Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq5 347 2e-90 seq3 215 7e-51 >seq5 Length=915096 Score = 347 bits (384), Expect = 2e-90 Identities = 1363/2123 (64%), Gaps = 45/2123 (2%) Strand=Plus/Plus Query 64830 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 64889 || || | |||||||||||||| ||||| |||| || || | | |||||||| || Sbjct 37868 TTATCAACTGTGAATTGAATGGCAGCGGCGGCGGCTTGAGTTCTCAAGTAGTACATACCG 37927 Query 64890 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 64949 || |||| ||| |||| ||||| || ||||| || | || | | ||| Sbjct 37928 GTCTTTAAACCCTTCTTCCAACCGTAGAAGTGCATGGAAGTCAACTTACCCATAGTTGGA 37987 Query 64950 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 65009 || | ||||| |||||||||||| |||||| | | | || || ||||| |||| | Sbjct 37988 GCTCTCAAGTGGATGTTCATAGATTGAGATTGATCAACGTAAGCACCTCTGTCAGCAGAC 38047 Query 65010 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 65069 || | ||||| | |||||| | ||||||||||| || ||||| | | | || | || Sbjct 38048 ATATCAATGATAGACTTTTGAGAAATTTCCCAAACGGTCTTATACAATTGTTTTAATTCA 38107 Query 65070 TCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATC 65126 || |||| ||||| || |||||||| ||| ||| | ||||| ||||| || Sbjct 38108 TCAGGAACGTTTGGCAAGTTTTGAATGGAACCATTATCAGAAATAATGTGGTTCTTCATA 38167 Query 65127 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 65186 |||| ||||||| || ||| |||| | | | || ||||| | ||| Sbjct 38168 GAGTCATCCCATAATCCAAGGTCAACCAAATCTCTCAACAAGTATGGGTTAACAATTTGG 38227 Query 65187 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 65246 ||||| |||| | ||||| | || ||||||||| || || ||||| | | | ||| Sbjct 38228 AATTCACCAGCTAGCACTCTTCTAGAGTAAATATTGGAAGTGTATGGTTCGAAACATTCA 38287 Query 65247 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 65306 || | ||||| ||||| | ||| || ||||| ||||| || || | ||||| ||| Sbjct 38288 TTGTAACCCAAGATTTGGGAAGTAGAAGCAGTTGGCATTGGAGCAAGTAATAAGGAGTTT 38347 Query 65307 CTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGT-TCCCAATTCCAAAGATCCGACGG 65365 || | ||| | || ||||| | || || | || | ||||| | ||| | ||| | || Sbjct 38348 CTTAAACCATTGGTCATGATTCTTTCCTTCA-AGTTATCCCAGTCCCATAAATCAGTTGG 38406 Query 65366 --TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 65423 | || ||| | ||||| | || || ||| || | Sbjct 38407 CTTCTTACCCCATAAATCGAA--TTGCAAGATACCTTGGGAAGCTGGAGAACCTTCAAAA 38464 Query 65424 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 65483 || || || ||||| | |||| ||| |||||||| ||||| | ||| Sbjct 38465 GTTTCATACTTACCTTCTTCGATGGCTAATTCGACGGAGGCCTCTAAAGCACCATGGTAA 38524 Query 65484 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT 65543 | |||||| ||||| | | |||| || ||||| | ||||||||| | | | Sbjct 38525 AGGGTTTCAAAGATTTGAATGTTTAACAATTTAGCTTCTGGAGAGTCAAATGGA-ATTCT 38583 Query 65544 AAGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 65602 || | || || || || ||||| ||||||||||||| | |||||||| | |||| | Sbjct 38584 CAGTAACATGAATGCATCAGCTAAACCTTGAACACCAAGGGCAATAGGTCTGTTTCTCAT 38643 Query 65603 ATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 65662 ||||| | ||| | || || |||||||| | || ||||| ||||| | | | Sbjct 38644 GTTAGAACGTCTAGCAGTTTCAACTGGGTAATAATTTCTGTCGATAATCTTATTCA-AGT 38702 Query 65663 TCTGACA-ATTACTTTGACCACATCCTTCAGTTTGAGAAAAT-----CAAATCG----CT 65712 ||| | | | || ||| | | || | | || ||| | ||| | || Sbjct 38703 TCTTAGAGACAACCTTGGCGATCTCGTGTAACTTTTCAAAGTTGTACCAAGTGTTCTTCT 38762 Query 65713 CATCTATTACAAACATG--TTCAATG-CAACAGATGCCAGATTACAAACGGCTACCTCAT 65769 |||| | ||| | | | || | ||| || |||| ||||| || || || | Sbjct 38763 CATCAGATTCAACAAAGGCTGGAAGGGCAATGGAAGCCAAGTTACACACAGCGGTTTCTT 38822 Query 65770 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 65829 |||| | |||| | || ||| || | || |||| || | || || | Sbjct 38823 GTTCATCGGAGTATTCAACAATTTCACAACACAAGTTGGAGGACTTAATCATACCCAAGT 38882 Query 65830 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTT 65889 | | ||| || || |||||||| |||||||| || | |||||||| |||||||| | Sbjct 38883 TCTTTTGGTTGGATTTCTTGTTACAGGCATCCTTGTATAACATGAATGGGGTACCAGTCT 38942 Query 65890 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATC 65949 || | |||| ||||| || | | ||| | | ||||||| || | ||| | | Sbjct 38943 CAGTTTGAGCTTCTAAGATGGAGTACCATAACTTTTGAGCCTTGATAGTGGATCTA---C 38999 Query 65950 TCTT---TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGT 66006 ||| ||||||||||||| | ||||||| |||||| || || || | |||| Sbjct 39000 CCTTACCTTCTCTTTCGTATCTTTCATACAATTCTTCGAATTCATCACCGTAGACATCAC 39059 Query 66007 CCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 66066 | || || ||| |||| || | | ||| | ||| || || | | | |||| | Sbjct 39060 CTAAACCTGGAGCTTCAGATGGGGAGAACAAAGTCCATTCACCATTAGATTCAACTCTCT 39119 Query 66067 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGT 66126 |||| || | ||| || ||||| | ||| || |||||||| | ||| ||| || | Sbjct 39120 TCATGAATAAATCTGGGATCCATAAGGCTGGGAACAAATCTCTAGCTCTGATTTCTTCCT 39179 Query 66127 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGT 66186 | || |||||| ||| || | || | | |||||| ||||| ||||| | || Sbjct 39180 TACCGTGGTTCTTTCTAATGTCAATAAAATCAAAGATATCAGCGTGCCATGGTTCAATGT 39239 Query 66187 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 66246 | | ||| | | | || || | ||||| || || ||||| | |||||| |||||||| | Sbjct 39240 ACAAGGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAACGTATCTGGCGGTGTTGT 39299 Query 66247 TATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGC 66306 | | ||||||| ||||||||| ||||| || || ||||| || || || | ||| || Sbjct 39300 TGAACACTCTCACCATTGGAATGATACCGTTAGAGGTACCGTTAGTACCAGCGATGTAAG 39359 Query 66307 TTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 66366 || | || | ||||| || || || || || || || | ||||| || | Sbjct 39360 AACCGGTAGCTCTGATATTGTGGATGTGTAACCCAATACCACCAGCGGTCTTAGAAATCA 39419 Query 66367 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 66426 || ||| || || ||||| || || || || || |||||| ||||| || || Sbjct 39420 GAGCACATTCCTTCAAAGTATCGTAAATCCCTTCAATGGAGTCATCCTTCATGGCAACTA 39479 Query 66427 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 66486 ||||| ||||||||| | || ||| || |||||||| || || ||||| |||| Sbjct 39480 AGAAACAAGAAGACATTTGTGGGTGAGGAGTACCAGCATTAAACAAAGTTGGAGACGCGT 39539 Query 66487 GCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC--TGAGTCTATATCCCA 66544 | || || || | ||||| | | ||| || || ||||| | | | ||| | || Sbjct 39540 GAGTGAAGTATCTCTCAGACATCAAATTATAGGTTTCAATCACCTTTGGGATAT-TATCA 39598 