Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 9e-16 seq14 89.7 5e-13 >seq3 Length=1585198 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 45144 GTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCT 45203 || |||||||||||||| || |||||| | |||| || || || ||||| || || Sbjct 1231530 GTGGATTCCTTTTGGATGTTGTAATCGGACAAGGTTCTACCGTCTTCTAATTGCTTACCG 1231471 Query 45204 GCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTG 45263 ||| | ||||||| ||| || || || || || ||||| || ||||| || || ||| Sbjct 1231470 GCGAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTG 1231411 Query 45264 ATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTT 45323 | || | ||||| || || ||||| || | ||| | || || || |||| || Sbjct 1231410 ACATTGTCAATAGTGTCAGAGGATTCGACCTCTAAAGTGATGGTCTTACCTGTTAAGGTC 1231351 Query 45324 TTTACAAAAATTTGCAT 45340 || |||||||||||||| Sbjct 1231350 TTAACAAAAATTTGCAT 1231334 >seq14 Length=138463 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 |||| |||||||||||||| || || ||||| | ||| || ||| || ||||| Sbjct 120808 TGCAAGGTTGATTCCTTTTGAATGTTGTAATCAGATAAAGTTCTACCATCTTCTAATTGC 120867 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | || |||| ||| || || || || || ||||| ||||||||||| || Sbjct 120868 TTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGGATACCTTCCTTATCTTGAATCTTA 120927 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 |||| || | ||||| || || || || || | ||| | || || || ||| Sbjct 120928 GACTTGACATTGTCAATAGTGTCAGAGGATTCAACCTCTAAAGTGATGGTCTTACCAGTT 120987 Query 45318 AGAGTTTTTACAAAAATTTGCATC 45341 | || || || |||||||||||| Sbjct 120988 AAGGTCTTAACGAAAATTTGCATC 121011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003070049080