Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq5 345 5e-90 seq3 244 1e-59 >seq5 Length=915096 Score = 345 bits (382), Expect = 5e-90 Identities = 1360/2120 (64%), Gaps = 39/2120 (2%) Strand=Plus/Plus Query 61986 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 62045 || || | |||||||||||||| ||||| |||| || || | | |||||||| || Sbjct 37868 TTATCAACTGTGAATTGAATGGCAGCGGCGGCGGCTTGAGTTCTCAAGTAGTACATACCG 37927 Query 62046 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 62105 || |||| ||| |||| ||||| || ||||| || | || | | ||| Sbjct 37928 GTCTTTAAACCCTTCTTCCAACCGTAGAAGTGCATGGAAGTCAACTTACCCATAGTTGGA 37987 Query 62106 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62165 || | ||||| |||||||||||| |||||| | | | || || ||||| |||| | Sbjct 37988 GCTCTCAAGTGGATGTTCATAGATTGAGATTGATCAACGTAAGCACCTCTGTCAGCAGAC 38047 Query 62166 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 62225 || | ||||| | |||||| | ||||||||||| || ||||| | | | || | || Sbjct 38048 ATATCAATGATAGACTTTTGAGAAATTTCCCAAACGGTCTTATACAATTGTTTTAATTCA 38107 Query 62226 TCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATC 62282 || |||| ||||| || |||||||| ||| ||| | ||||| ||||| || Sbjct 38108 TCAGGAACGTTTGGCAAGTTTTGAATGGAACCATTATCAGAAATAATGTGGTTCTTCATA 38167 Query 62283 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 62342 |||| ||||||| || ||| |||| | | | || ||||| | ||| Sbjct 38168 GAGTCATCCCATAATCCAAGGTCAACCAAATCTCTCAACAAGTATGGGTTAACAATTTGG 38227 Query 62343 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCA 62402 ||||| |||| | ||||| | || ||||||||| || || ||||| | | ||| Sbjct 38228 AATTCACCAGCTAGCACTCTTCTAGAGTAAATATTGGAAGTGTATGGTTCGAAACATTCA 38287 Query 62403 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 62462 || | ||||| ||||| | ||| || ||||| ||||| || || | ||||| ||| Sbjct 38288 TTGTAACCCAAGATTTGGGAAGTAGAAGCAGTTGGCATTGGAGCAAGTAATAAGGAGTTT 38347 Query 62463 CTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGT-TCCCAATTCCAAAGATCCGACGG 62521 || | ||| | || ||||| | || || | || | ||||| | ||| | ||| | || Sbjct 38348 CTTAAACCATTGGTCATGATTCTTTCCTTCA-AGTTATCCCAGTCCCATAAATCAGTTGG 38406 Query 62522 --TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 62579 | || ||| | ||||| | || || ||| || | Sbjct 38407 CTTCTTACCCCATAAATCGAA--TTGCAAGATACCTTGGGAAGCTGGAGAACCTTCAAAA 38464 Query 62580 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 62639 || || || ||||| | |||| ||| |||||||| ||||| | ||| Sbjct 38465 GTTTCATACTTACCTTCTTCGATGGCTAATTCGACGGAGGCCTCTAAAGCACCATGGTAA 38524 Query 62640 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT 62699 | |||||| ||||| | | |||| || ||||| | ||||||||| | | | Sbjct 38525 AGGGTTTCAAAGATTTGAATGTTTAACAATTTAGCTTCTGGAGAGTCAAATGGA-ATTCT 38583 Query 62700 AAGAGA-ATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 62758 || | || || || || ||||| ||||||||||||| | |||||||| | |||| | Sbjct 38584 CAGTAACATGAATGCATCAGCTAAACCTTGAACACCAAGGGCAATAGGTCTGTTTCTCAT 38643 Query 62759 ATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 62818 ||||| | ||| | || || |||||||| | || ||||| ||||| | | | Sbjct 38644 GTTAGAACGTCTAGCAGTTTCAACTGGGTAATAATTTCTGTCGATAATCTTATTCA-AGT 38702 Query 62819 TCTGACA-ATTACTTTGACCACATCCTTCAGTTTGAGAAAAT-----CAAATCGCC---- 62868 ||| | | | || ||| | | || | | || ||| | ||| | | Sbjct 38703 TCTTAGAGACAACCTTGGCGATCTCGTGTAACTTTTCAAAGTTGTACCAAGTGTTCTTCT 38762 Query 62869 CATCTATTACAAACATG--TTCAAGG-CAACAGATGCCAGATTACAAACGGCTACCTCAT 62925 |||| | ||| | | | |||| ||| || |||| ||||| || || || | Sbjct 38763 CATCAGATTCAACAAAGGCTGGAAGGGCAATGGAAGCCAAGTTACACACAGCGGTTTCTT 38822 Query 62926 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAAT 62985 |||| | |||| | || ||| || | || |||| || | || || | Sbjct 38823 GTTCATCGGAGTATTCAACAATTTCACAACACAAGTTGGAGGACTTAATCATACCCAAGT 38882 Query 62986 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTT 63045 | | ||| || || |||||||| |||||||| || | |||||||| |||||||| | Sbjct 38883 TCTTTTGGTTGGATTTCTTGTTACAGGCATCCTTGTATAACATGAATGGGGTACCAGTCT 38942 Query 63046 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATC 63105 || | |||| ||||| || | | ||| | | ||||||| || | ||| | Sbjct 38943 CAGTTTGAGCTTCTAAGATGGAGTACCATAACTTTTGAGCCTTGATAGTGGATCTACCCT 39002 Query 63106 TCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63165 | | ||||||||||||| | ||||||| |||||| || || || | |||| | | Sbjct 39003 TACCTTCTCTTTCGTATCTTTCATACAATTCTTCGAATTCATCACCGTAGACATCACCTA 39062 Query 63166 ATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 63225 | || ||| |||| || | | ||| | ||| || || | | | |||| |||| Sbjct 39063 AACCTGGAGCTTCAGATGGGGAGAACAAAGTCCATTCACCATTAGATTCAACTCTCTTCA 39122 Query 63226 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTC 63285 | || | ||| || ||||| | ||| || | |||||| | ||| ||| || || | Sbjct 39123 TGAATAAATCTGGGATCCATAAGGCTGGGAACAAATCTCTAGCTCTGATTTCTTCCTTAC 39182 Query 63286 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 63345 | |||||| ||| || | || | | ||||||| ||||| ||||| | ||| | Sbjct 39183 CGTGGTTCTTTCTAATGTCAATAAAATCAAAGATATCAGCGTGCCATGGTTCAATGTACA 39242 Query 63346 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 63405 ||| | | | || || | ||||| || || ||||| | |||||| |||||||| || Sbjct 39243 AGGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAACGTATCTGGCGGTGTTGTTGA 39302 Query 63406 AAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTC 63465 | ||||||| ||||||||| |||||||| || |||| || ||||| | ||| || | Sbjct 39303 ACACTCTCACCATTGGAATGATACCGTTAGAGGTACCGTTAGTACCAGCGATGTAAGAAC 39362 Query 63466 CACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63525 | | || | ||||| || || || || || || || | ||||| || | | Sbjct 39363 CGGTAGCTCTGATATTGTGGATGTGTAACCCAATACCACCAGCGGTCTTAGAAATCAGAG 39422 Query 63526 CGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAA 63585 | ||| || || || || || || || || ||| ||||| ||||| || || | Sbjct 39423 CACATTCCTTCAAAGTATCGTAAATCCCTTCAATGGAGTCATCCTTCATGGCAACTAAGA 39482 Query 63586 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 63645 |||| ||||||||| | || ||| || |||||||| || || ||||| ||||| | Sbjct 39483 AACAAGAAGACATTTGTGGGTGAGGAGTACCAGCATTAAACAAAGTTGGAGACGCGTGAG 39542 Query 63646 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC--TGAGTCTATATCCCATTG 63703 | || || | ||||| | | ||| || || ||||| | | | ||| | || | Sbjct 39543 TGAAGTATCTCTCAGACATCAAATTATAGGTTTCAATCACCTTTGGGATAT-TATCACCG 39601 Query 63704 ATGAATTCCTACTGCGACACGCAT--TAACATGTGCTGAGGTCTTTCAACGATCTTGTTG 63761 || || || | ||||| | ||| | | |||| |||||||| || | | ||| | Sbjct 39602 -TGGATACCAATGGCGACTCTCATGGTTAAATGT--TGAGGTCTCTCGGCAACCTTACCG 39658 Query 63762 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 