Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq5 95.1 2e-15 seq2 91.5 2e-14 >seq5 Length=915096 Score = 95.1 bits (104), Expect = 2e-15 Identities = 175/253 (69%), Gaps = 3/253 (1%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||| |||| |||||||||| ||||| || || ||||||||||| | | | ||| | Sbjct 453293 AGAT-TCTTAGAGATAACATTCAAGGTATTACAAAGCCAGCTATTAGAAGATTAGCTAGA 453351 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || || | | |||| || | |||||||| | | | ||| || || Sbjct 453352 AGAGGTGGTGTTAAAAGAATTTCTGCTTTAATTTATGAAGAAGTCAGAGCTGTCTTAAA- 453410 Query 16568 ATCTTCCTCA-AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAA 16626 ||| | || | | | |||||| |||||| || ||||| || ||||| || | || Sbjct 453411 ATCATTCTTAGAAAATGTTATCAGAGATGCTGTCACTTATACTGAACACGCAAAGAGAAA 453470 Query 16627 GACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGG 16686 ||||||||| || | ||| |||| |||||||| || | ||||| | | | ||||| Sbjct 453471 GACTGTCACTTCATTAGATGTCGTTTATGCATTAAAGAGACAAGGTAGAACTTTATATGG 453530 Query 16687 TTTTGGAAGTTAA 16699 ||| || ||||| Sbjct 453531 TTTCGGTGGTTAA 453543 >seq2 Length=1634117 Score = 91.5 bits (100), Expect = 2e-14 Identities = 172/252 (68%), Gaps = 1/252 (0%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||| ||| |||||||||| ||||| ||||| |||||||||||| | | ||||| | Sbjct 88684 AGAT-TCTCAGAGATAACATTCAAGGTATCACAAAGCCAGCTATCAGAAGATTGGCTAGA 88742 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || ||| | | |||| || | || ||||| | | | ||| || ||| Sbjct 88743 AGAGGTGGTGTTAAGAGAATTTCTGCTTTAATTTACGAAGAAGTCAGAGCTGTCTTAAAG 88802 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 ||| | | | ||| ||| |||||| | || || || |||||||| | ||| Sbjct 88803 TCATTCTTAGAAAACGTCATCAGAGATGCTGTTACTTACACTGAACACGCTAAGAGAAAG 88862 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 || ||||| || ||||| | || || || ||||| | ||||| | | | |||||| Sbjct 88863 ACCGTCACTTCTTTGGATGTTGTTTACGCCTTGAAGAGACAAGGTAGAACCTTATATGGT 88922 Query 16688 TTTGGAAGTTAA 16699 || || ||||| Sbjct 88923 TTCGGTGGTTAA 88934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075178970939