Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq3 161 2e-34 seq12 120 6e-22 >seq3 Length=1585198 Score = 161 bits (178), Expect = 2e-34 Identities = 306/443 (69%), Gaps = 13/443 (3%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||||||| ||||| ||||| || |||||||| |||| | || || ||||| |||||| Sbjct 913511 GTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGTTCCTTTGCTTCCATCTTCTGG 913570 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| || ||| | |||| ||| | || | ||| || || ||||| | ||| || Sbjct 913571 TTGAAGAAGAGAGGTTTAATGCCAGGTTTAACTTTCTCTAACGAATTCATCTGTAGAGAT 913630 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 |||||| | || |||||||| || | |||| | ||| ||| | | Sbjct 913631 GAAGGTTTACACACTGACTTTGCTTGTCTATTGTTCTCTCAC----TTGA--ATAACAC- 913683 Query 102098 TCAAGA-GAAAGGATTCTTG---AAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATT 102153 || ||| ||||| ||| ||| | || |||| ||||| || |||||| |||| | Sbjct 913684 TCCAGATGAAAGCATTGTTGCTAAGATCATCACCGAAGCTGTTGACATTGAA-AAGAGAT 913742 Query 102154 TCT-CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGT 102212 || ||| | | || |||| || || ||| | || |||||||| | || ||| | || | Sbjct 913743 ACTTCACCGATGCCTTGCCAGTCAAGTTATTAGGTATGAACTGTGATTTAATGTGTCAAT 913802 Query 102213 ACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATG 102272 || ||||||| || || |||| | |||| |||| | || | ||| || |||| Sbjct 913803 ACGTTGAATTCGTCGCTGATAGATTATTAGTTGCCCTCGGTTGTAAGAAGATTTACAATG 913862 Query 102273 TTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTG 102332 |||||||||| ||| |||||||| || || ||| | | |||||| ||||| || | Sbjct 913863 TTACCAACCCATTCGACTTCATGGAGAACATCTCCTTGGCTGGTAAGACTAACTTCTTCG 913922 Query 102333 AAAAGAGAGTCGCCGAGTATCAA 102355 |||||||||| |||| || ||| Sbjct 913923 AAAAGAGAGTTTCCGATTACCAA 913945 >seq12 Length=324105 Score = 120 bits (132), Expect = 6e-22 Identities = 357/545 (66%), Gaps = 28/545 (5%) Strand=Plus/Plus Query 35333 ATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCA 35392 || ||| | | ||| || || | |||| ||| ||| | ||| ||| || ||| | Sbjct 266669 ATTTGGGATGGTAACGGATCTAGAGAATATTTAGACTCTTTAGGATTAACTGAAAGAAGA 266728 Query 35393 GAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATAT--- 35449 || || ||||| || || || || |||||||||||| | || |||||||| || ||| Sbjct 266729 GAAGGCGATTTAGGTCCAGTTTATGGATTCCAATGGAGACACTTTGGTGCAGAGTATACA 266788 Query 35450 GATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAG 35509 ||| ||| | | ||||| |||| ||||| ||||||||| || || || | | Sbjct 266789 GAT---TGTGATGCTGATTACTCTGGTAAGGGGTATGATCAATTAGCTAAAATTATTGAT 266845 Query 35510 ACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCC-TATGGA 35568 || ||| | | |||||| | |||||||| || ||| | | ||||||||||| || | Sbjct 266846 ACTTTGAAAAATAATCCATACGATAGAAGAATTATTTTATCTGCATGGAATCCACCTGCA 266905 Query 35569 TCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTG-GCT---- 35623 | | | ||||| | || ||||| || || | |||||| |||||| || Sbjct 266906 T-TCAAGGAAATGGCATTACCACCATGTCATGTGTTTTGTCAATTCTATGTGAACTTCCC 266964 Query 35624 ----AATGGAG---------AATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGG 35670 |||||| ||| || || || ||||||| || | ||| | || Sbjct 266965 AAAAGATGGAGGTAAACCAAGATTATCATGTCAAATGTATCAAAGATCTTGTGATATGGG 267024 Query 35671 GTTGGGCGTGCCCTTCAATATTGCATCATACTCTCTTCTGACTCATCTGATGGCCAGTAT 35730 || || ||||| |||||||||||||| || || | ||||| | |||| || || Sbjct 267025 ATTAGGTGTGCCTTTCAATATTGCATCTTATTCATTATTGACTTACATGATTGCTCACAT 267084 Query 35731 GGTGGGTCTAAAACCGGGAGAGTTTATCCTCACTCTTGGTGACGCACACATTTATAATAC 35790 |||| | | |||| || || || || | |||| | ||||| | || | || | Sbjct 267085 TGTGGATATGGAACCAGGTGAATTCATTCACACTATGGGTGATTCTCATGTGTACTGTGA 267144 Query 35791 CCACATTGAGGTGTT-AAAGAAGCAGTTGTGCCGCGTCCCTAGACCATTCCCTAAGTTGA 35849 ||| |||| | || |||||| || || | | || |||||| |||||||||| |||| Sbjct 267145 TCACGTTGATGCATTGAAAGAA-CAAATGAGTAGAGTGCCTAGAGCATTCCCTAAATTGA 267203 Query 35850 GGATT 35854 |||| Sbjct 267204 AGATT 267208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583708381965