63819 | ||| | || ||||| ||| ||||||| || ||||| || ||||| || || ||||| Sbjct 39659 TCGATTCTTAATAAGTAAGATCTTTCCAAGGTCTTAAACCCGAAATAATTATAACTGAAA 39718 Query 63820 AGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCA 63879 || || || |||| ||| | ||||| | || || | | || | || ||||| Sbjct 39719 --TCACGGTCATAAACGATAGCAGAGTTTAATTCTTCACTGTGCTTTTGGACAATATCGT 39776 Query 63880 TGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAAT 63938 || || ||| || | || || || |||||||||| || || || || || || | Sbjct 39777 AAGT-ATCCTTGGACACCATAGGGGATGGTTTCCCATTCTTTGGGTTGACGTAAGTGTAA 39835 Query 63939 AAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCT 63998 | | || || |||| | || | ||| | |||| |||||| | || || | ||| Sbjct 39836 AGTTGTTCAATAACTTGAGAGAACTGCTTTGTCGTTTGCTTGTGCAAGTTAGAGATGGCG 39895 Query 63999 ATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCG 64058 ||||| || |||| || ||||||||| ||||| ||||| | || || |||| Sbjct 39896 ATTCTAGCAGCTAAAACGGCATAATCTGGATGAACAGTAGTCATATAAGCAGCAGTTTCA 39955 Query 64059 GCTGCCAGAGTGTCCAATTC 64078 || |||| | |||||||| Sbjct 39956 GCAGCCAAGTTATCCAATTC 39975 Score = 107 bits (118), Expect = 2e-18 Identities = 337/518 (65%), Gaps = 8/518 (2%) Strand=Plus/Minus Query 62968 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63027 ||||||||||||| ||||| | ||||| || || || || | |||||| || || | Sbjct 153459 ACTTGATAGTTCCCAAATTCTTCTGATTGGATTTCTTATTGCATGAATCCTTGTATAGTA 153400 Query 63028 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63087 ||||| ||||||| ||| | || | | | || || | ||| | | |||| | Sbjct 153399 GAAATGGGTTACCAGTCTCAGTTTGGGCGACAAGTATAGCATGCCATAATTTTTGAGCTT 153340 Query 63088 TTA--TTATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 63145 | | || | ||| | || | | ||| | ||| ||| ||| | | ||||| Sbjct 153339 TAACCTTTTTGAT--GAATTTACCTTCACGTTCATATTTCTCATATAGAGCCACAAACTC 153282 Query 63146 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 63205 || || |||||| | ||||||||| | ||| | | | ||| |||| ||| | Sbjct 153281 CTCACCATAAACATCAGTGAGTCCAGGACACTTATCTTGGGAAAACAAACACCAATCTTC 153222 Query 63206 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 63265 | || ||| || |||||| | |||||||||||| | || ||| | |||||| Sbjct 153221 ACCCCGCTGAACTTTTTCCATAAACAAATCAGGAATCCATAATGCATAAAACAAATCTCT 153162 Query 63266 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 63325 | |||| |||||| || || ||||| | || || | ||| | | ||||||| Sbjct 153161 AGCTCTAACTTCCTCCTTACCATGGTTCTTCCTCAGGTCTAAGAATTCAAAAATATCACC 153102 Query 63326 ATGCCACGGTTCCAAGTATATGGCCATAA--CTCCAGGCCGTTTGTTTCCTCCCTGATCT 63383 |||||| ||||| || ||||| || || | || || | || || || |||||||| Sbjct 153101 ATGCCAGGGTTCTAAATATATA--CAAAAGGCACCCGGTCTCTTATTACCACCCTGATCG 153044 Query 63384 ATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCA 63443 | || | || || ||| ||||| ||||||| || | | || |||| ||||| Sbjct 153043 ACATACTTGGCAGTACTATCGAAAACTTTCAACATGGGCACCAGTCCACTTGAAGTACCA 152984 Query 63444 TTGGTACCGGAGATATAGCTTCCACTGGCACGAATATT 63481 |||||||| | |||||| ||| | | ||| ||||| Sbjct 152983 TTGGTACCTGCGATATATGATCCTGTAGAACGGATATT 152946 >seq3 Length=1585198 Score = 244 bits (270), Expect = 1e-59 Identities = 607/910 (67%), Gaps = 26/910 (3%) Strand=Plus/Minus Query 32997 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCC 33056 || |||||| || |||||||| || || | |||||||| || ||||| || || Sbjct 