Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq3 104 6e-17 seq1 84.2 5e-11 >seq3 Length=1585198 Score = 104 bits (114), Expect = 6e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || || |||| | || | |||||||||||||| || || ||||| Sbjct 1231525 TTCCTTTTGGATGTTGTAATCGGACAAGGTTCTACCGTCTTCTAATTGCTTACCGGCGAA 1231466 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | |||||| | |||||| ||||| || || ||||| || | || || || Sbjct 1231465 GATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATT 1231406 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || ||||| || || | ||||| ||||| || || | ||||| || Sbjct 1231405 GTCAATAGTGTCAGAGGATTCGACCTCTAAAGTGATGGTCTTACCTGTTAAGGTCTTAAC 1231346 Query 288462 GAATATCTGCATTATGTTAT 288481 || || ||||| |||||| Sbjct 1231345 AAAAATTTGCATGTTGTTAT 1231326 >seq1 Length=1922986 Score = 84.2 bits (92), Expect = 5e-11 Identities = 128/180 (71%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 135623 TGGGTTATTTTCGATGAAGTTCACTATATCAATGATAAGTCTCGAGGTTCCGTGTGGGAA 135682 ||||| || || ||||||||||| ||||| | ||||| ||| ||||| |||||||| Sbjct 1814119 TGGGTCATCTTTGATGAAGTTCATTATATGAGAGATAAATCTAGAGGTGTTGTGTGGGAG 1814060 Query 135683 GAATCGATAATTCTGATGCCGGATACGATGCGTGCTGTGTTTTTGTCAGCAACGGTTCCG 135742 ||| | || ||| | | || |||| | | | | |||||||||||| || || | ||| Sbjct 1814059 GAAACAATCATTTTATTACCTGATAAGGTTCATTATGTGTTTTTGTCTGCTACAATCCCG 1814000 Query 135743 AACGCGGTTGAATTTTCCAAGTGGTTTTCGAAGTTGAAGAATCATCCA-GTCGATGTTGT 135801 || || | |||||| | | ||| ||| || | | ||||| ||| ||| |||| || Sbjct 1813999 AATGCTATGGAATTTGCTGAATGGATTTGTAAAATCCATAATCAACCATGTC-ATGTGGT 1813941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654052370594