Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq14 107 1e-18 seq3 100 2e-16 seq5 86.0 5e-12 >seq14 Length=138463 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| | |||||||| |||||||||||||| || | | ||| ||| |||||| Sbjct 120802 ACCAAGTGCAAGGTTGATTCCTTTTGAATGTTGTAATCAGATAAAGTTCTACCATCTTCT 120861 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 ||||| || || ||| |||| | |||||||||||| || | ||||||||||| | Sbjct 120862 AATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGGATACCTTCCTTATCTTGA 120921 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| ||||||| || || || | |||||| | || Sbjct 120922 ATCTTAGACTTGACATTGTCAATAGTGTCAGAGGATTCAACCTCTAAAGTGATGGTCTTA 120981 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || || || || || || ||||||||||| Sbjct 120982 CCAGTTAAGGTCTTAACGAAAATTTGCAT 121010 >seq3 Length=1585198 Score = 100 bits (110), Expect = 2e-16 Identities = 153/217 (71%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 18112 TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAAT 18171 |||| |||| ||| | || ||||| ||||| |||||||| |||| || ||| ||| | Sbjct 1231546 TAAG-ACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAATCGGACAAGGTTCTACCGT 1231488 Query 18172 CTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT 18231 |||| ||||| || || || |||| | |||||||||||| || | |||||||| | Sbjct 1231487 CTTCTAATTGCTTACCGGCGAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTGT 1231428 Query 18232 CGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291 | || | |||||| | ||| ||||||| || ||| || | |||||| Sbjct 1231427 CTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAGGATTCGACCTCTAAAGTGATGG 1231368 Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 | || || || || || || |||||||||||||| || Sbjct 1231367 TCTTACCTGTTAAGGTCTTAACAAAAATTTGCATGTT 1231331 >seq5 Length=915096 Score = 86.0 bits (94), Expect = 5e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 18096 TATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCG 18155 || || || | || ||| | |||| ||| | || ||||| ||||| |||||||||||| Sbjct 587563 TAACCACCTCTTAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCG 587622 Query 18156 GCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACG 18215 | | ||| ||| |||||| ||||| || || ||| |||| | |||||||||||| Sbjct 587623 GAAAGAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCTGGT 587682 Query 18216 GGCACGCCTTCCTTATC 18232 || | |||||||| || Sbjct 587683 GGGATACCTTCCTTGTC 587699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343893665135