Query 66545 TTGATGAATTCCTACTGCGACACGCAT--TAACATGTGCTGAGGTCTTTCAACGATCTTG 66602 | || || || | ||||| | ||| | | |||| |||||||| || | | ||| Sbjct 39599 CCG-TGGATACCAATGGCGACTCTCATGGTTAAATGT--TGAGGTCTCTCGGCAACCTTA 39655 Query 66603 TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TG 66660 || ||| | || ||||| ||| ||||||| || ||||| || ||||| || || || Sbjct 39656 CCGTCGATTCTTAATAAGTAAGATCTTTCCAAGGTCTTAAACCCGAAATAATTATAACTG 39715 Query 66661 AAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACAT 66720 ||| || || || |||| ||| | ||||| | || || | | || | || | || Sbjct 39716 AAA--TCACGGTCATAAACGATAGCAGAGTTTAATTCTTCACTGTGCTTTTGGACAATAT 39773 Query 66721 CCATGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTG 66779 | || || ||| || | || || || |||||||||| || || ||||| || || Sbjct 39774 CGTAAGT-ATCCTTGGACACCATAGGGGATGGTTTCCCATTCTTTGGGTTGACGTAAGTG 39832 Query 66780 AATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACG 66839 | | | || || |||| | || | ||| | |||| ||||| | || || | | Sbjct 39833 TAAAGTTGTTCAATAACTTGAGAGAACTGCTTTGTCGTTTGCTTGTGCAAGTTAGAGATG 39892 Query 66840 GCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATT 66899 || |||||||| |||| || ||||||||| ||||| ||||| | || || || Sbjct 39893 GCGATTCTAGCAGCTAAAACGGCATAATCTGGATGAACAGTAGTCATATAAGCAGCAGTT 39952 Query 66900 TCGGCTGCCAGAGTGTCCAATTC 66922 || || |||| | |||||||| Sbjct 39953 TCAGCAGCCAAGTTATCCAATTC 39975 Score = 104 bits (114), Expect = 3e-17 Identities = 230/343 (67%), Gaps = 4/343 (1%) Strand=Plus/Minus Query 65985 AACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCAC 66044 ||||| || || |||||| | ||||||||| | ||| | | | ||| |||| Sbjct 153286 AACTCCTCACCATAAACATCAGTGAGTCCAGGACACTTATCTTGGGAAAACAAACACCAA 153227 Query 66045 TCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAA 66104 ||| | | || ||| || |||||| | |||||||||||| | || ||| ||| Sbjct 153226 TCTTCACCCCGCTGAACTTTTTCCATAAACAAATCAGGAATCCATAATGCATAAAACAAA 153167 Query 66105 TCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATA 66164 ||||| | |||| |||||| || || ||||| | || || | ||| | | |||| Sbjct 153166 TCTCTAGCTCTAACTTCCTCCTTACCATGGTTCTTCCTCAGGTCTAAGAATTCAAAAATA 153107 Query 66165 TCATAATGCCACGGTTCCAAGTATATGGCCATAA--CTCCAGGCCGTTTGTTTCCTCCCT 66222 ||| |||||| ||||| || ||||| || || | || || | || || || |||| Sbjct 153106 TCACCATGCCAGGGTTCTAAATATATA--CAAAAGGCACCCGGTCTCTTATTACCACCCT 153049 Query 66223 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATG 66282 |||| | || | || || ||| ||||| ||||||| || | | ||| | || | Sbjct 153048 GATCGACATACTTGGCAGTACTATCGAAAACTTTCAACATGGGCACCAGTCCACTTGAAG 152989 Query 66283 TACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATT 66325 |||||||||| || | |||||| ||| | | ||| ||||| Sbjct 152988 TACCATTGGTACCTGCGATATATGATCCTGTAGAACGGATATT 152946 >seq3 Length=1585198 Score = 215 bits (238), Expect = 7e-51 Identities = 607/917 (66%), Gaps = 25/917 (3%) Strand=Plus/Minus Query 35851 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACC 35910 || |||||| || |||||||| || || | |||||||| || ||||| ||||| Sbjct 913963 AGCCATAACACCAGCCTTTTGGTAATCGGAAACTCTCTTTTCGAAGAAGTTAGTCTTACC 913904 Query 35911 TTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAA 