Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016-
03-01] 23 sequences; 12,320,962 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq12 190 3e-43
seq14 172 8e-38
seq3 138 2e-27
seq5 113 7e-20
>seq12
Length=324105
Score = 190 bits (210), Expect = 3e-43
Identities = 389/569 (68%), Gaps = 23/569 (4%)
Strand=Plus/Minus
Query 205362 TTGtttttttAATCCATTAATATGATTAACATATATATGTGCATTACCAATATTATGAAT 205421
||||| ||| ||| ||| || |||| | || | ||| | || ||| ||| | |||||
Sbjct 267169 TTGTTCTTTCAATGCATCAACGTGATCACAGTACACATGAGAATCACCCATAGTGTGAAT 267110
Query 205422 AAATTCATATGGTTTTAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATAACT 205481
|||||| ||||| | || | || |||||||| ||||||||||| ||||
Sbjct 267109 GAATTCACCTGGTTCCATATCCACAATGTGAGCAATCATGTAAGTCAATAATGAATAAGA 267050
Query 205482 AGCAACATTAAATGGTACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATG- 205540
|||| ||| || || |||||||| ||||||||| ||||||||||||||||||||||
Sbjct 267049 TGCAATATTGAAAGGCACACCTAATCCCATATCACAAGATCTTTGATACATTTGACATGA 266990
Query 205541 TAAGATA--TTTAT-------TATT----AATT-ACATGAAATTGTACAAAACA-ATGAC 205585
||| | |||| | || | || |||| ||||| |||||||| |||||
Sbjct 266989 TAATCTTGGTTTACCTCCATCTTTTGGGAAGTTCACATAGAATTG-ACAAAACACATGAC 266931
Query 205586 AAGGTGGTATAACCATATT-TTCAA--CATCTATAGGATTCCAGGCTGTTAATATTATAT 205642
| ||||||| |||| | || || || | |||||||| || | ||| || ||
Sbjct 266930 ATGGTGGTAATGCCATTTCCTTGAATGCAGGT---GGATTCCATGCAGATAAAATAATTC 266874
Query 205643 TTCTAGATTCAGGtttattttttattttatttatAATATGTGTTAATTGATCAAATCCTT 205702
||||| | || |||||||| | ||| ||||| | | |||||||||| | || |
Sbjct 266873 TTCTATCGTATGGATTATTTTTCAAAGTATCAATAATTTTAGCTAATTGATCATACCCCT 266814
Query 205703 GATTTGTATAATTTGTATCCATATCAATATATTTAGCACCAAAATGACGCCATTGAAAAC 205762
| | |||| | ||| ||| |||| | |||||||| || | |||||| || |
Sbjct 266813 TACCAGAGTAATCAGCATCACAATCTGTATACTCTGCACCAAAGTGTCTCCATTGGAATC 266754
Query 205763 CATAAACTGGACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttatatatt 205822
||||||||||||||||||| |||||| |||| ||| | || || | || |||||
Sbjct 266753 CATAAACTGGACCTAAATCGCCTTCTCTTCTTTCAGTTAATCCTAAAGAGTCTAAATATT 266694
Query 205823 ttaatgatccattttcatcccaaatatggattcctttattttttaGAATATTTGTATTAG 205882
| ||||| || |||||||||| | | |||| | | || | || || |
Sbjct 266693 CTCTAGATCCGTTACCATCCCAAATTTTCACACCTTGAGCTGATAATAATTTCCCATCTG 266634
Query 205883 TTGATCCAGATATAAACCATAATAATTCT 205911
|||||||||| | ||||| |||||||||
Sbjct 266633 TTGATCCAGAAACGAACCACAATAATTCT 266605
>seq14
Length=138463
Score = 172 bits (190), Expect = 8e-38
Identities = 176/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | ||||| |||| || || || || ||| ||||| ||||| | |
Sbjct 121010 ATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTAGAGGTTGAATCCTCT 120951
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| ||| | || || ||||||||||| |||||||| ||||||||||||
Sbjct 120950 GACACTATTGACAATGTCAAGTCTAAGATTCAAGATAAGGAAGGTATCCCACCTGATCAA 120891
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | || ||||| || || |||||||| ||| || |||| ||| ||||| ||
Sbjct 120890 CAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGATTACAAC 120831
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|||||||| |||||||| ||||| ||||||||| | || ||||||||||
Sbjct 120830 ATTCAAAAGGAATCAACCTTGCACTTGGTTTTAAGATTGAGAGGTGGTAT 120781
>seq3
Length=1585198
Score = 138 bits (152), Expect = 2e-27
Identities = 172/236 (73%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| ||| | ||||| ||||||| || || || ||| ||||| | ||| | |
Sbjct 1231334 ATGCAAATTTTTGTTAAGACCTTAACAGGTAAGACCATCACTTTAGAGGTCGAATCCTCT 1231393
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| ||| | || || || ||||| || |||||||| ||||||||||||
Sbjct 1231394 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGATCAA 1231453
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | || || || || || |||||||| || || |||| || ||||| ||
Sbjct 1231454 CAAAGATTGATCTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTGTCCGATTACAAC 1231513
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774
|| ||||| ||||| ||||| || ||||| ||| | || |||||||| ||| ||
Sbjct 1231514 ATCCAAAAGGAATCCACTTTACACTTGGTCTTAAGATTGAGAGGTGGTGGTAAGAA 1231569
>seq5
Length=915096
Score = 113 bits (124), Expect = 7e-20
Identities = 136/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 124582 TAGAGATTGAAGCAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAG 124641
|| || ||||| | |||||| ||| ||| | ||| ||||| ||||| || ||||
Sbjct 587749 TATAGGTTGAATCCTCTGATACCATTGACAATGTCAAATCTAAAATCCAAGACAAGGAAG 587690
Query 124642 GTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAA 124701
|||| ||||| ||||||||||| | || ||||| || || |||||||| ||| || |||
Sbjct 587689 GTATCCCACCAGATCAACAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAA 587630
Query 124702 CATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAG 124761
| | || || || || ||||| ||||| || ||||| ||||| || | ||| |||
Sbjct 587629 CTCTTTCCGACTACAACATCCAAAAGGAATCCACCTTGCACTTGGTCTTGAGATTAAGAG 587570
Query 124762 GTGGT 124766
|||||
Sbjct 587569 GTGGT 587565
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755455782806400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |