Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3 268 1e-66 >seq3 Length=1585198 Score = 268 bits (296), Expect = 1e-66 Identities = 613/906 (68%), Gaps = 35/906 (4%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 |||||||||| |||||||| || |||| | ||||| ||||| || ||||| || | Sbjct 913960 CATAACACCAGCCTTTTGGTAATCGGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCAGC 913901 Query 92850 CAAAGATATCGAATTCACTA-GT-GATTGGATTCTTGGCGTTATAATACTTTTCAC---C 92904 ||| || || | || | || || ||| || | | || ||| ||| | || | Sbjct 913900 CAAGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTAACATTGTAAATCTTCTTACAACC 913841 Query 92905 GAT--CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCA 92962 || ||||| |||||||||||||| || ||||| | ||| ||| |||| |||||| Sbjct 913840 GAGGGCAACT-----AATAATCTATCAGCGACGAATTCAACGTATTGACACATTAAATCA 913786 Query 92963 CAATTCATTCCTAGAAGACGT-ACAGGTAGAGCGTCGGTCAAGAAA-TCTTTCTCGATTA 93020 || ||||| |||| | || | || || | || ||||| ||| | ||||| || || Sbjct 913785 CAGTTCATACCTAATA-ACTTGACTGGCAAGGCATCGGTGAAGTATCTCTTT-TCAATGT 913728 Query 93021 CAACGGCTTCTTTCAAGATTTCTATTACTCTACT---ATTTGGTGGTTTTTGTACGACAT 93077 |||| ||||| | | ||| | || | || || ||| | || | | | | Sbjct 913727 CAACAGCTTCGGTGATGATCTTAGCAACAATGCTTTCATCTGGAGTGTTATTCAAGTGAG 913668 Query 93078 AATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCAT 93137 | | ||| || || |||||||| || ||||||||||| |||| | || || || | Sbjct 913667 A---GAACAATAGACAAGCAAAGTCAGTGTGTAAACCTTCATCTCTACAGATGAATTCGT 913611 Query 93138 TGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAAC 93197 | ||| ||||||||||| | | |||| ||||| | ||| || || |||||||| Sbjct 913610 TAGAGAAAGTTAAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATGGAAGCAAAGG 913551 Query 93198 TACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTG 93257 |||||| || || ||||| || ||||| || || || || | | ||| | || | Sbjct 913550 AACCAGAGAAGAAGATACCCTCAACGGCAGCGAAGGCAACCAATCTTTCACCGAATAAGG 913491 Query 93258 CGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTG 93317 | || | | ||||||| |||| ||||| || || |||| ||||||| || | || Sbjct 913490 CTTCATCATCGGAGATCCATCTTAAGGCCCATTCAGCCTTTTCTCTAATACATGGGA-TG 913432 Query 93318 T-TTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATT 93376 | ||| || ||||| |||| |||||| || | | ||| | ||| || ||||| Sbjct 913431 TGTTCAATGGCGTTGAATAAGTAATCAGCTTCCTTTGGATCCTTAACGTAAGTGTCGATC 913372 Query 93377 AACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACAT 93436 || | || || | ||||| || | || ||||| |||||||| |||||||||||| Sbjct 913371 AATAAGGAGTAAGTCTCAGAGTGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACAT 913312 Query 93437 CTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATA 93496 | ||||| | ||| |||||||| ||| || | || || | |||||||||||| ||| Sbjct 913311 TTGGCTTCTGGGATTTGCACTTCAGCAGAGAAGTTTTCAACCAAATTTTCATTGACAATA 913252 Query 93497 CCATCGGATGCTGCaaaaaaaGCCAATATATGCTTT----ATAAAATGTTTCTCATCATC 93552 ||||| ||||| || || || || || | || | || || | | | || | || Sbjct 913251 CCATCAGATGCAGCGAAGAAGGCTAACA----CTCTAGAGATGAAGTATCTTTCGTTGTC 913196 Query 93553 -TTTAAGC--TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCA 93609 || || | || | ||| ||| || || || || | ||| | ||||||| ||||||| Sbjct 913195 ATTCAATCTGTTGTTCCAGTCGTGTAAGTCCTTGGATAAATCAATTTCTTCGGCAGTCCA 913136 Query 93610 AAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATAT 93669 || || ||||| || || |||||||| | ||| || || ||||||| ||||| |||| Sbjct 913135 GAAGGAAGCTTCGGCCTTCTTGTACATTTGCCAGATCTCGTGATATTTGATTGGGAATAA 913076 Query 93670 GACAAA 93675 ||| || Sbjct 913075 GACGAA 913070 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/102 (79%), Gaps = 4/102 (4%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| ||||||||||||||||||||| ||| || | | ||| | | ||||| ||||||| Sbjct 290096 CAGTTTGGCCGAGTGGTCTAAGGCGTCAGGTTAAGGTCCTGATCTCTTCGGGGGCGTGGG 290037 Query 126328 TTCGAACCCCACACCTGACA--AA--TTATTATTGGAATTTT 126365 ||||||||||||| ||| || || || || || ||||||| Sbjct 290036 TTCGAACCCCACAACTGTCATGAATTTTTTTTTTTGAATTTT 289995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860639902520