Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq5 342 6e-89 seq3 215 7e-51 >seq5 Length=915096 Score = 342 bits (378), Expect = 6e-89 Identities = 1371/2138 (64%), Gaps = 45/2138 (2%) Strand=Plus/Plus Query 61841 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 61900 || || | |||||||||||||| ||||| |||| || || | | |||||||| || Sbjct 37868 TTATCAACTGTGAATTGAATGGCAGCGGCGGCGGCTTGAGTTCTCAAGTAGTACATACCG 37927 Query 61901 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 61960 || |||| ||| |||| ||||| || ||||| || | || | | ||| Sbjct 37928 GTCTTTAAACCCTTCTTCCAACCGTAGAAGTGCATGGAAGTCAACTTACCCATAGTTGGA 37987 Query 61961 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62020 || | ||||| |||||||||||| |||||| | | | || || ||||| |||| | Sbjct 37988 GCTCTCAAGTGGATGTTCATAGATTGAGATTGATCAACGTAAGCACCTCTGTCAGCAGAC 38047 Query 62021 ATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 62080 || | || || | |||||| | ||||||||||| || ||||| | | | || | || Sbjct 38048 ATATCAATGATAGACTTTTGAGAAATTTCCCAAACGGTCTTATACAATTGTTTTAATTCA 38107 Query 62081 TCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATC 62137 || |||| ||||| || |||||||| ||| ||| | ||||| ||||| || Sbjct 38108 TCAGGAACGTTTGGCAAGTTTTGAATGGAACCATTATCAGAAATAATGTGGTTCTTCATA 38167 Query 62138 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 62197 |||| ||||||| || ||| |||| | | | || ||||| | ||| Sbjct 38168 GAGTCATCCCATAATCCAAGGTCAACCAAATCTCTCAACAAGTATGGGTTAACAATTTGG 38227 Query 62198 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 62257 ||||| |||| | ||||| | || ||||||||| || || ||||| | | | ||| Sbjct 38228 AATTCACCAGCTAGCACTCTTCTAGAGTAAATATTGGAAGTGTATGGTTCGAAACATTCA 38287 Query 62258 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 62317 || | ||||| ||||| | ||| || ||||| ||||| || || | ||||| ||| Sbjct 38288 TTGTAACCCAAGATTTGGGAAGTAGAAGCAGTTGGCATTGGAGCAAGTAATAAGGAGTTT 38347 Query 62318 CTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGT-TCCCAATTCCAAAGATCCGACGG 62376 || | ||| | || ||||| | || || | || | ||||| | ||| | ||| | || Sbjct 38348 CTTAAACCATTGGTCATGATTCTTTCCTTCA-AGTTATCCCAGTCCCATAAATCAGTTGG 38406 Query 62377 --TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 62434 | || ||| | ||||| | || || ||| || | Sbjct 38407 CTTCTTACCCCATAAATCGAA--TTGCAAGATACCTTGGGAAGCTGGAGAACCTTCAAAA 38464 Query 62435 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 62494 || || || ||||| | |||| ||| |||||||| ||||| | ||| Sbjct 38465 GTTTCATACTTACCTTCTTCGATGGCTAATTCGACGGAGGCCTCTAAAGCACCATGGTAA 38524 Query 62495 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTT 62554 | |||||| ||||| | | |||| || ||||| | ||||||||| | | | Sbjct 38525 AGGGTTTCAAAGATTTGAATGTTTAACAATTTAGCTTCTGGAGAGTCAAATGGA-ATTCT 38583 Query 62555 AAGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 62613 || | || || || || ||||| ||||||||||||| | |||||||| | |||| | Sbjct 38584 CAGTAACATGAATGCATCAGCTAAACCTTGAACACCAAGGGCAATAGGTCTGTTTCTCAT 38643 Query 62614 ATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 62673 ||||| | ||| | || || |||||||| | || ||||| ||||| | | | Sbjct 38644 GTTAGAACGTCTAGCAGTTTCAACTGGGTAATAATTTCTGTCGATAATCTTATTCA-AGT 38702 Query 62674 