Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016-
03-01] 23 sequences; 12,320,962 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq3 214 4e-50
seq14 145 2e-29
seq5 113 1e-19
>seq3
Length=1585198
Score = 214 bits (236), Expect = 4e-50
Identities = 418/607 (69%), Gaps = 22/607 (4%)
Strand=Plus/Plus
Query 268700 AGATTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTT 268759
||||| || |||| ||||| | || || || ||| |||||||| ||||||
Sbjct 913067 AGATTCGTCTTATTCCCAATCAAATATCACGAGATCTGGCAAATGTACAAGAAGGCCGAA 913126
Query 268760 GCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAA- 268818
||||| || ||||||| |||||| | ||| | || | |||||| || ||||| ||
Sbjct 913127 GCTTCCTTCTGGACTGCCGAAGAAATTGATTTATCCAAGGACTTACACGACTGGAACAAC 913186
Query 268819 ---TTTAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTT-GCGTTTTTTGCAGTTA 268874
|| || || | |||||| || || ||| | | | || || || || || |
Sbjct 913187 AGATTGAATGACA-ACGAAAGATACTTCATCTCT-AGAGTGTTAGCCTTCTTCGCTGCAT 913244
Query 268875 GTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTG 268934
||||||||| || || |||||| | || || || |||| | || || || || || |
Sbjct 913245 CTGATGGTATTGTCAATGAAAATTTGGTTGAAAACTTCTCTGCTGAAGTGCAAATCCCAG 913304
Query 268935 AAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACA 268994
|||||| |||||| ||||| ||||| || || ||||| || || || |||| |||
Sbjct 913305 AAGCCAAATGTTTCTACGGTTTCCAAATCATGATGGAAAACATACACTCTGAGACTTACT 913364
Query 268995 GTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAA-GACTATTTTCTTCT 269053
|||| || || ||||| | | ||| | ||| ||| || || || |||
Sbjct 913365 CCTTATTGATCGACACTTACGTTAAGGAT-----CCAAAGGAAGCTGATTACTTA-TTCA 913418
Query 269054 ATGA----GAACT-ATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAA 269108
| | |||| || ||| | ||| |||| |||||||||| | | ||||||
Sbjct 913419 ACGCCATTGAACACATCCCATGTATTAGAGAAAAGGCTGAATGGGCCTTAAGATGGATCT 913478
Query 269109 ACGATAGCGC-GCCTTA--CGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATAT 269165
|||| | |||||| ||| ||||| || ||||| || || || || || ||||| |
Sbjct 913479 CCGATGATGAAGCCTTATTCGGTGAAAGATTGGTTGCCTTCGCTGCCGTTGAGGGTATCT 913538
Query 269166 TCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGAT 269225
|||| || || || ||||| | ||||| ||||||||||| ||||| | |||||||| |
Sbjct 913539 TCTTCTCTGGTTCCTTTGCTTCCATCTTCTGGTTGAAGAAGAGAGGTTTAATGCCAGGTT 913598
Query 269226 TAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTT 269285
||||||||||||||||||| || | || || |||||||||||| ||||| ||||||
Sbjct 913599 TAACTTTCTCTAACGAATTCATCTGTAGAGATGAAGGTTTACACACTGACTTTGCTTGTC 913658
Query 269286 TATTATT 269292
|||| ||
Sbjct 913659 TATTGTT 913665
Score = 118 bits (130), Expect = 2e-21
Identities = 151/208 (73%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
||||| || ||||| || || || || || || || | |||||||||||||||| |||
Sbjct 1231536 TGTAAAGTGGATTCCTTTTGGATGTTGTAATCGGACAAGGTTCTACCGTCTTCTAATTGC 1231477
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| || || || || | || ||||||||||| || || ||||| || || || |||||
Sbjct 1231476 TTACCGGCGAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGGATCTTG 1231417
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| || ||||| || | || || | ||| ||||||| || || |||||||| ||
Sbjct 1231416 GACTTGACATTGTCAATAGTGTCAGAGGATTCGACCTCTAAAGTGATGGTCTTACCTGTT 1231357
Query 104537 AGTGTTTTTACAAATATCTGCATTTTGT 104564
| || || ||||| || ||||| ||||
Sbjct 1231356 AAGGTCTTAACAAAAATTTGCATGTTGT 1231329
>seq14
Length=138463
Score = 145 bits (160), Expect = 2e-29
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| || || ||||| || ||||| || || ||||||| ||||||||| ||||||| |||
Sbjct 120808 TGCAAGGTTGATTCCTTTTGAATGTTGTAATCAGATAAAGTTCTACCATCTTCTAATTGC 120867
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| |||||||| |||| || ||||||||||| || || ||||| ||||| ||||||||
Sbjct 120868 TTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGGATACCTTCCTTATCTTGAATCTTA 120927
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| || ||||| || | || || | ||| ||||||| || || |||||||||||
Sbjct 120928 GACTTGACATTGTCAATAGTGTCAGAGGATTCAACCTCTAAAGTGATGGTCTTACCAGTT 120987
Query 104537 AGTGTTTTTACAAATATCTGCAT 104559
| || || || || || |||||
Sbjct 120988 AAGGTCTTAACGAAAATTTGCAT 121010
>seq5
Length=915096
Score = 113 bits (124), Expect = 1e-19
Identities = 125/167 (75%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||||| || | || | || || || ||||| || || || || ||||| ||
Sbjct 587566 CCACCTCTTAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAA 587625
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
||||||||||| ||||||| ||| || |||||||| |||| || |||||||| || ||
Sbjct 587626 AGAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGGG 587685
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC 104499
|| ||||| || || || || || | ||| ||||| || | ||||||
Sbjct 587686 ATACCTTCCTTGTCTTGGATTTTAGATTTGACATTGTCAATGGTATC 587732
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151398060697284
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |