Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq14 91.5 1e-13 seq3 91.5 1e-13 >seq14 Length=138463 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| |||||||||||||| ||||| || | || || |||||||| || ||||| Sbjct 120783 ACCACCTCTCAATCTTAAAACCAAGTGCAAGGTTGATTCCTTTTGAATGTTGTAATCAGA 120842 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 ||| | |||| || ||||| || || ||||| || || | ||| || || | || Sbjct 120843 TAAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGG 120902 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||| |||||| ||| || ||||| | ||| ||| || | | || || Sbjct 120903 GATACCTTCCTTATCTTGAATCTTAGACTTGACATTGTCAATAGTGTCAGAGGATTCAAC 120962 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || || ||||| ||||| ||||| || || |||||||| Sbjct 120963 CTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCAT 121010 >seq3 Length=1585198 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| |||||||||||||| ||||| |||| ||| || ||||| || || |||||| Sbjct 1231561 ACCACCTCTCAATCTTAAGACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAATCGGA 1231502 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | | || || ||||| || || || || ||||| | ||| || || | || Sbjct 1231501 CAAGGTTCTACCGTCTTCTAATTGCTTACCGGCGAAGATCAATCTTTGTTGATCAGGTGG 1231442 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||| || ||| || || ||||| | ||| ||| || | | || || Sbjct 1231441 GATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAGGATTCGAC 1231382 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATGT 44123 || | || || || ||||| ||||| ||||| ||||| |||||||||| Sbjct 1231381 CTCTAAAGTGATGGTCTTACCTGTTAAGGTCTTAACAAAAATTTGCATGT 1231332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354777500551404