA 54748 | || || ||| || | || || || |||||||||| || || ||||| || | Sbjct 39774 CGTAAGT-ATCCTTGGACACCATAGGGGATGGTTTCCCATTCTTTGGGTTGACGTAAGTG 39832 Query 54749 AATAAATCCTTC-ATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATAC 54807 | || | ||| || |||| | || | ||| | |||| ||||| | || || | Sbjct 39833 TA-AAGTTGTTCAATAACTTGAGAGAACTGCTTTGTCGTTTGCTTGTGCAAGTTAGAGAT 39891 Query 54808 GGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843 ||| |||||||| |||| || ||||||||| ||||| Sbjct 39892 GGCGATTCTAGCAGCTAAAACGGCATAATCTGGATG 39927 Score = 98.7 bits (108), Expect = 1e-15 Identities = 230/345 (67%), Gaps = 4/345 (1%) Strand=Plus/Minus Query 53952 CAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACC 54011 ||||||| || || |||||| | ||||||||| | ||| | | | ||| ||| Sbjct 153288 CAAACTCCTCACCATAAACATCAGTGAGTCCAGGACACTTATCTTGGGAAAACAAACACC 153229 Query 54012 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 54071 | ||| | | || ||| || |||||| | |||||||||||| | || ||| | Sbjct 153228 AATCTTCACCCCGCTGAACTTTTTCCATAAACAAATCAGGAATCCATAATGCATAAAACA 153169 Query 54072 GATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 54131 |||||| | |||| |||||| || || ||||| | || || | ||| | | || Sbjct 153168 AATCTCTAGCTCTAACTTCCTCCTTACCATGGTTCTTCCTCAGGTCTAAGAATTCAAAAA 153109 Query 54132 TATCAGAATGCCACGGTTCCAAGTATATGGTCATAA--CTCCAGGCCGTTTGTTTCCTCC 54189 ||||| |||||| ||||| || ||||| || || | || || | || || || || Sbjct 153108 TATCACCATGCCAGGGTTCTAAATATAT--ACAAAAGGCACCCGGTCTCTTATTACCACC 153051 Query 54190 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 54249 |||||| | || | || || ||| ||||| ||||||| || | | ||| | || Sbjct 153050 CTGATCGACATACTTGGCAGTACTATCGAAAACTTTCAACATGGGCACCAGTCCACTTGA 152991 Query 54250 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATT 54294 | ||||||||| || | |||||| ||| | | ||| ||||| Sbjct 152990 AGTACCATTGGTACCTGCGATATATGATCCTGTAGAACGGATATT 152946 >seq3 Length=1585198 Score = 203 bits (224), Expect = 4e-47 Identities = 602/912 (66%), Gaps = 30/912 (3%) Strand=Plus/Minus Query 23828 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACC 23887 || |||||| || |||||||| || || | |||||||| || ||||| ||||| Sbjct 913963 AGCCATAACACCAGCCTTTTGGTAATCGGAAACTCTCTTTTCGAAGAAGTTAGTCTTACC 913904 Query 23888 TTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAA 23947 | || || || || |||||||| ||| |||| ||||||||||| || || | ||| | Sbjct 913903 AGCCAAGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTAACATTGTAAATCTTCTTACA 913844 Query 23948 TCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACA 24007 || | || | |||||||| ||||| || || | ||| ||| | ||||| Sbjct 913843 ACCGAGGGCAACTAATAATCTATCAGCGACGAATTCAACGTATTGACACATTAAATCACA 913784 Query 24008 ATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGA 24066 ||||| |||| | || ||||| | || | || ||| | |||| |||||| | Sbjct 913783 GTTCATACCTAATAACTTGACTGGCAAGGCATCGGTGAAGTATCTCTT-TTCAATGTCAA 913725 Query 24067 CCGCGTCTGTTATAATAGATCTTA----CTGTTTCTTCACTCGGTGGA-TACAAT--AAA 24119 | || || || || ||||||| | | |||| || |||| | || || Sbjct 913724 CAGCTTCGGTGAT----GATCTTAGCAACAATGCTTTCA-TC--TGGAGTGTTATTCAAG 913672 Query 24120 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 24179 || |||| | ||| || || || ||||| ||| || ||||||| || |||||| Sbjct 913671 TGAGAGAACAATAGACAAGCAAAGTCAGTGTGTAAACCTTCATCTCTACAGATGAATTCG 913612 Query 24180 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 24239 || || || || | || ||||||| || | ||| || | ||| || ||||| ||||| Sbjct 913611 TTAGAGAAAGTTAAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATGGAAGCAAAG 913552 Query 24240 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCC--ATAAC 24297 || ||||| ||||| || || || || || || ||||||| | |||||| || |||| Sbjct 913551 GAACCAGAGAAGAAGATACCCTCAACGGCAGCGAAGGCAACCAATCTTTCACCGAATAA- 913493 Query 24298 CGGCGCTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA 24354 ||| |||| ||||| || ||||| || ||||| | | | | ||| || | Sbjct 913492 -GGCTTCATCATCGGAGATCCATCTTAAGGCCCATTCAGCCTTTTCTCTAATACATGGGA 913434 Query 24355 T-TGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCA 24413 | ||| || || || || || | || | ||| || ||| ||||| || || || Sbjct 913433 TGTGT-TCAATGGCGTTGAATAAGTAATCAGCTTCCTTTGGATCCTTAACGTAAGTGTCG 913375 Query 24414 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAA 24473 ||||| | || | || || || |||||||| || ||||| || ||||||||| Sbjct 913374 ATCAATAAGGAGTAAGTCTCAGAGTGTATGTTTTCCATCATGATTTGGAAACCGTAGAAA 913315 Query 24474 CATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACT 24533 ||| | || || | || || ||||| | | || ||| | ||||||||||| || Sbjct 913314 CATTTGGCTTCTGGGATTTGCACTTCAGCAGAGAAGTTTTCAACCAAATTTTCATTGACA 913255 Query 24534 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGT 24593 || || ||| || || || || || || || || || ||| |||||| || Sbjct 913254 ATACCATCAGATGCAGCGAAGAAGGCTAACACTCTAGAGATGAAGTATCTTTCGT-TGTC 913196 Query 24594 GTT-AGT---TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCA 24649 || | | || ||||| || | | || || |||| ||| | |||||| | ||||| Sbjct 913195 ATTCAATCTGTTGTTCCAGTCGTGTAAGTCCTTGGATAAATCAATTTCTTCGGCAGTCCA 913136 Query 24650 AAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAAT 24709 || || || || ||||| || ||||| | |||||| || ||||||| ||||| || | Sbjct 913135 GAAGGAAGCTTCGGCCTTCTTGTACATTTGCCAGATCTCGTGATATTTGATTGGGAATAA 913076 Query 24710 AACAAATCTATT 24721 || ||||| || Sbjct 913075 GACGAATCTCTT 913064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721429305040