Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq12 242 4e-59 seq4 158 1e-33 >seq12 Length=324105 Score = 242 bits (268), Expect = 4e-59 Identities = 501/731 (69%), Gaps = 46/731 (6%) Strand=Plus/Minus Query 6705 AGGATTATAATCTAACAATT-CAAAATCTTCAAATTTAAAATCACATAAATTATCAG--A 6761 |||||| ||||| ||||||| | ||||| |||||||| |||||| | |||||| | Sbjct 267274 AGGATTGTAATC-AACAATTTCGAAATCATCAAATTTGAAATCATCGA---TATCAGTAA 267219 Query 6762 CtttttttttAATATTACAAC--AGGTGAAGGTTTTATTGA-TCGAGTTAATTGTTCTTT 6818 || || | ||||| || ||| ||| ||| | | || | || | | | ||||||||| Sbjct 267218 CTGTTCTCTTAATCTT-CAATTTAGG-GAATGCTCTAGGCACTCTACTCATTTGTTCTTT 267161 Query 6819 TATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATTCACC 6878 | || | | ||||| | || | ||||| ||| || | || ||||| |||||||| Sbjct 267160 CAATGCATCAACGTGATCACAGTACACATGAGAATCACCCATAGTGTGAATGAATTCACC 267101 Query 6879 TGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATT 6938 ||||| |||||| ||| |||||||| | || || ||||||| |||||| || | ||| Sbjct 267100 TGGTTCCATATCCACAATGTGAGCAATCATGTAAGTCAATAATGAATAAGATGCAATATT 267041 Query 6939 AAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAGATAAAATATT 6998 ||||| ||||||||||||||||| ||||||||||| |||||| ||| ||| || Sbjct 267040 GAAAGGCACACCTAATCCCATATCACAAGATCTTTGATACATTTGACATGAT--AATCTT 266983 Query 6999 G-----------TCTATAG---------CATAAAATTGACACAATACATGACATGGAGGT 7038 | ||| | | |||| |||||||| || ||||||||||| ||| Sbjct 266982 GGTTTACCTCCATCTTTTGGGAAGTTCACATAGAATTGACAAAACACATGACATGGTGGT 266923 Query 7039 AAAACAGCCTGATC--TATAT-CAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCA 7095 || ||| || | || ||| ||||||||| |||| | | ||| | |||||| Sbjct 266922 AA---TGCCATTTCCTTGAATGCAGGTGGATTCCATGCAGATAAAATAATTCTTCTATCG 266866 Query 7096 TTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATA-CCCTGACCTTC 7154 | |||||| |||| || | |||||| | ||||||||| ||| |||| ||| Sbjct 266865 TATGGATTATTTTTCAAAGTATCAATAATTTTAGCTAATTGATC-ATACCCCTTACCAGA 266807 Query 7155 ATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAAT 7214 |||| || || ||||| | |||| | || ||||| ||||||||||| || ||||||| Sbjct 266806 GTAATCAGCATCACAATCTGTATACTCTGCACCAAAGTGTCTCCATTGGAATCCATAAAC 266747 Query 7215 AGGACCTAAATCACCTTCTTCACGATGATTAAATCCTAATCGATTTAAATTAGATTTTGA 7274 ||||||||||| |||||| | | | | |||||||| | ||||| | | || Sbjct 266746 TGGACCTAAATCGCCTTCTCTTCTTTCAGTTAATCCTAAAGAGTCTAAATATTCTCTAGA 266687 Query 7275 TCCATAAGCATCCCAAATATGTACAGAtttttttGATA--AATTTAAAGAATTTGTAGAT 7332 ||| | | |||||||||| | ||| || ||||| ||||| || ||| ||| Sbjct 266686 TCCGTTACCATCCCAAATTTTCACACCTTGAGCTGATAATAATTT--CCCATCTGTTGAT 266629 Query 7333 CCTTTAAGGAACCATAAAAGTTCTTCTACTATTCCACGCCAAAACATTCTTTTTGTAGTG 7392 || || |||||| || | |||| || || | | || |||| || || || Sbjct 266628 CCAGAAACGAACCACAATAATTCTAATAAGATAGCCTTGAAGAAAGTTCTCTTGGTTGTT 266569 Query 7393 AATAAAGGGAA 7403 ||||||||||| Sbjct 266568 AATAAAGGGAA 266558 >seq4 Length=1369417 Score = 158 bits (174), Expect = 1e-33 Identities = 366/548 (67%), Gaps = 18/548 (3%) Strand=Plus/Minus Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457 || |||||||| ||||| | ||||| |||| ||||| | ||||||||| || Sbjct 874572 AAGTTTGAAGATATGGGTATCGGTGGGTTAGACAAGGAATTCACATCCATTTTCAGAAGA 874513 Query 164458 GCATTTGCTTCTAGATCAGTTCCTATC-GAAATAATaaaaaaaTTAGGCTGTAAACATAT 164516 || ||||| || | | |||| | | | | | || ||||||| || |||| | Sbjct 874512 GCCTTTGCATCACG-TATTTTCCCACCTGCATTGATTGAAAAATTGGGTATCCAACACGT 874454 Query 164517 AAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCAT 164576 ||||| || | ||| ||||||| |||||| ||||||||| || || ||| || || Sbjct 874453 TAAAGGTATGCTTTTATATGGACCACCTGGTACCGGTAAAACTTTGATTGCTAGACAAAT 874394 Query 164577 TGCTCAAGCTTTTAAATC--GCGACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAAC 164634 || | || || || | | || || ||| |||||||||||||| || | | | Sbjct 874393 TGGTAAAATGTTGAATGCTAGGGAACC--TAAGATTGTTAATGGTCCAGATATGCTTTCC 874336 Query 164635 AAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGAA 164694 |||||||| ||||| || |||| ||| || | || | || || || |||||||| ||| Sbjct 874335 AAATATGTCGGTGAATCTGAAGGTAACATTCGTAAACTTTTCCAAGATGCTGAAGATGAA 874276 Query 164695 CAAAAGAAAGCAGGTTTAGCTAGTAAATTACATGTTATTGTTTTTGATGAGATAGATGCT 164754 | || || |||| || | |||||| |||| |||||||||| | ||| || Sbjct 874275 TATAAAAAGAAAGGTGAAGAATCTTCCTTACATATTATCATTTTTGATGAATTGGATTCT 874216 Query 164755 CTTT----GCAAA--------AAACGTGGTGATAATATTATTCATGATGCAGTGGTTAAT 164802 | | ||||| ||| || || || | | |||| |||||||| Sbjct 874215 GTGTTCAAGCAAAGAGGTTCCAAATCTGATGGTACCGGTGTCGCTGATAACTTGGTTAAT 874156 Query 164803 CAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGGTATG 164862 || || | |||| || |||||||| ||| ||||| |||||||| || | |||||| Sbjct 874155 CAATTATTAGCTAAGATGGATGGTGTGGAACAATTAAACAATATTTTGGTTATCGGTATG 874096 Query 164863 ACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATTGAAA 164922 ||||| || ||||| || ||| ||| ||||| |||||||| |||| ||| || || Sbjct 874095 ACCAATAGAAAAGATTTGATCGATAGTGCCTTATTGAGACCTGGTAGATTTGAAGTGCAA 874036 Query 164923 ATAGAAAT 164930 | ||||| Sbjct 874035 GTTGAAAT 874028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871828686800