Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq3 140 2e-28 seq14 125 5e-24 seq5 98.7 7e-16 >seq3 Length=1585198 Score = 140 bits (154), Expect = 2e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||||||||||||| || || || | ||||| || ||||| |||||||||||| Sbjct 1231560 CCACCTCTCAATCTTAAGACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAATCGGAC 1231501 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| ||||||||||||| || || ||| | ||||| | |||||| || ||| Sbjct 1231500 AAGGTTCTACCGTCTTCTAATTGCTTACCGGCGAAGATCAATCTTTGTTGATCAGGTGGG 1231441 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| || ||| ||| ||| | || || || || ||| || Sbjct 1231440 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAGGATTCGACC 1231381 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 ||||| || ||||| |||||||| | || || |||||||||||||| || Sbjct 1231380 TCTAAAGTGATGGTCTTACCTGTTAAGGTCTTAACAAAAATTTGCATGTT 1231331 >seq14 Length=138463 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||||||||| || || | ||| || || ||||| ||||||||||| | Sbjct 120784 CCACCTCTCAATCTTAAAACCAAGTGCAAGGTTGATTCCTTTTGAATGTTGTAATCAGAT 120843 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | |||| | ||||||||||| || ||||| | || || | |||||| || ||| Sbjct 120844 AAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGG 120903 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| || || ||| || ||| ||| | || || || || ||| || Sbjct 120904 ATACCTTCCTTATCTTGAATCTTAGACTTGACATTGTCAATAGTGTCAGAGGATTCAACC 120963 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||||| || ||||| ||||| || | || || || ||||||||||| Sbjct 120964 TCTAAAGTGATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCAT 121010 >seq5 Length=915096 Score = 98.7 bits (108), Expect = 7e-16 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| ||||| || || || || | |||||| || ||||| |||||||| ||| Sbjct 587566 CCACCTCTTAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAA 587625 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| |||| | ||||||||||| || ||||| | || || | |||||| || ||| Sbjct 587626 AGAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGGG 587685 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATC 15303 || ||||| ||||| ||||| || ||| | || |||||||| Sbjct 587686 ATACCTTCCTTGTCTTGGATTTTAGATTTGACATTGTCAATGGTATC 587732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362179098476643