Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016-
03-01] 23 sequences; 12,320,962 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq5 172 5e-38
seq3 149 6e-31
seq14 84.2 2e-11
>seq5
Length=915096
Score = 172 bits (190), Expect = 5e-38
Identities = 424/641 (66%), Gaps = 4/641 (1%)
Strand=Plus/Plus
Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400
|||||| | |||| || | ||| || ||||||| || ||||| || | || |
Sbjct 39109 TTCAACTCTCTTCATGAATAAATCTGGGATCCATAAGGCTGGGAACAAATCTCTAGCTCT 39168
Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460
| || || || ||| ||||||| | | || | ||| || || | || || |||||
Sbjct 39169 GATTTCTTCCTTACCGTGGTTCTTTCTAATGTCAATAAAATCAAAGATATCAGCGTGCCA 39228
Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520
|| || | ||| | |||||| || || |||||||| || || || ||||| ||||| |
Sbjct 39229 TGGTTCAATGTACAAGGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAACGTATCT 39288
Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580
||| ||||||||| ||||||| | ||| || | || |||||| || | ||| ||
Sbjct 39289 GGCGGTGTTGTTGAACACTCTCACCATTGGAATGATACCGTTAGAGGTACCGTTAGTACC 39348
Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640
|| | ||||| | |||| | ||||| | ||| || || || || || | |
Sbjct 39349 AGCGATGTAAGAACCGGTAGCTCTGATATTGTGGATGTGTAACCCAATACCACCAGCGGT 39408
Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700
|| || |||| || |||| |||| ||| ||||| || || || ||| ||| || ||
Sbjct 39409 CTTAGAAATCAGAGCACATTCCTTCAAAGTATCGTAAATCCCTTCAATGGAGTCATCCTT 39468
Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760
| || || |||||||| ||||||||||| | | || ||| | || |||| ||
Sbjct 39469 CATGGCAACTAAGAAACAAGAAGACATTTGTGGGTGAGGAGTACCAGCATTAAACAAAGT 39528
Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820
|| ||||| || ||||||| | ||||| | ||| || || || || |
Sbjct 39529 TGGAGACGCGTGAGTGAAGTATCTCTCAGACATCAAATTATAGGTTTCAATCACCTTTGG 39588
Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG-- 23878
|| | || ||||| ||||| |||||||| | ||| | | | |||||||||||||
Sbjct 39589 GATATTATCACCGTGGATACCAATGGCGACTCTCATGGTTAAATGTTGAGGTCTCTCGGC 39648
Query 23879 ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAG 23938
| | | | |||| ||| | || | || || | || || || ||||| || |||||
Sbjct 39649 AACCTTA--CCGTCGATTCTTAATAAGTAAGATCTTTCCAAGGTCTTAAACCCGAAATAA 39706
Query 23939 TCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979
| ||| | || ||||| || | || || || || || ||
Sbjct 39707 TTATAACTGAAATCACGGTCATAAACGATAGCAGAGTTTAA 39747
>seq3
Length=1585198
Score = 149 bits (164), Expect = 6e-31
Identities = 578/891 (65%), Gaps = 23/891 (3%)
Strand=Plus/Plus
Query 57537 AGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAA 57596
||||| ||| | || || || |||||| || || ||| | |||||||| ||||| |||
Sbjct 913067 AGATTCGTCTTATTCCCAATCAAATATCACGAGATCTGGCAAATGTACAAGAAGGCCGAA 913126
Query 57597 GCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCC 57656
|| || || ||||| | ||||||| | || | || ||||| | ||| ||| | |
Sbjct 913127 GCTTCCTTCTGGACTGCCGAAGAAATTGATTTATCCAAGGACTTACACGACTGGAACAAC 913186
Query 57657 C---TCAAAGAATCTGAGAGAAATTTTAT-TAAACACGTGTTGGCGTTTTTCGCCGCATC 57712
| || || || ||| | || || | | | ||||| || || ||||| |||||
Sbjct 913187 AGATTGAATGACAACGAAAGATACTTCATCTCTAGA-GTGTTAGCCTTCTTCGCTGCATC 913245
Query 57713 CGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGA 57772
||||||||||| || || |||||||| |||| || || ||||||||| | | ||
Sbjct 913246 TGATGGTATTGTCAATGAAAATTTGGTTGAAAACTTCTCTGCTGAAGTGCAAATCCCAGA 913305
Query 57773 GGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTC 57832
|| | ||| || ||||| || ||| | || |||||| | || || || | || ||
Sbjct 913306 AGCCAAATGTTTCTACGGTTTCCAAATCATGATGGAAAACATACACTCTGAGACTTACTC 913365
Query 57833 GCTACTCATCGATACGTACGTGAAGGA--CAACGACGAGAAAC-GTAGAC-TGTTCAACG 57888