913963 AGCCATAACACCAGCCTTTTGGTAATCGGAAACTCTCTTTTCGAAGAAGTTAGTCTTACC 913904 Query 33057 TTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAA 33116 |||| || || || |||||||| || || || ||||||||||| ||||| || ||| | Sbjct 913903 AGCCAAGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTAACATTGTAAATCTTCTTACA 913844 Query 33117 TCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACA 33176 || | || | |||||||| ||||||||||| | ||| ||| | ||||| Sbjct 913843 ACCGAGGGCAACTAATAATCTATCAGCGACGAATTCAACGTATTGACACATTAAATCACA 913784 Query 33177 ATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATA 33235 ||||| |||| | || ||||| | || | || ||| | |||| ||||||| | Sbjct 913783 GTTCATACCTAATAACTTGACTGGCAAGGCATCGGTGAAGTATCTCTT-TTCAATGTCAA 913725 Query 33236 CCGCATCTGTTATAAT---AGATCTAACGGTTTCTTCACTCGGTGGA-TGCAAT--AAAT 33289 | || || || || || || || | |||| || |||| || || || | Sbjct 913724 CAGCTTCGGTGATGATCTTAGCAACAATGCTTTCATC------TGGAGTGTTATTCAAGT 913671 Query 33290 GTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGT 33349 | |||| | ||| || || || ||| | ||| || ||||||| || | ||||| Sbjct 913670 GAGAGAACAATAGACAAGCAAAGTCAGTGTGTAAACCTTCATCTCTACAGATGAATTCGT 913611 Query 33350 TGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATG 33409 | || || || | || ||||||| || | ||| || | ||| || |||||||| || | Sbjct 913610 TAGAGAAAGTTAAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATGGAAGCAAAGG 913551 Query 33410 ATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAACC 33467 | ||||| |||||||| || || || ||||| ||||||| | ||| || || |||| Sbjct 913550 AACCAGAGAAGAAGATACCCTCAACGGCAGCGAAGGCAACCAATCTTTCACCGAATAA-- 913493 Query 33468 GGCGCTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 33524 ||| |||| ||||| || ||||| || ||||| | | | | ||| || || Sbjct 913492 GGCTTCATCATCGGAGATCCATCTTAAGGCCCATTCAGCCTTTTCTCTAATACATGGGAT 913433 Query 33525 CGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGAT 33584 ||| ||||| || || | || | ||| || ||| ||||| ||||| ||||| Sbjct 913432 GTGTTCAATGGCGTTGAATAAGTAATCAGCTTCCTTTGGATCCTTAACGTAAGTGTCGAT 913373 Query 33585 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACA 33644 ||| | || | || || || |||||||| || || || || ||||||||||| Sbjct 913372 CAATAAGGAGTAAGTCTCAGAGTGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACA 913313 Query 33645 TCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTAT 33704 | | || || | || || ||||| | | | || ||| ||||||||||||| || || Sbjct 913312 TTTGGCTTCTGGGATTTGCACTTCAGCAGAGAAGTTTTCAACCAAATTTTCATTGACAAT 913253 Query 33705 TCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGT 33764 || ||| || || || || || || || || || ||| |||||| || | Sbjct 913252 ACCATCAGATGCAGCGAAGAAGGCTAACACTCTAGAGATGAAGTATCTTTCGT-TGTCAT 913194 Query 33765 T-AGT---TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAA 33820 | | | || ||||| || | | || || |||| ||| | |||||| | ||||| | Sbjct 913193 TCAATCTGTTGTTCCAGTCGTGTAAGTCCTTGGATAAATCAATTTCTTCGGCAGTCCAGA 913134 Query 33821 ATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAA 33880 | || || || ||||| || ||||| | |||||| || | ||||| ||||||||| | | Sbjct 913133 AGGAAGCTTCGGCCTTCTTGTACATTTGCCAGATCTCGTGATATTTGATTGGGAATAAGA 913074 Query 33881 CAAATCTATT 33890 | ||||| || Sbjct 913073 CGAATCTCTT 913064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947020902680