Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq12 158 8e-34 >seq12 Length=324105 Score = 158 bits (174), Expect = 8e-34 Identities = 402/604 (67%), Gaps = 26/604 (4%) Strand=Plus/Minus Query 97048 GCATCAATGTGATTCACA-TAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGG 97106 ||||||| ||||| |||| || | |||| ||| || | ||||||||| ||||| || || Sbjct 267156 GCATCAACGTGAT-CACAGTACACATGAGAATCACCCATAGTGTGAATGAATTCACCTGG 267098 Query 97107 AACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAA 97166 | | ||| | || || ||||| |||| |||| ||||| ||||| || || Sbjct 267097 TTCCATATCCACAATGTGAGCAATCATGTAAGTCAATAATGAATAAGATGCAATATTGAA 267038 Query 97167 AGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGA-AAGCTT----- 97220 |||||| |||| |||||||||| ||||||||||| | ||||| || || ||| Sbjct 267037 AGGCACACCTAATCCCATATCACAAGATCTTTGATACATTTGACATGATAATCTTGGTTT 266978 Query 97221 ---TCCATCACA---------CACATAAAACTGACTCAATACATGACAGGGGGGCAACGC 97268 |||||| |||||| || |||| || |||||||| || || || || Sbjct 266977 ACCTCCATCTTTTGGGAAGTTCACATAGAATTGACAAAACACATGACATGGTGGTAATGC 266918 Query 97269 CATTTT-TGGAACATCTAAGAC-ATTCCAAGCACACATCAACATTCTTCTATCGGTTGGG 97326 ||||| | ||| | | | |||||| ||| | | | |||||||||||| ||| Sbjct 266917 CATTTCCTTGAA--TGCAGGTGGATTCCATGCAGATAAAATAATTCTTCTATCGTATGGA 266860 Query 97327 TTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCA-ACGCCTTCTCCACCATAATT 97385 || | | | |||| ||| || | |||||||||| || |||| ||| |||| Sbjct 266859 TTATTTTTCAAAGTATCAATAATTTTAGCTAATTGATCATACCCCTTA-CCAGAGTAATC 266801 Query 97386 GTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCC 97445 | | | || ||| ||||| ||||| || |||||||||||||||||||| || || Sbjct 266800 AGCATCACAATCTGTATACTCTGCACCAAAGTGTCTCCATTGGAATCCATAAACTGGACC 266741 Query 97446 AAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATT 97505 | || |||||| ||| ||| || || | |||||||| |||||||| || Sbjct 266740 TAAATCGCCTTCTCTTCTTTCAGTTAATCCTAAAGAGTCTAAATATTCTCTAGATCCGTT 266681 Query 97506 TGCATCCCAAATGTGCACACCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGAT 97565 |||||||||| | |||||| |||| | ||| | || || ||||| | Sbjct 266680 ACCATCCCAAATTTTCACACCTTGAGCTGATAATAATTTCCCATCTGTTGATCCAGAAAC 266621 Query 97566 AAACCACAACAATTCTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGG 97625 |||||||| |||||| | | | | | | || |||||| |||||||| | ||| Sbjct 266620 GAACCACAATAATTCTAATAAGATAGCCTTGAAGAAAGTTCTCTTGGTTGTTAATAAAGG 266561 Query 97626 AAAA 97629 ||| Sbjct 266560 GAAA 266557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783902792110