Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016-
03-01] 23 sequences; 12,320,962 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq14 107 1e-18
seq3 100 2e-16
seq5 86.0 5e-12
>seq14
Length=138463
Score = 107 bits (118), Expect = 1e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | |||||||| |||||||||||||| || | | ||| ||| ||||||
Sbjct 120802 ACCAAGTGCAAGGTTGATTCCTTTTGAATGTTGTAATCAGATAAAGTTCTACCATCTTCT 120861
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| |||| | |||||||||||| || | ||||||||||| |
Sbjct 120862 AATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGGATACCTTCCTTATCTTGA 120921
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| ||||||| || || || | |||||| | ||
Sbjct 120922 ATCTTAGACTTGACATTGTCAATAGTGTCAGAGGATTCAACCTCTAAAGTGATGGTCTTA 120981
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| || || || || || |||||||||||
Sbjct 120982 CCAGTTAAGGTCTTAACGAAAATTTGCAT 121010
>seq3
Length=1585198
Score = 100 bits (110), Expect = 2e-16
Identities = 153/217 (71%), Gaps = 1/217 (0%)
Strand=Plus/Minus
Query 18112 TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAAT 18171
|||| |||| ||| | || ||||| ||||| |||||||| |||| || ||| ||| |
Sbjct 1231546 TAAG-ACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAATCGGACAAGGTTCTACCGT 1231488
Query 18172 CTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT 18231
|||| ||||| || || || |||| | |||||||||||| || | |||||||| |
Sbjct 1231487 CTTCTAATTGCTTACCGGCGAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTGT 1231428
Query 18232 CGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291
| || | |||||| | ||| ||||||| || ||| || | ||||||
Sbjct 1231427 CTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAGGATTCGACCTCTAAAGTGATGG 1231368
Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
| || || || || || || |||||||||||||| ||
Sbjct 1231367 TCTTACCTGTTAAGGTCTTAACAAAAATTTGCATGTT 1231331
>seq5
Length=915096
Score = 86.0 bits (94), Expect = 5e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 18096 TATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCG 18155
|| || || | || ||| | |||| ||| | || ||||| ||||| ||||||||||||
Sbjct 587563 TAACCACCTCTTAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCG 587622
Query 18156 GCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACG 18215
| | ||| ||| |||||| ||||| || || ||| |||| | ||||||||||||
Sbjct 587623 GAAAGAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCTGGT 587682
Query 18216 GGCACGCCTTCCTTATC 18232
|| | |||||||| ||
Sbjct 587683 GGGATACCTTCCTTGTC 587699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343893665135
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |