Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 188 1e-42 seq5 91.5 2e-13 >seq3 Length=1585198 Score = 188 bits (208), Expect = 1e-42 Identities = 405/594 (68%), Gaps = 15/594 (3%) Strand=Plus/Plus Query 124999 TTCCCA-TCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057 |||||| ||| ||||| || || ||| |||||||||| ||||| | || ||||| ||| Sbjct 913079 TTCCCAATCAAATATCACGAGATCTGGCAAATGTACAAGAAGGCCGAAGCTTCCTTCTGG 913138 Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117 || | |||||| | ||| | ||||||||| | |||| ||| | | | |||| ||| Sbjct 913139 ACTGCCGAAGAAATTGATTTATCCAAGGACTTACACGACTGGAACAACAGATTGAATGAC 913198 Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177 | || || | || || || | || |||||||| || | || ||||| || ||| Sbjct 913199 AACGAAAGATACTTCATCTCTAGAGTGTTAGCCTTCTTCGCTGCATCTGATGGTATTGTC 913258 Query 125178 AACGACAATCTG-TTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTT 125236 || || ||| || |||| | |||||| || || || ||||| | || || Sbjct 913259 AATGAAAATTTGGTTGAAAAC-TTCTCTGCTGAAGTGCAAATCCCAGAAGCCAAATGTTT 913317 Query 125237 TTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296 ||||| |||||||||||||| || ||| | ||||| || | ||||| | |||| || Sbjct 913318 CTACGGTTTCCAAATCATGATGGAAAACATACACTCTGAGACTTACTCCTTATTGATCGA 913377 Query 125297 CATGTACATTCGCGATCCGCAACGTAAACACAT--GCTCTTTAACGCAATCG-ACACGGT 125353 || ||| || |||| ||| | || | || | || ||||| || | |||| | Sbjct 913378 CACTTACGTTAAGGATC--CAAAGGAAGCTGATTACTTATTCAACGCCATTGAACAC-AT 913434 Query 125354 GCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGAT---CGATGACGACAAGTC 125410 || | ||| | |||||||| |||||| | | ||||| |||||| | ||| | Sbjct 913435 CCCATGTATTAGAGAAAAGGCTGAATGGGCCTTAAGATGGATCTCCGATGATG--AAGCC 913492 Query 125411 TTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAG 125470 || | || || ||| |||| || ||||| ||||| ||||| |||||||| || ||| Sbjct 913493 TT-ATTCGGTGAAAGATTGGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGTTC 913551 Query 125471 TTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAA 125530 ||||| ||||||| ||| | |||||| | || | ||||| || | || | ||| Sbjct 913552 CTTTGCTTCCATCTTCTGGTTGAAGAAGAGAGGTTTAATGCCAGGTTTAACTTTCTCTAA 913611 Query 125531 CGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT 125584 ||| || || | | |||| || || ||||| ||||||||| |||| |||| Sbjct 913612 CGAATTCATCTGTAGAGATGAAGGTTTACACACTGACTTTGCTTGTCTATTGTT 913665 >seq5 Length=915096 Score = 91.5 bits (100), Expect = 2e-13 Identities = 189/276 (68%), Gaps = 8/276 (3%) Strand=Plus/Minus Query 97989 AATGGGTCCATTCAAAACATTACCATCATCCCGGAAGAGTTGCGCAGAATCTACAAGACT 98048 ||||| |||||||||||| | | | | | || || || || | | || ||||| Sbjct 38142 AATGGTTCCATTCAAAACTTGCCAAACGTTCCTGATGAATTAAAACAATTGTATAAGACC 38083 Query 98049 GTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGAGGTGTCTACATT 98108 || ||||| ||| | ||| | | || |||||| |||| |||||||||| ||| || Sbjct 38082 GTTTGGGAAATTTCTCAAAAGTCTATCATTGATATGTCTGCTGACAGAGGTGCTTACGTT 38023 Query 98109 GACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGC-CCACCTACAGTCGTA---TGAC 98164 || || |||||| | || | || ||| |||| ||| ||| | ||| |||| Sbjct 38022 GATCAATCTCAATCTATGAACATCCAC-TTG-AGAGCTCCAACTATGG--GTAAGTTGAC 37967 Query 98165 TTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTGAGAAC 98224 ||| || ||||| |||| ||||| ||||| | ||||| || |||||||| ||||||| Sbjct 37966 TTCCATGCACTTCTACGGTTGGAAGAAGGGTTTAAAGACCGGTATGTACTACTTGAGAAC 37907 Query 98225 AAAGTCGGCCACCAATGCCATACCATTTACGGTGGA 98260 | | ||| || |||||| | ||| || || || Sbjct 37906 TCAAGCCGCCGCCGCTGCCATTCAATTCACAGTTGA 37871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058986945480