35970 | || || || || |||||||| |||||||| ||| ||||||| ||||| || ||| | Sbjct 913903 AGCCAAGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTAACATTGTAAATCTTCTTACA 913844 Query 35971 TCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACA 36030 || | || | |||||||| ||||| ||||| | ||| ||| | ||||| Sbjct 913843 ACCGAGGGCAACTAATAATCTATCAGCGACGAATTCAACGTATTGACACATTAAATCACA 913784 Query 36031 ATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGA 36089 ||||| |||| | || ||||| | || | || ||| | |||| |||||| | Sbjct 913783 GTTCATACCTAATAACTTGACTGGCAAGGCATCGGTGAAGTATCTCTT-TTCAATGTCAA 913725 Query 36090 CCGCGTCTGTTATAAT---AGATATTACTGTTTCTTCACTCG-GTGG-ATACAATAAATG 36144 | || || || || || || | | |||| || | | ||| || ||| || Sbjct 913724 CAGCTTCGGTGATGATCTTAGCAACAATGCTTTCATC--TGGAGTGTTATTCAAG---TG 913670 Query 36145 TTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTT 36204 |||| | ||| || || || ||||| ||| || ||||||| || |||||||| Sbjct 913669 AGAGAACAATAGACAAGCAAAGTCAGTGTGTAAACCTTCATCTCTACAGATGAATTCGTT 913610 Query 36205 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 36264 || || || | || ||||||| || | ||| || | ||| || ||||| ||||| || Sbjct 913609 AGAGAAAGTTAAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATGGAAGCAAAGGA 913550 Query 36265 TCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCG 36322 ||||| ||||| || || || || || || ||||||| | ||| || || |||| | Sbjct 913549 ACCAGAGAAGAAGATACCCTCAACGGCAGCGAAGGCAACCAATCTTTCACCGAATAA--G 913492 Query 36323 GCACTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT- 36378 || |||| ||||| || ||||| || ||||| | | | | ||| || || Sbjct 913491 GCTTCATCATCGGAGATCCATCTTAAGGCCCATTCAGCCTTTTCTCTAATACATGGGATG 913432 Query 36379 TGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAAT 36438 ||| || || || || || | || | ||| || ||| ||||| || || || || Sbjct 913431 TGT-TCAATGGCGTTGAATAAGTAATCAGCTTCCTTTGGATCCTTAACGTAAGTGTCGAT 913373 Query 36439 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACA 36498 ||| | || | || || || |||||||| || ||||| || ||||||||||| Sbjct 913372 CAATAAGGAGTAAGTCTCAGAGTGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACA 913313 Query 36499 TCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTAT 36558 | | || || | || || ||||| | | | || ||| | ||||||||||| || || Sbjct 913312 TTTGGCTTCTGGGATTTGCACTTCAGCAGAGAAGTTTTCAACCAAATTTTCATTGACAAT 913253 Query 36559 TCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGT 36618 || ||| || || || || || || || || || ||| ||||||| | Sbjct 913252 ACCATCAGATGCAGCGAAGAAGGCTAACACTCTAGAGATGAAGTATCTTTCGTTGTCATT 913193 Query 36619 TAGT---TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAA 36675 | | || ||||| || | | || || |||| ||| | |||||| | ||||| || Sbjct 913192 CAATCTGTTGTTCCAGTCGTGTAAGTCCTTGGATAAATCAATTTCTTCGGCAGTCCAGAA 913133 Query 36676 TGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAAC 36735 || || || ||||| || ||||| | |||||| || ||||||| ||||| || | || Sbjct 913132 GGAAGCTTCGGCCTTCTTGTACATTTGCCAGATCTCGTGATATTTGATTGGGAATAAGAC 913073 Query 36736 AAATCTATT-TTGATTT 36751 ||||| || ||| ||| Sbjct 913072 GAATCTCTTCTTGTTTT 913056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172610775320