TCTGACA-ATTACTTTGACCACATCCTTCAGTTTGAGAAAAT-----CAAATCGCC---- 62723 ||| | | | || ||| | | || | | || ||| | ||| | | Sbjct 38703 TCTTAGAGACAACCTTGGCGATCTCGTGTAACTTTTCAAAGTTGTACCAAGTGTTCTTCT 38762 Query 62724 CATCTATTACAAACATG--TTCAATG-CAACAGATGCCAGATTACAAACGGCTACCTCAT 62780 |||| | ||| | | | || | ||| || |||| ||||| || || || | Sbjct 38763 CATCAGATTCAACAAAGGCTGGAAGGGCAATGGAAGCCAAGTTACACACAGCGGTTTCTT 38822 Query 62781 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 62840 |||| | |||| | || ||| || | || |||| || | || || | Sbjct 38823 GTTCATCGGAGTATTCAACAATTTCACAACACAAGTTGGAGGACTTAATCATACCCAAGT 38882 Query 62841 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTT 62900 | | ||| || || |||||||| |||||||| || | |||||||| |||||||| | Sbjct 38883 TCTTTTGGTTGGATTTCTTGTTACAGGCATCCTTGTATAACATGAATGGGGTACCAGTCT 38942 Query 62901 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATC 62960 || | |||| ||||| || | | ||| | | ||||||| || | ||| | | Sbjct 38943 CAGTTTGAGCTTCTAAGATGGAGTACCATAACTTTTGAGCCTTGATAGTGGATCTA---C 38999 Query 62961 TCTT---TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGT 63017 ||| ||||||||||||| | ||||||| |||||| || || || | |||| Sbjct 39000 CCTTACCTTCTCTTTCGTATCTTTCATACAATTCTTCGAATTCATCACCGTAGACATCAC 39059 Query 63018 CCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63077 | | || ||| |||| || | | ||| | ||| || || | | | |||| | Sbjct 39060 CTAAACCTGGAGCTTCAGATGGGGAGAACAAAGTCCATTCACCATTAGATTCAACTCTCT 39119 Query 63078 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 63137 |||| || | ||| || ||||| | ||| || | |||||| | ||| ||| || | Sbjct 39120 TCATGAATAAATCTGGGATCCATAAGGCTGGGAACAAATCTCTAGCTCTGATTTCTTCCT 39179 Query 63138 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63197 | || |||||| ||| || | || | | ||||||| ||||| ||||| | || Sbjct 39180 TACCGTGGTTCTTTCTAATGTCAATAAAATCAAAGATATCAGCGTGCCATGGTTCAATGT 39239 Query 63198 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63257 | | ||| | | | || || | ||||| || || ||||| | |||||| |||||||| | Sbjct 39240 ACAAGGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAACGTATCTGGCGGTGTTGT 39299 Query 63258 TATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGC 63317 | | ||||||| ||||||||| ||||| || || ||||| || || || | ||| || Sbjct 39300 TGAACACTCTCACCATTGGAATGATACCGTTAGAGGTACCGTTAGTACCAGCGATGTAAG 39359 Query 63318 TTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377 || | || | ||||| || || || || || || || | ||||| || | Sbjct 39360 AACCGGTAGCTCTGATATTGTGGATGTGTAACCCAATACCACCAGCGGTCTTAGAAATCA 39419 Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437 || ||| || || ||||| || || || || || |||||| ||||| || || Sbjct 39420 GAGCACATTCCTTCAAAGTATCGTAAATCCCTTCAATGGAGTCATCCTTCATGGCAACTA 39479 Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497 ||||| ||||||||| | || ||| || |||||||| || || ||||| |||| Sbjct 39480 AGAAACAAGAAGACATTTGTGGGTGAGGAGTACCAGCATTAAACAAAGTTGGAGACGCGT 39539 Query 63498 GAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC--TGAGTCTATATCCCA 63555 |||| || || | ||||| | | ||| || || ||||| | | | ||| | || Sbjct 39540 GAGTGAAGTATCTCTCAGACATCAAATTATAGGTTTCAATCACCTTTGGGATAT-TATCA 39598 Query 63556 