Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016-
03-01] 23 sequences; 12,320,962 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq3 104 6e-17
seq1 84.2 5e-11
>seq3
Length=1585198
Score = 104 bits (114), Expect = 6e-17
Identities = 143/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| |||||||| || || |||| | || | |||||||||||||| || || |||||
Sbjct 1231525 TTCCTTTTGGATGTTGTAATCGGACAAGGTTCTACCGTCTTCTAATTGCTTACCGGCGAA 1231466
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||||| | |||||| | |||||| ||||| || || ||||| || | || || ||
Sbjct 1231465 GATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATT 1231406
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| |||| || ||||| || || | ||||| ||||| || || | ||||| ||
Sbjct 1231405 GTCAATAGTGTCAGAGGATTCGACCTCTAAAGTGATGGTCTTACCTGTTAAGGTCTTAAC 1231346
Query 288462 GAATATCTGCATTATGTTAT 288481
|| || ||||| ||||||
Sbjct 1231345 AAAAATTTGCATGTTGTTAT 1231326
>seq1
Length=1922986
Score = 84.2 bits (92), Expect = 5e-11
Identities = 128/180 (71%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 135623 TGGGTTATTTTCGATGAAGTTCACTATATCAATGATAAGTCTCGAGGTTCCGTGTGGGAA 135682
||||| || || ||||||||||| ||||| | ||||| ||| ||||| ||||||||
Sbjct 1814119 TGGGTCATCTTTGATGAAGTTCATTATATGAGAGATAAATCTAGAGGTGTTGTGTGGGAG 1814060
Query 135683 GAATCGATAATTCTGATGCCGGATACGATGCGTGCTGTGTTTTTGTCAGCAACGGTTCCG 135742
||| | || ||| | | || |||| | | | | |||||||||||| || || | |||
Sbjct 1814059 GAAACAATCATTTTATTACCTGATAAGGTTCATTATGTGTTTTTGTCTGCTACAATCCCG 1814000
Query 135743 AACGCGGTTGAATTTTCCAAGTGGTTTTCGAAGTTGAAGAATCATCCA-GTCGATGTTGT 135801
|| || | |||||| | | ||| ||| || | | ||||| ||| ||| |||| ||
Sbjct 1813999 AATGCTATGGAATTTGCTGAATGGATTTGTAAAATCCATAATCAACCATGTC-ATGTGGT 1813941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179654052370594
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |