Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq12 107 3e-18 seq10 89.7 7e-13 >seq12 Length=324105 Score = 107 bits (118), Expect = 3e-18 Identities = 241/352 (68%), Gaps = 19/352 (5%) Strand=Plus/Plus Query 104404 GATTTAGGACCTATTTATGGTTTTCAGTGGAGACATTATGGTGAAAATTATATTGGGTGC 104463 |||||||| || ||||||| || || |||||||| | ||||| | | |||| | || Sbjct 266735 GATTTAGGTCCAGTTTATGGATTCCAATGGAGACACTTTGGTGCAGAGTATACAGATTGT 266794 Query 104464 GATAATAAATA---TGGT----GGTATAGATCAACTCAAAAATATTATTACAACAATTCA 104516 ||| | | || |||| ||||| |||||| | || |||||| || | | Sbjct 266795 GATGCTGATTACTCTGGTAAGGGGTAT-GATCAATTAGCTAAAATTATTGATACTTTGAA 266853 Query 104517 AAATGAACCTTGGGATAGAAGAATGATATTATTAGCTTGGAACCCAAAGGATAATTCTA- 104575 |||| | || | ||||||||||| || |||| || ||||| ||| | |||| | Sbjct 266854 AAATAATCCATACGATAGAAGAATTATTTTATCTGCATGGAATCCACCTG--CATTCAAG 266911 Query 104576 -AAATGGCACTTCCTCCTTGTCAT-TGTATAGCACATTTTGATGT-AAGTTC---AAAAA 104629 |||||||| | || || |||||| ||| | | || || |||| || ||| ||| | Sbjct 266912 GAAATGGCATTACCACCATGTCATGTGTTTTG-TCAATTCTATGTGAACTTCCCAAAAGA 266970 Query 104630 TAAATGGTAAAAGAGAATTGTCTTGTCATTTATTTCAAAGATCTGCAGATATGGGGTTGG 104689 | | |||||| | ||| || ||||| | | |||||||||| |||||||| || | Sbjct 266971 TGGA-GGTAAACCAAGATTATCATGTCAAATGTATCAAAGATCTTGTGATATGGGATTAG 267029 Query 104690 GAGTTCCTTTTAACATAGCAAGTTATGCATTATTAACACATATAATAGCTCA 104741 | || ||||| || || ||| |||| ||||||| || | || || ||||| Sbjct 267030 GTGTGCCTTTCAATATTGCATCTTATTCATTATTGACTTACATGATTGCTCA 267081 >seq10 Length=448533 Score = 89.7 bits (98), Expect = 7e-13 Identities = 141/203 (69%), Gaps = 12/203 (6%) Strand=Plus/Plus Query 188908 CCATGTACAAGCATACAATCTTTTTCCATTTCTCCGATTCTTAAACCTCCTTCATTTGCT 188967 ||||| ||| |||||||||| | ||||| || |||| |||||| || || || | ||| Sbjct 398579 CCATGAGCAATCATACAATCTCTCTCCATCTCACCGAATCTTAACCCACCATCTCTGGCT 398638 Query 188968 CTCCCGTTTAGTGGTTGCCTAGTAATTGCATGTCGTTTTTGGTTTGTACTT---GCTCTT 189024 || || | | ||||| ||||| | ||||| | || || | ||||| Sbjct 398639 CTACCTTCCATAGGTTGTCTAGTCAAA---------TTTTGATATGGACCTCTAGCTCTA 398689 Query 189025 GAAAATATTTTATCTGATACCATGTGCGTCAATCTGTGGTAATATACTGGTCCAAAGAAG 189084 | | |||||||| |||||||| ||||||| || ||||| ||| |||||||| Sbjct 398690 GCATGGATTTTATCATCAACCATGTGTCTCAATCTTTGATAATAAGTTGGACCAAAGAAA 398749 Query 189085 ATTTCTGCTCTAAGTTTTTTACC 189107 | || ||| ||||||||||||| Sbjct 398750 ACTTGTGCCATAAGTTTTTTACC 398772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679814204553360