Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016-
03-01] 23 sequences; 12,320,962 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq3 215 4e-51
>seq3
Length=1585198
Score = 215 bits (238), Expect = 4e-51
Identities = 573/866 (66%), Gaps = 21/866 (2%)
Strand=Plus/Minus
Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919
||||| || ||| |||||| ||||| || ||||| || || || | || || || ||
Sbjct 913947 TTTTGGTAATCGGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCAGCCAAGGAGATGTTC 913888
Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAATAGTAT---TTTTTACACCCTAATTCTAGT 12976
||||| || ||||| || || | |||| | ||| || ||||| || | | | |
Sbjct 913887 TCCATGAAGTCGAATGGGTTGGT--AACATT-GTAAATCTTCTTACAACCGAGGGCAACT 913831
Query 12977 AACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATT 13036
|| ||||| ||||| || || || | ||| || |||||||||||||||||| |||| |
Sbjct 913830 AATAATCTATCAGCGACGAATTCAACGTATTGACACATTAAATCACAGTTCATACCTAAT 913771
Query 13037 AATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACT 13096
|| || || |||| || || || || | | ||||| || ||||| |||||| | |
Sbjct 913770 AACTTGACTGGCAAGGCATCGGTGAAGTATCTCTTTTCAATGTCAACAGCTTCGGTGATG 913711
Query 13097 ATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGCTTAAACATCATACATGCA 13156
|| | | | | | || ||||| || | || |||| | ||| |||
Sbjct 913710 ATCTTAGCAACAATGCTTTCATCTGGAGTGTTATTCAAGTGAGAGAACAATAGACAAGCA 913651
Query 13157 AAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGC 13216
|| ||| ||| || ||||||||||||| || | ||||| || || |||| ||| |||
Sbjct 913650 AAGTCAGTGTGTAAACCTTCATCTCTACAGATGAATTCGTTAGAGAAAGTTAAACCTGGC 913591
Query 13217 ATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCT 13276
|| | |||| || || | ||| || || | |||||| ||||| || || || || ||
Sbjct 913590 ATTAAACCTCTCTTCTTCAACCAGAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCC 913531
Query 13277 TCAACTGCTGCAAACGCTATCAACCTTTCACC--ATACGTACTATTTTTACTCTCTATCC 13334
||||| || || || || | ||| |||||||| ||| | || | | | ||||
Sbjct 913530 TCAACGGCAGCGAAGGCAACCAATCTTTCACCGAATAAG-GCT-TCATCATCGGAGATCC 913473
Query 13335 ACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATA 13394
| || |||||| | || |||| | ||| || || | ||| || ||||| ||||
Sbjct 913472 ATCTTAAGGCCCATTCAGCCTTTTCTCTAATACATGGGATGTGTTCAATGGCGTTGAATA 913413
Query 13395 AATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTG 13454
| |||| |||||| || || ||||| || ||||||||| || | || |
Sbjct 913412 AGTAATCAGCTTCCTTTGGATCCTTAACGTAAGTGTCGATCAATAAGGAGTAAGTCTCAG 913353
Query 13455 AATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAA 13514
| || || ||||||||| ||||||||||| || |||||| | || |||| | || |
Sbjct 913352 AGTGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCTGGGATTTGCA 913293
Query 13515 CTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaa 13574
|||| | | || |||| | || ||||| || || || || ||| ||||| || |
Sbjct 913292 CTTCAGCAGAGAAGTTTTCAACCAAATTTTCATTGACAATACCATCAGATGCAGCGAAGA 913233
Query 13575 aaGCAAGTATGTGCT-TA---ATAAAttttttttCGTTTTCTGACAA---CTTTAACCAA 13627
| || | | || || || || | | ||||||| || ||| || |||
Sbjct 913232 AGGCTAACA----CTCTAGAGATGAAGTATCTTTCGTTGTCATTCAATCTGTTGTTCCAG 913177
Query 13628 TCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTC 13687
|| | || || || |||||||| | || || | ||||| || ||||| | ||||||
Sbjct 913176 TCGTGTAAGTCCTTGGATAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTCGGCCTTC 913117
Query 13688 TTATACATCATCCATATATCCTTATA 13713
|| ||||| ||| || || | |||
Sbjct 913116 TTGTACATTTGCCAGATCTCGTGATA 913091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430982279190246
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |