Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq3 217 1e-51 >seq3 Length=1585198 Score = 217 bits (240), Expect = 1e-51 Identities = 574/861 (67%), Gaps = 23/861 (3%) Strand=Plus/Minus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 ||||| || || |||||||||||| ||||| || || || || | || || || || Sbjct 913947 TTTTGGTAATCGGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCAGCCAAGGAGATGTTC 913888 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTAT---TTATCGCATCCCAATTCCAAC 16060 ||||| || || || || || | |||| | ||| || | || || | | | Sbjct 913887 TCCATGAAGTCGAATGGGTTGGT--AACATT-GTAAATCTTCTTACAACCGAGGGCAACT 913831 Query 16061 AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATT 16120 ||||||||||| || || ||||| | || || |||||||||||||||||| |||| | Sbjct 913830 AATAATCTATCAGCGACGAATTCAACGTATTGACACATTAAATCACAGTTCATACCTAAT 913771 Query 16121 AATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATT 16180 || || || || | || || || || | | ||||| || | ||| ||||| |||| Sbjct 913770 AACTTGACTGGCAAGGCATCGGTGAAGTATCTCTTTTCAATGTCAACAGCTTCGGTGATG 913711 Query 16181 ATATCTCTTA-CTACACTATTT--AAC-GGAGGGTTTAATAAGTGTTTAAACATTATACA 16236 || |||| | ||| | || | | |||| ||| ||||| |||| || ||| Sbjct 913710 AT----CTTAGCAACAATGCTTTCATCTGGAGTGTTATTCAAGTGAGAGAACAATAGACA 913655 Query 16237 AGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACC 16296 |||||| ||| || || ||||| || |||| || || ||||| || || || | ||| Sbjct 913654 AGCAAAGTCAGTGTGTAAACCTTCATCTCTACAGATGAATTCGTTAGAGAAAGTTAAACC 913595 Query 16297 TGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATAT 16356 |||||||| |||| || || | ||| || || | ||||| |||||||| ||||| || Sbjct 913594 TGGCATTAAACCTCTCTTCTTCAACCAGAAGATGGAAGCAAAGGAACCAGAGAAGAAGAT 913535 Query 16357 ACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCG--TACGTTCTAtttttactttct 16414 ||| ||||| || || || |||||||||| |||||| || | || | | | Sbjct 913534 ACCCTCAACGGCAGCGAAGGCAACCAATCTTTCACCGAATAAG-GCT-TCATCATCGGAG 913477 Query 16415 atccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTA 16474 |||||| || ||||| | || |||| | ||| ||| |||| || || || || Sbjct 913476 ATCCATCTTAAGGCCCATTCAGCCTTTTCTCTAATACATGGGATGTGTTCAATGGCGTTG 913417 Query 16475 AATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATT 16534 ||||| |||| ||| || ||| || ||||| || || | ||| || | Sbjct 913416 AATAAGTAATCAGCTTCCTTTGGATCCTTAACGTAAGTGTCGATCAATAAGGAGTAAGTC 913357 Query 16535 TCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATT 16594 || || || || || ||||| || || ||||| || || ||| | ||||| | ||| Sbjct 913356 TCAGAGTGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCTGGGATT 913297 Query 16595 TGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCA 16654 || ||||||| | || |||| | || ||||| || || || ||||| || || Sbjct 913296 TGCACTTCAGCAGAGAAGTTTTCAACCAAATTTTCATTGACAATACCATCAGATGCAGCG 913237 Query 16655 AAAAACGCAAGTATGTGTTTA-ATAAAAtttttttCGTTATC--TGAAAGT-TTTAACCA 16710 || || || | | | | | || || | | ||||||| || | || | || ||| Sbjct 913236 AAGAAGGCTAACA-CTCTAGAGATGAAGTATCTTTCGTTGTCATTCAATCTGTTGTTCCA 913178 Query 16711 GTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTT 16770 ||| || || || |||||||| | ||||| ||||||| || ||||| | ||||| Sbjct 913177 GTCGTGTAAGTCCTTGGATAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTCGGCCTT 913118 Query 16771 TTTATACATTTTCCATATGTC 16791 || ||||||| ||| || || Sbjct 913117 CTTGTACATTTGCCAGATCTC 913097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511867027800