Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq5 154 4e-32 seq12 138 3e-27 >seq5 Length=915096 Score = 154 bits (170), Expect = 4e-32 Identities = 1076/1704 (63%), Gaps = 52/1704 (3%) Strand=Plus/Minus Query 363382 TATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGAT 363441 ||| || |||||| | |||||| |||| | ||| ||| ||| | ||| | ||| | Sbjct 39711 TATAATTATTTCGGGTTTAAGACCTTGGAAAGATCTTACTTATTAAGAATCGACGGTAAG 39652 Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 ||| || | || || ||| | ||| | || || ||||||||||| | ||| Sbjct 39651 GTTGCCGAGAGACCTCAACATTTAACCATGAGAGTCGCCATTGGTATCCACGGT---GAT 39595 Query 363502 GTTGATGCC----GCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-TTCACGCAC 363555 | || || | ||||||||| ||||| || | || | | || ||||| ||| Sbjct 39594 AAT-ATCCCAAAGGTGATTGAAACCTATAA--TTTGATGTCTGAGAGATACTTCACTCAC 39538 Query 363556 GCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTT 363615 || | ||||| ||| |||||||| |||| | | ||||| ||||||||||| |||||| Sbjct 39537 GCGTCTCCAACTTTGTTTAATGCTGGTACTCCTCACCCACAAATGTCTTCTTG-TTTCTT 39479 Query 363616 -CTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCT 363674 | |||||||| || ||||| || || || | || || | ||| | |||||||| Sbjct 39478 AGTTGCCATGAAGGATGACTCCATTGAAGGGATTTACGATACTTTGAAGGAATGTGCTCT 39419 Query 363675 TATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACA 363733 ||||| |||| || || || ||||| || ||||||||| | | || || | Sbjct 39418 GATTTCTAAGACCGCTGGTGGTATTGGGTTACACATCCACAATATCAGAGCTACCG-GTT 39360 Query 363734 GTTACATTCGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTT 363792 ||||| |||| || || || ||| || || | |||| ||| | | ||||| Sbjct 39359 CTTACA-TCGCTGGTACTAACGGTACCTCTAACGGTATCATTCCAATGGTGAGAGTGTTC 39301 Query 363793 GACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATG 363852 |||| || || || ||||| || || ||||| ||| | ||| || ||||| || Sbjct 39300 AACAACACCGCCAGATACGTTGATCAAGGTGGTAACAAGAGACCAGGTGCTTTTGCCTTG 39241 Query 363853 TATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGA 363912 || | || || || || ||||| ||||| ||| |||| | | || ||| || Sbjct 39240 TACATTGAACCATGGCACGCTGATATCTTTGATTTTATTGACATTAGAAAGAACCACGGT 39181 Query 363913 AAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATG 363972 || || ||| | | || | ||| ||||| || | ||| | | || || ||| Sbjct 39180 AAGGAAGAAATCAGAGCTAGAGATTTGTTCCCAGCCTTATGGATCCCAGATTTATTCATG 39121 Query 363973 AAGCGCGTGGAGGC---AGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGT 364029 ||| | || || | ||| ||| ||| | | || | |||| ||| ||||||| Sbjct 39120 AAGAGAGTTGAATCTAATGGT--GAA-TGGACTTTGTTCTCCCCATCTGAAGCTCCAGGT 39064 Query 364030 CTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGA 364089 | ||||| | ||||| || | | | | || |||| || ||| || || Sbjct 39063 TTAGGTGATGTCTACGGTGATGAATTCGAAGAATTGTATGAAAGATACGAAAGAGAAGGT 39004 Query 364090 AAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATT 364149 |||| | | || || || || ||| |||||| ||||| | || | || | | Sbjct 39003 AAGGGTAGATCCACTATCAAGGCTCAAAAGTTATGGTACTCCATCTTAGAAGCTCAAACT 38944 Query 364150 GAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAG 364209 ||||| || || || | ||||| ||||| ||| | || ||| || |||||||| || Sbjct 38943 GAGACTGGTACCCCATTCATGTTATACAAGGATGCCTGTAACAAGAAATCCAACCAAAAG 38884 Query 364210 CACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCC 364269 || | |||| ||| || |||| | ||| || ||| |||||||| ||| | Sbjct 38883 AACTTGGGTATGATTAAGTCCTCCAACTTGTGTTGTGAAATTGTTGAATACTCCGATGAA 38824 Query 364270 GACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAA---GAT 364326 | || || || || |||||| | || || || || ||||| || ||||| || ||| Sbjct 38823 CAAGAAACCGCTGTGTGTAACTTGGCTTCCATTGCCCTTCCAGCCTTTGTTGAATCTGAT 38764 Query 364327 G----GTACTTTTG--ACCAC---CAGCATCTTTATGACGTAACCTATCATGCTACTTGC 364377 | | || ||| || || | | | | || | || | || || Sbjct 38763 GAGAAGAACACTTGGTACAACTTTGAAAAGTTACACGAGATCGCCAAGGTTGTCTCTAAG 38704 Query 364378 AATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC--CGAG-CGTTCT 364434 || | | ||| ||||||||| |||||||| ||| | |||| | | || |||||| Sbjct 38703 AACTTGAATAAGATTATCGACAGAAATTATTACCCAGT---TGAAACTGCTAGACGTTCT 38647 Query 364435 AATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATG 364494 || ||| | | | || |||| |||||||| || || | ||||| | || ||| | Sbjct 38646 AACATGAGAAACAGACCTATTGCCCTTGGTGTTCAAGGTTTAGCTGATGCATTCATGTTA 38587 Query 364495 CTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACA 364554 || | || ||||||| || || || ||| | |||| | | ||||||||||| Sbjct 38586 CTGAGAATTCCATTTGACTCTCCAGAAGCTAAATTGTTAAACATTCAAATCTTTGAAACC 38527 Query 364555 ATGTATTTTGCCGCAAT-GACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTC 364613 | || || || | || || ||| ||| | || | || || ||||| Sbjct 38526 CTTTACCATGGTGCTTTAGAGGCCTCCGTCGAATTAGCCATCGAAGAA-GGTAAGTATGA 38468 Query 364614 TACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCAC 364673 |||| ||| || || || ||| || || | || || || ||| ||||| | | Sbjct 38467 AACTTTTGAAGGTTCTCCAGCTTCCCAAGGTATCTTGCAATTCGATTTATGGGGTAAGAA 38408 Query 364674 GCCATCTGTCCGATGGAACTGGGATACGCT--ACGTTCCAACGTTAAGAAGCATGGTACT 364731 |||| ||| |||| ||||||||| | | | || | | || ||||| Sbjct 38407 GCCAACTGATTTATGGGACTGGGATAACTTGAAGGAAAGAA--TCATGACCAATGGTTTA 38350 Query 364732 CGCAACTCCCTCGTTAC-AGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAA 364790 | |||| ||| |||| || || ||||| || ||||||||| | || ||| | || | Sbjct 38349 AGAAACT-CCTTATTACTTGCTCCAATGCCAACTGCTTCTACTTCCCAAATCTTGGGTTA 38291 Query 364791 CAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGA 364850 ||| || || |||||||| | || |||| |||| || | | || || | || || Sbjct 38290 CAATGAATGTTTCGAACCATACACTTCCAATATTTACTCTAGAAGAGTGCTAGCTGGTGA 38231 Query 364851 ATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGA 364910 ||| | | ||||| ||| | | | ||| | |||| || | |||| ||| Sbjct 38230 ATTCCAAATTGTTAACCCATACTTGTTGAGAGATTTGGTTGACCTTGGATTATGGGATGA 38171 Query 364911 CAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCC 364970 | ||||||||| | || || | | ||||||||| | || ||| | ||| |||| Sbjct 38170 CTCTATGAAGAACCACATTATTTCTGATAATGGTTCCATTCAAAACTTGCCAAACGTTCC 38111 Query 364971 AGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTC-CATGCGAACTCTCATTG 365029 || || | || | | || || ||||| ||||||||||| || | || |||||| Sbjct 38110 TGATGAATTAAAACAATTGTATAAGACCGTTTGGGAAATTTCTCAAAAG-TCTATCATTG 38052 Query 365030 ATATGGCGGCCGATCGCGGTGCTT 365053 ||||| | || || | ||||||| Sbjct 38051 ATATGTCTGCTGACAGAGGTGCTT 38028 Score = 93.3 bits (102), Expect = 1e-13 Identities = 210/316 (66%), Gaps = 0/316 (0%) Strand=Plus/Plus