|| | ||||| || ||||| ||||| ||| | ||| | | || | |||||||
Sbjct 913366 CTTATTGATCGACACTTACGTTAAGGATCCAAAG----GAAGCTGATTACTTATTCAACG 913421
Query 57889 CGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAA 57948
| || ||| || || || | ||||| || ||| | | | ||||||
Sbjct 913422 CCATTGAACACATCCCATGTATTAGAGAAAAGGCTGAATGGGCCTTAAGATGGATCTCCG 913481
Query 57949 GCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCT 58008
| ||| |||| || || | | || ||||| ||||| || ||||| ||||
Sbjct 913482 ATGATGAAGCCTTATTCGGTGAAAGATTGGTTGCCTTCGCTGCCGTTGAGGGTATCTTCT 913541
Query 58009 TTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGA 58068
| || || |||||| | || || ||| ||||||| | || | ||||| || | |
Sbjct 913542 TCTCTGGTTCCTTTGCTTCCATCTTCTGGTTGAAGAAGAGAGGTTTAATGCCAGGTTTAA 913601
Query 58069 CGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAA 58128
| || ||||| || || | | || || ||| | || ||||| ||||| || |||
Sbjct 913602 CTTTCTCTAACGAATTCATCTGTAGAGATGAAGGTTTACACACTGACTTTGCTTGTCTAT 913661
Query 58129 TGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCA-TCTTG--GACATTATCACCG 58185
||| ||||||| ||| ||||| | | || ||| | ||| | || |||||||
Sbjct 913662 TGTTCTCTCAC-TTG--AATAACACTCCAGATGAAAGCATTGTTGCTAAGATCATCACCG 913718
Query 58186 AGGCGGTCGCGATCGAAAATGAG-TTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGT 58244
| || || | || ||||| ||| | ||||||| ||| | || || | | |||
Sbjct 913719 AAGCTGTTGACATTGAAAA-GAGATACTTCACCGATGCCTTGCCAGTCAAGTTATTAGGT 913777
Query 58245 ATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAA 58304
|||||| |||||| |||| | ||| |||| || || || || ||| | || | |
Sbjct 913778 ATGAACTGTGATTTAATGTGTCAATACGTTGAATTCGTCGCTGATAGATTATTAGTTGCC 913837
Query 58305 CT-GATTGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTC 58363
|| | ||| | || |||||| | || || || || || ||| | |||||
Sbjct 913838 CTCGGTTGTA-AGAAGATTTACAATGTTACCAACCCATTCGACTTCATGGAGAACATCTC 913896
Query 58364 GCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAA 58414
| | || ||||| ||||| |||||||| | |||| ||| || |||||
Sbjct 913897 CTTGGCTGGTAAGACTAACTTCTTCGAAAAGAGAGTTTCCGATTACCAAAA 913947
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|||||||||||||| || ||||| | ||||| || || ||||| | || || ||| |
Sbjct 1231331 AACATGCAAATTTTTGTTAAGACCTTAACAGGTAAGACCATCACTTTAGAGGTCGAATCC 1231390
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | | || | ||||| | || ||||||||||| | || || ||
Sbjct 1231391 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGAT 1231450
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | | || ||||| || || || || |||||| || || || ||||||
Sbjct 1231451 CAACAAAGATTGATCTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTGTCCGATTAC 1231510
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||| ||||| ||||| ||| | || |||| | ||| |||| || |||
Sbjct 1231511 AACATCCAAAAGGAATCCACTTTACACTTGGTCTTAAGATTGAGAGGTGGT 1231561
>seq14
Length=138463
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| | || || || || ||||| | || |||||| | ||
Sbjct 121010 ATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTAGAGGTTGAATCCTCT 120951
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | ||||| | || || |||||||| | || || || ||
Sbjct 120950 GACACTATTGACAATGTCAAGTCTAAGATTCAAGATAAGGAAGGTATCCCACCTGATCAA 120891
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | |||| || ||||| || || || ||||| || ||| | ||||| |||
Sbjct 120890 CAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGATTACAAC 120831
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||| ||||| || | || |||| | ||| |||| || ||||
Sbjct 120830 ATTCAAAAGGAATCAACCTTGCACTTGGTTTTAAGATTGAGAGGTGGTA 120782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766271842160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |