Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq3 132 4e-26 seq14 118 9e-22 seq5 82.4 7e-11 >seq3 Length=1585198 Score = 132 bits (146), Expect = 4e-26 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| || || ||||| ||||||| | || || || || ||| Sbjct 1231334 ATGCAAATTTTTGTTAAGACCTTAACAGGTAAGACCATCACTTTAGAGGTCGAATCCTCT 1231393 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||||| || || || ||| || ||| ||||| ||||| || |||||||| | Sbjct 1231394 GACACTATTGA--CAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGATC 1231451 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | || || ||||| || ||||||||||| | | | || || |||||||| Sbjct 1231452 AACAAAGATTGATCTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTGTCCGATTACA 1231511 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | || ||||| |||||||| |||| || || |||| | ||||| || Sbjct 1231512 ACATCCAAAAGGAATCCACTTTACACTTGGTCTTAAGATTGAGAGGTGG 1231560 >seq14 Length=138463 Score = 118 bits (130), Expect = 9e-22 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| || || ||||| ||||||| | || || || || ||| Sbjct 121010 ATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTAGAGGTTGAATCCTCT 120951 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||||| || || || ||| | || | ||| || || ||||| || |||||||| Sbjct 120950 GACACTATTGA--CAATGTCAAGTCTAAGATTCAA-GATAAGGAAGGTATCCCACCTGAT 120894 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| | | || ||||| || || ||||||||||||| | | ||| | |||||| Sbjct 120893 CAACAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGATTAC 120834 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || |||||||| ||||| || | || || || |||| | ||||| || Sbjct 120833 AACATTCAAAAGGAATCAACCTTGCACTTGGTTTTAAGATTGAGAGGTGG 120784 >seq5 Length=915096 Score = 82.4 bits (90), Expect = 7e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 25083 AAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAA 25142 |||||| ||||| ||||| || ||||| || ||||| | | || ||||| || || Sbjct 587708 AAAATCCAAGACAAGGAAGGTATCCCACCAGATCAACAAAGATTAATCTTTGCTGGTAAG 587649 Query 25143 CAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACAT 25202 ||||||||||||| | | ||| | ||| ||||| || ||||| |||||||| | || Sbjct 587648 CAATTAGAAGATGGTAGAACTCTTTCCGACTACAACATCCAAAAGGAATCCACCTTGCAC 587589 Query 25203 TTAGTGCTAAGGCTAAGAGGAGG 25225 || || | || ||||||| || Sbjct 587588 TTGGTCTTGAGATTAAGAGGTGG 587566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327878532745