Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq3 176 8e-39 seq14 158 2e-33 seq5 127 4e-24 >seq3 Length=1585198 Score = 176 bits (194), Expect = 8e-39 Identities = 171/220 (78%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || |||||||||| ||||| || ||||||||||| |||||||| | || || || ||| Sbjct 1231545 AAGACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAATCGGACAAGGTTCTACCGTCT 1231486 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 ||||| ||||| |||||||| || | ||||||||| || ||||| || |||||||||||| Sbjct 1231485 TCTAATTGCTTACCGGCGAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTGTCT 1231426 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || ||||| | |||||| || || ||||| | ||||| || || || |||||||| Sbjct 1231425 TGGATCTTGGACTTGACATTGTCAATAGTGTCAGAGGATTCGACCTCTAAAGTGATGGTC 1231366 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCTAT 68469 || || || | |||||| || || || ||||| || ||| Sbjct 1231365 TTACCTGTTAAGGTCTTAACAAAAATTTGCATGTTGTTAT 1231326 >seq14 Length=138463 Score = 158 bits (174), Expect = 2e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || |||||||| | || || || ||||| ||||| ||||| || | || || |||||| Sbjct 120799 AAAACCAAGTGCAAGGTTGATTCCTTTTGAATGTTGTAATCAGATAAAGTTCTACCATCT 120858 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 ||||| ||||| || || || || | ||||||||| || ||||| || |||||||| ||| Sbjct 120859 TCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGGATACCTTCCTTATCT 120918 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 |||||||| | |||||| || || ||||| | ||||| || || || |||||||| Sbjct 120919 TGAATCTTAGACTTGACATTGTCAATAGTGTCAGAGGATTCAACCTCTAAAGTGATGGTC 120978 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | |||||| ||||| || ||||| Sbjct 120979 TTACCAGTTAAGGTCTTAACGAAAATTTGCAT 121010 >seq5 Length=915096 Score = 127 bits (140), Expect = 4e-24 Identities = 127/165 (77%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| | ||||| || ||||||||||| || ||||| || || || ||||| Sbjct 587580 CAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTACCATC 587639 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||| ||||| || || || || | ||||||||| || ||||| || ||||||||||| Sbjct 587640 TTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGGGATACCTTCCTTGTC 587699 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 ||| || || | ||||| || ||||| || | ||||| || Sbjct 587700 TTGGATTTTAGATTTGACATTGTCAATGGTATCAGAGGATTCAAC 587744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622135033560