Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq12 190 3e-43 seq14 172 8e-38 seq3 138 2e-27 seq5 113 7e-20 >seq12 Length=324105 Score = 190 bits (210), Expect = 3e-43 Identities = 389/569 (68%), Gaps = 23/569 (4%) Strand=Plus/Minus Query 205362 TTGtttttttAATCCATTAATATGATTAACATATATATGTGCATTACCAATATTATGAAT 205421 ||||| ||| ||| ||| || |||| | || | ||| | || ||| ||| | ||||| Sbjct 267169 TTGTTCTTTCAATGCATCAACGTGATCACAGTACACATGAGAATCACCCATAGTGTGAAT 267110 Query 205422 AAATTCATATGGTTTTAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATAACT 205481 |||||| ||||| | || | || |||||||| ||||||||||| |||| Sbjct 267109 GAATTCACCTGGTTCCATATCCACAATGTGAGCAATCATGTAAGTCAATAATGAATAAGA 267050 Query 205482 AGCAACATTAAATGGTACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATG- 205540 |||| ||| || || |||||||| ||||||||| |||||||||||||||||||||| Sbjct 267049 TGCAATATTGAAAGGCACACCTAATCCCATATCACAAGATCTTTGATACATTTGACATGA 266990 Query 205541 TAAGATA--TTTAT-------TATT----AATT-ACATGAAATTGTACAAAACA-ATGAC 205585 ||| | |||| | || | || |||| ||||| |||||||| ||||| Sbjct 266989 TAATCTTGGTTTACCTCCATCTTTTGGGAAGTTCACATAGAATTG-ACAAAACACATGAC 266931 Query 205586 AAGGTGGTATAACCATATT-TTCAA--CATCTATAGGATTCCAGGCTGTTAATATTATAT 205642 | ||||||| |||| | || || || | |||||||| || | ||| || || Sbjct 266930 ATGGTGGTAATGCCATTTCCTTGAATGCAGGT---GGATTCCATGCAGATAAAATAATTC 266874 Query 205643 TTCTAGATTCAGGtttattttttattttatttatAATATGTGTTAATTGATCAAATCCTT 205702 ||||| | || |||||||| | ||| ||||| | | |||||||||| | || | Sbjct 266873 TTCTATCGTATGGATTATTTTTCAAAGTATCAATAATTTTAGCTAATTGATCATACCCCT 266814 Query 205703 GATTTGTATAATTTGTATCCATATCAATATATTTAGCACCAAAATGACGCCATTGAAAAC 205762 | | |||| | ||| ||| |||| | |||||||| || | |||||| || | Sbjct 266813 TACCAGAGTAATCAGCATCACAATCTGTATACTCTGCACCAAAGTGTCTCCATTGGAATC 266754 Query 205763 CATAAACTGGACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttatatatt 205822 ||||||||||||||||||| |||||| |||| ||| | || || | || ||||| Sbjct 266753 CATAAACTGGACCTAAATCGCCTTCTCTTCTTTCAGTTAATCCTAAAGAGTCTAAATATT 266694 Query 205823 ttaatgatccattttcatcccaaatatggattcctttattttttaGAATATTTGTATTAG 205882 | ||||| || |||||||||| | | |||| | | || | || || | Sbjct 266693 CTCTAGATCCGTTACCATCCCAAATTTTCACACCTTGAGCTGATAATAATTTCCCATCTG 266634 Query 205883 TTGATCCAGATATAAACCATAATAATTCT 205911 |||||||||| | ||||| ||||||||| Sbjct 266633 TTGATCCAGAAACGAACCACAATAATTCT 266605 >seq14 Length=138463 Score = 172 bits (190), Expect = 8e-38 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| |||| || || || || ||| ||||| ||||| | | Sbjct 121010 ATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTAGAGGTTGAATCCTCT 120951 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || || ||||||||||| |||||||| |||||||||||| Sbjct 120950 GACACTATTGACAATGTCAAGTCTAAGATTCAAGATAAGGAAGGTATCCCACCTGATCAA 120891 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | || ||||| || || |||||||| ||| || |||| ||| ||||| || Sbjct 120890 CAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGATTACAAC 120831 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||| |||||||| ||||| ||||||||| | || |||||||||| Sbjct 120830 ATTCAAAAGGAATCAACCTTGCACTTGGTTTTAAGATTGAGAGGTGGTAT 120781 >seq3 Length=1585198 Score = 138 bits (152), Expect = 2e-27 Identities = 172/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| ||||||| || || || ||| ||||| | ||| | | Sbjct 1231334 ATGCAAATTTTTGTTAAGACCTTAACAGGTAAGACCATCACTTTAGAGGTCGAATCCTCT 1231393 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || || || ||||| || |||||||| |||||||||||| Sbjct 1231394 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGATCAA 1231453 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | || || || || || |||||||| || || |||| || ||||| || Sbjct 1231454 CAAAGATTGATCTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTGTCCGATTACAAC 1231513 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 || ||||| ||||| ||||| || ||||| ||| | || |||||||| ||| || Sbjct 1231514 ATCCAAAAGGAATCCACTTTACACTTGGTCTTAAGATTGAGAGGTGGTGGTAAGAA 1231569 >seq5 Length=915096 Score = 113 bits (124), Expect = 7e-20 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 124582 TAGAGATTGAAGCAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAG 124641 || || ||||| | |||||| ||| ||| | ||| ||||| ||||| || |||| Sbjct 587749 TATAGGTTGAATCCTCTGATACCATTGACAATGTCAAATCTAAAATCCAAGACAAGGAAG 587690 Query 124642 GTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAA 124701 |||| ||||| ||||||||||| | || ||||| || || |||||||| ||| || ||| Sbjct 587689 GTATCCCACCAGATCAACAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAA 587630 Query 124702 CATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAG 124761 | | || || || || ||||| ||||| || ||||| ||||| || | ||| ||| Sbjct 587629 CTCTTTCCGACTACAACATCCAAAAGGAATCCACCTTGCACTTGGTCTTGAGATTAAGAG 587570 Query 124762 GTGGT 124766 ||||| Sbjct 587569 GTGGT 587565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755455782806400