Query 363765 TGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG 363824 ||| ||||| |||||| | || || || | |||||| | ||| ||||| |||||||| Sbjct 152996 TGGACTGGTGCCCATGTTGAAAGTTTTCGATAGTACTGCCAAGTATGTCGATCAGGGTGG 153055 Query 363825 AGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGA 363884 ||| | || || ||| ||| ||| | || || |||| ||||||||||| Sbjct 153056 TAATAAGAGACCGGGTGCCTTTTGTATATATTTAGAACCCTGGCATGGTGATATTTTTGA 153115 Query 363885 GTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTA 363944 || | || || |||| ||| || || |||||| | | || | ||| |||| || Sbjct 153116 ATTCTTAGACCTGAGGAAGAACCATGGTAAGGAGGAAGTTAGAGCTAGAGATTTGTTTTA 153175 Query 363945 TGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACT 364004 |||| | ||| || |||| |||||| | || || ||| | |||||| | Sbjct 153176 TGCATTATGGATTCCTGATTTGTTTATGGAAAAAGTTCAGCGGGGTGAAGATTGGTGTTT 153235 Query 364005 CTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCT 364064 |||| || | | | ||||| || || | ||||| | ||||| || | ||| ||||| Sbjct 153236 GTTTTCCCAAGATAAGTGTCCTGGACTCACTGATGTTTATGGTGAGGAGTTTGTGGCTCT 153295 Query 364065 ATACGAAAAGTATGAA 364080 ||| || || |||||| Sbjct 153296 ATATGAGAAATATGAA 153311 >seq12 Length=324105 Score = 138 bits (152), Expect = 3e-27 Identities = 335/506 (66%), Gaps = 26/506 (5%) Strand=Plus/Plus Query 111419 TGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGA 111478 ||| |||||||||||||| || ||||| | || | | |||| || | || | || Sbjct 266662 TGTGAAAATTTGGGATGGTAACGGATCTAGAGAATATTTAGACTCTTTAGGATTAACTGA 266721 Query 111479 CAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGA 111538 | |||||| ||| | || |||||||| ||||| |||||| | |||||||||||||| Sbjct 266722 AAGAAGAGAAGGCGATTTAGGTCCAGTTTATGGATTCCAATGGAGACACTTTGGTGCAGA 266781 Query 111539 CTACAAAACC----ATGCACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATG 111594 || | | |||| || | | || | |||| |||||||||| || Sbjct 266782 GTATACAGATTGTGATGCT-GATTACTCTGGTA---AGGGGTATGATCAATTAGCTAAAA 266837 Query 111595 TCATTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACC 111654 | |||||| | || || || ||| | | | |||||| | ||||||||| | Sbjct 266838 TTATTGATACTTTGAAAAATAATCCATACGATAGAAGAATTATTTTATCTGCATGGAATC 266897 Query 111655 CAAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTAC 111714 || |||||| | |||||||| | |||||||||||| | | || || || ||||| Sbjct 266898 CACCTGCATTCAAGGAAATGGCATTACCACCATGTCATGTGTTTTGTCAATTCTATGTGA 266957 Query 111715 AC---------GACGGG--------ATGCTT-TCATGCCAAATGTATCAGCGATCTGCTG 111756 || || || | | || ||||| ||||||||||| ||||| || Sbjct 266958 ACTTCCCAAAAGATGGAGGTAAACCAAGATTATCATGTCAAATGTATCAAAGATCTTGTG 267017 Query 111757 ATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCG 111816 |||| || | ||||| || || ||||||||| ||| || || | |||| | | || | Sbjct 267018 ATATGGGATTAGGTGTGCCTTTCAATATTGCATCTTATTCATTATTGACTTACATGATTG 267077 Query 111817 CTCATTTTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGCGCATGTTT 111876 |||| || || | |||| ||||||||||||||| ||| || ||| | ||||| | Sbjct 267078 CTCACATTGTGGATATGGAACCAGGTGAATTCATTCACACTATGGGTGATTCTCATGTGT 267137 Query 111877 ACACAAACCACATTGATGCACTTAAA 111902 || | ||| |||||||| | ||| Sbjct 267138 ACTGTGATCACGTTGATGCATTGAAA 267163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353215917986