Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq3 134 1e-26 seq14 116 3e-21 seq5 89.7 4e-13 >seq3 Length=1585198 Score = 134 bits (148), Expect = 1e-26 Identities = 170/232 (73%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||||||||| || || || | || || || ||||| |||||||||||| | Sbjct 1231560 CCACCTCTCAATCTTAAGACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAATCG--G 1231503 Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | || |||| ||||||||||||| || || ||| | ||||| | ||||| || || Sbjct 1231502 ACAAGGTTCTACCGTCTTCTAATTGCTTACCGGCGAAGATCAATCTTTGTTGATCAGGTG 1231443 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 | || ||||||||||| || ||| || ||| | || ||||| || ||| | Sbjct 1231442 GGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAGGATTCGA 1231383 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 | ||||| || ||||| |||||||| | || || |||||||||||||| || Sbjct 1231382 CCTCTAAAGTGATGGTCTTACCTGTTAAGGTCTTAACAAAAATTTGCATGTT 1231331 >seq14 Length=138463 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||||||||| || || | ||| || || ||||| ||||||||||| Sbjct 120784 CCACCTCTCAATCTTAAAACCAAGTGCAAGGTTGATTCCTTTTGAATGTTGTAATCAGAT 120843 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| | ||||||||||| || ||||| | || || | ||||| || ||| Sbjct 120844 AAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGG 120903 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || |||||||| || ||| || || ||| | || ||||| || ||| || Sbjct 120904 ATACCTTCCTTATCTTGAATCTTAGACTTGACATTGTCAATAGTGTCAGAGGATTCAACC 120963 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| || ||||| ||||| || | || || || ||||||||||| Sbjct 120964 TCTAAAGTGATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCAT 121010 >seq5 Length=915096 Score = 89.7 bits (98), Expect = 4e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||||| || || || || | ||| || || ||||| |||||||| ||| Sbjct 587566 CCACCTCTTAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAA 587625 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| | ||||||||||| || ||||| | || || | ||||| || ||| Sbjct 587626 AGAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGGG 587685 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATC 15116 || ||||||||||| ||||| ||| ||| | || || ||||| Sbjct 587686 ATACCTTCCTTGTCTTGGATTTTAGATTTGACATTGTCAATGGTATC 587732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391899818555