TTGATGAATTCCTACTGCGACACGCAT--TAACATGTGCTGAGGTCTTTCAACGATCTTG 63613 | || || || | ||||| | ||| | | |||| |||||||| || | | ||| Sbjct 39599 CCG-TGGATACCAATGGCGACTCTCATGGTTAAATGT--TGAGGTCTCTCGGCAACCTTA 39655 Query 63614 TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TG 63671 || ||| | || ||||| ||| ||||||| || ||||| || ||||| || || || Sbjct 39656 CCGTCGATTCTTAATAAGTAAGATCTTTCCAAGGTCTTAAACCCGAAATAATTATAACTG 39715 Query 63672 AAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACAT 63731 ||| || || || |||| ||| | ||||| | || || | | || | || | || Sbjct 39716 AAA--TCACGGTCATAAACGATAGCAGAGTTTAATTCTTCACTGTGCTTTTGGACAATAT 39773 Query 63732 CCATGGTAATACTT-GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTG 63790 | || || ||| || | ||||| | |||||||||| || || ||||| || || Sbjct 39774 CGTAAGT-ATCCTTGGACACCATAGGGGATGGTTTCCCATTCTTTGGGTTGACGTAAGTG 39832 Query 63791 AATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACG 63850 | | | || || |||| | || | ||| | |||| ||||| | || || | | Sbjct 39833 TAAAGTTGTTCAATAACTTGAGAGAACTGCTTTGTCGTTTGCTTGTGCAAGTTAGAGATG 39892 Query 63851 GCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATT 63910 || |||||||| |||| || ||||||||| ||||| ||||| | || || || Sbjct 39893 GCGATTCTAGCAGCTAAAACGGCATAATCTGGATGAACAGTAGTCATATAAGCAGCAGTT 39952 Query 63911 TCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACC 63948 || || |||| | |||||||| | || || ||||| Sbjct 39953 TCAGCAGCCAAGTTATCCAATTCAATGGTGGTCACACC 39990 Score = 109 bits (120), Expect = 7e-19 Identities = 231/343 (67%), Gaps = 4/343 (1%) Strand=Plus/Minus Query 62996 AACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCAC 63055 ||||| || || |||||| ||||||||||| | ||| | | | ||| |||| Sbjct 153286 AACTCCTCACCATAAACATCAGTGAGTCCAGGACACTTATCTTGGGAAAACAAACACCAA 153227 Query 63056 TCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGA 63115 ||| | | || ||| || |||||| | |||||||||||| | || ||| | | Sbjct 153226 TCTTCACCCCGCTGAACTTTTTCCATAAACAAATCAGGAATCCATAATGCATAAAACAAA 153167 Query 63116 TCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATA 63175 ||||| | |||| |||||| || || ||||| | || || | ||| | | |||| Sbjct 153166 TCTCTAGCTCTAACTTCCTCCTTACCATGGTTCTTCCTCAGGTCTAAGAATTCAAAAATA 153107 Query 63176 TCAGAATGCCACGGTTCCAAGTATATGGCCATAA--CTCCAGGCCGTTTGTTTCCTCCCT 63233 ||| |||||| ||||| || ||||| || || | || || | || || || |||| Sbjct 153106 TCACCATGCCAGGGTTCTAAATATATA--CAAAAGGCACCCGGTCTCTTATTACCACCCT 153049 Query 63234 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATG 63293 |||| | || | || || ||| ||||| ||||||| || | | ||| | || | Sbjct 153048 GATCGACATACTTGGCAGTACTATCGAAAACTTTCAACATGGGCACCAGTCCACTTGAAG 152989 Query 63294 TACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATT 63336 |||||||||| |||| |||||| ||| | | ||| ||||| Sbjct 152988 TACCATTGGTACCTGCGATATATGATCCTGTAGAACGGATATT 152946 >seq3 Length=1585198 Score = 215 bits (238), Expect = 7e-51 Identities = 605/912 (66%), Gaps = 30/912 (3%) Strand=Plus/Minus Query 32354 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACC 32413 || |||||| || |||||||| || || | |||||||| || ||||| ||||| Sbjct 913963 AGCCATAACACCAGCCTTTTGGTAATCGGAAACTCTCTTTTCGAAGAAGTTAGTCTTACC 913904 Query 32414 TTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAA 32473 | || || || || |||||||| |||||||| ||||||||||| ||||| || ||| | Sbjct 913903 AGCCAAGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTAACATTGTAAATCTTCTTACA 913844 Query 32474 TCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACA 32533 || | || | |||||||| ||||| ||||| | ||| ||| | ||||| Sbjct 913843 ACCGAGGGCAACTAATAATCTATCAGCGACGAATTCAACGTATTGACACATTAAATCACA 913784 Query 32534 ATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGA 32592 ||||| |||| | || ||||| | || | || ||| | |||| |||||| | Sbjct 913783 GTTCATACCTAATAACTTGACTGGCAAGGCATCGGTGAAGTATCTCTT-TTCAATGTCAA 913725 Query 32593 CCGCGTCTGTTATAATAGATCTTA----CTGTTTCTTCACTCGGTGGA-TACAAT--AAA 32645 | || || || || ||||||| | | |||| || |||| | || || Sbjct 913724 CAGCTTCGGTGAT----GATCTTAGCAACAATGCTTTCA-TC--TGGAGTGTTATTCAAG 913672 Query 32646 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 32705 || |||| | ||| || || || ||||| ||| || ||||||| || |||||| Sbjct 913671 TGAGAGAACAATAGACAAGCAAAGTCAGTGTGTAAACCTTCATCTCTACAGATGAATTCG 913612 Query 32706 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 32765 || || || || | || ||||||| || | ||| || | ||| || ||||| ||||| Sbjct 913611 TTAGAGAAAGTTAAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATGGAAGCAAAG 913552 Query 32766 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAAC 32823 || ||||| ||||| || || || || || || ||||||| | ||| || || |||| Sbjct 913551 GAACCAGAGAAGAAGATACCCTCAACGGCAGCGAAGGCAACCAATCTTTCACCGAATAA- 913493 Query 32824 CGGCGCTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA 32880 ||| |||| ||||| || ||||| || ||||| | | | | ||| || | Sbjct 913492 -GGCTTCATCATCGGAGATCCATCTTAAGGCCCATTCAGCCTTTTCTCTAATACATGGGA 913434 Query 32881 T-TGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCA 32939 | ||| || || || || || | || | ||| || ||| ||||| || || || Sbjct 913433 TGTGT-TCAATGGCGTTGAATAAGTAATCAGCTTCCTTTGGATCCTTAACGTAAGTGTCG 913375 Query 32940 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAG 32999 ||||| | || | || || || |||||||| || ||||| || |||||||| Sbjct 913374 ATCAATAAGGAGTAAGTCTCAGAGTGTATGTTTTCCATCATGATTTGGAAACCGTAGAAA 913315 Query 33000 CATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACT 33059 ||| | || || | || || ||||| | | | || ||| | ||||||||||| || Sbjct 913314 CATTTGGCTTCTGGGATTTGCACTTCAGCAGAGAAGTTTTCAACCAAATTTTCATTGACA 913255 Query 33060 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGT 33119 || || ||| || || || || || || || || || ||| |||||| || Sbjct 913254 ATACCATCAGATGCAGCGAAGAAGGCTAACACTCTAGAGATGAAGTATCTTTCGT-TGTC 913196 Query 33120 GTT-AGT---TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCA 33175 || | | || ||||| || | | || || |||| ||| | |||||| | ||||| Sbjct 913195 ATTCAATCTGTTGTTCCAGTCGTGTAAGTCCTTGGATAAATCAATTTCTTCGGCAGTCCA 913136 Query 33176 AAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAAT 33235 || || || || ||||| || ||||| | |||||| || ||||||| ||||| || | Sbjct 913135 GAAGGAAGCTTCGGCCTTCTTGTACATTTGCCAGATCTCGTGATATTTGATTGGGAATAA 913076 Query 33236 AACAAATCTATT 33247 || ||||| || Sbjct 913075 GACGAATCTCTT 913064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631817830800