Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016-
03-01] 23 sequences; 12,320,962 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq3 132 4e-26
seq14 118 9e-22
seq5 82.4 7e-11
>seq3
Length=1585198
Score = 132 bits (146), Expect = 4e-26
Identities = 168/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||| || || ||||| ||||||| | || || || || |||
Sbjct 1231334 ATGCAAATTTTTGTTAAGACCTTAACAGGTAAGACCATCACTTTAGAGGTCGAATCCTCT 1231393
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||||| || || || ||| || ||| ||||| ||||| || |||||||| |
Sbjct 1231394 GACACTATTGA--CAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGATC 1231451
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | || || ||||| || ||||||||||| | | | || || ||||||||
Sbjct 1231452 AACAAAGATTGATCTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTGTCCGATTACA 1231511
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| || ||||| |||||||| |||| || || |||| | ||||| ||
Sbjct 1231512 ACATCCAAAAGGAATCCACTTTACACTTGGTCTTAAGATTGAGAGGTGG 1231560
>seq14
Length=138463
Score = 118 bits (130), Expect = 9e-22
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| || || ||||| ||||||| | || || || || |||
Sbjct 121010 ATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTAGAGGTTGAATCCTCT 120951
Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|||||||| || || || ||| | || | ||| || || ||||| || ||||||||
Sbjct 120950 GACACTATTGA--CAATGTCAAGTCTAAGATTCAA-GATAAGGAAGGTATCCCACCTGAT 120894
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| | | || ||||| || || ||||||||||||| | | ||| | ||||||
Sbjct 120893 CAACAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGATTAC 120834
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| |||||||| ||||| || | || || || |||| | ||||| ||
Sbjct 120833 AACATTCAAAAGGAATCAACCTTGCACTTGGTTTTAAGATTGAGAGGTGG 120784
>seq5
Length=915096
Score = 82.4 bits (90), Expect = 7e-11
Identities = 104/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 25083 AAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAA 25142
|||||| ||||| ||||| || ||||| || ||||| | | || ||||| || ||
Sbjct 587708 AAAATCCAAGACAAGGAAGGTATCCCACCAGATCAACAAAGATTAATCTTTGCTGGTAAG 587649
Query 25143 CAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACAT 25202
||||||||||||| | | ||| | ||| ||||| || ||||| |||||||| | ||
Sbjct 587648 CAATTAGAAGATGGTAGAACTCTTTCCGACTACAACATCCAAAAGGAATCCACCTTGCAC 587589
Query 25203 TTAGTGCTAAGGCTAAGAGGAGG 25225
|| || | || ||||||| ||
Sbjct 587588 TTGGTCTTGAGATTAAGAGGTGG 587566
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327878532745
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |