Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq5 251 9e-62 seq3 116 5e-21 >seq5 Length=915096 Score = 251 bits (278), Expect = 9e-62 Identities = 894/1380 (65%), Gaps = 29/1380 (2%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 || || |||| |||||||| || || || ||||||| |||||||||||||| || || Sbjct 38255 TAAATATTGGAAGTGTATGGTTCGAAACATTCATTGTAACCCAAGATTTGGGAAGTAGAA 38314 Query 115963 GCTGTGGGCATGGGTGCCA-TGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTC 116021 || || ||||| || || | | | |||| ||| | | ||| | | || | ||| Sbjct 38315 GCAGTTGGCATTGGAGCAAGTAATAAGGA-GTTTCTTAAACCATTGGTCATGATTCTTTC 38373 Query 116022 CTTGAGGGCGTCCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGG 116079 ||| | | |||||||| || | || ||| || | |||| | ||| || || Sbjct 38374 CTTCAAGTTATCCCAGTCCCATAAATCAG--TTGGCTTCTTACCCCATAAATCGAATTGC 38431 Query 116080 AGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 116139 | |||||||||||| ||||| || || ||||| || ||||| || || | || Sbjct 38432 AAGATACCTTGGGAAGCTGGAGAACCTTCAAAAGTTTCATACTTACCTTCTTCGATGGCT 38491 Query 116140 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATT 116199 |||||| | ||||| | || | || || | || ||||| || || || | Sbjct 38492 AATTCGACGGAGGCCTCTAAAGCACCATGGTAAAGGGTTTCAAAGATTTGAATGTTTAAC 38551 Query 116200 GCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCT 116259 || || || || ||||| | | | || || ||| |||| || | |||| Sbjct 38552 AATTTAGCTTCTGGAGAGTCAAATGGAATTCTCAGTAACATGAATGCATCAGCTAAACCT 38611 Query 116260 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGA 116319 || ||||| ||| |||| || | | |||||| ||||| || ||| || || || || Sbjct 38612 TGAACACCAAGGGCAATAGGTCTGTTTCTCATGTTAGAACGTCTAGCAGTTTCAACTGGG 38671 Query 116320 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 116379 ||| |||| || ||||||| | |||| | || || | ||||||||| | ||| || || Sbjct 38672 TAATAATTTCTGTCGATAATCTTATTCAAGTTCTTAGAGACAACCTTGGCGATCTCGTGT 38731 Query 116380 AGCTTTTC---GTAATCAAAACTGCGAGTCTCTTCA---TTGACATACTTAGGAAGGGCG 116433 | |||||| || | || || |||| ||| | ||| | |||||||| Sbjct 38732 AACTTTTCAAAGTTGTACCAAGTGTTCTTCTCATCAGATTCAACAAAGGCTGGAAGGGCA 38791 Query 116434 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 116493 || || |||| |||||||||| ||| || | | ||| | ||| || | |||||| | Sbjct 38792 ATGGAAGCCAAGTTACACACAGCGGTTTCTTGTTCATCGGAGTATTCAACAATTTCACAA 38851 Query 116494 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 116553 ||||| || || |||||| | |||||||||||||| || || || ||||||| ||| Sbjct 38852 CACAAGTTGGAGGACTTAATCATACCCAAGTTCTTTTGGTTGGATTTCTTGTTACAGGCA 38911 Query 116554 TCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAT 116613 |||||||| | ||| |||| || || ||||| ||||| | | | || | | |||| Sbjct 38912 TCCTTGTATAACATGAATGGGGTACCAGTCTCAGTTTGAGCTTCTAAGATGGAGTACCAT 38971 Query 116614 -ACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTC-CTCGTACTTTGTGTAGA 116671 || | | | || | | ||||| | | | ||| ||| ||||| || || | Sbjct 38972 AACTTTTGAGCCTTG-ATAGTGG-ATCTACCCTTACCTTCTCTTTCGTATCTTTCATACA 39029 Query 116672 GGGCCTCAAACTCTTCACC---CACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGA 116728 | || || || ||||| ||| | || | ||||| || | | ||| ||| Sbjct 39030 ATTCTTCGAATTCATCACCGTAGACATCACCT---AAACCTGGAGCTTCAGATGGGGAGA 39086 Query 116729 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 116788 | | || ||||| |||| ||||| | ||||||||| | ||||||||||| | | Sbjct 39087 ACAAAGTCCATTCACCATTAGATTCAACTCTCTTCATGAATAAATCTGGGATCCATAAGG 39146 Query 116789 CCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 116848 | | ||| | ||| | | | |||||| | || || || | | || | || Sbjct 39147 CTGGGAACAAATCTCTAGCTCTGATTTCTTCCTTACCGTGGTTCTTTCTAATGTCAATAA 39206 Query 116849 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGAC--- 116905 | || | |||||| |||||||| ||||| | ||||| || | | | ||| | | Sbjct 39207 AATCAAAGATATCAGCGTGCCATGGTTCAATGTACAAGGCAAAAG-CACCTGGTCTCTTG 39265 Query 116906 -GACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATA 116964 |||| | || | || || || || || ||| || || | | ||||||||||||| Sbjct 39266 TTACCACCTTGATCAACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATA 39325 Query 116965 CCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATG 117024 || | ||| || || || || || ||| | | ||||||| || ||||||| Sbjct 39326 CCGTTAGAGGTACCGTTAGTACCAGCGATGTAAGAACCGGTAGCTCTGATATTGTGGATG 39385 Query 117025 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAG 117084 || | |||||||| || || ||| || || | || || ||| | | | | |||| Sbjct 39386 TGTAACCCAATACCACCAGCGGTCTTAGAAATCAGAGCACATTCCTTCAAAGTATCGTAA 39445 Query 117085 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTT 117144 ||||| || || |||||| |||| | || | | ||| || ||||||||||| Sbjct 39446 ATCCCTTCAATGGAGTCATCCTTCATGGCAACTAAGAAACAAGAAGACATTTGTGGGTGA 39505 Query 117145 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTT 117203 || |||||||| || || | ||||| | |||||| |||| || || | |||||| Sbjct 39506 GGAGTACCAGCATTAAACAAAGTTGGAGACGCGTGAGTGAA-GTATCTCTCAGACATCAA 39564 Query 117204 ATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCAT 117263 || ||||| || | || || || | || ||||| ||||| || | ||| | ||| Sbjct 39565 ATTATAGGTTTCAATCACCTTTGGGATATTATCACCGTGGATACCAATGGCGACTCTCAT 39624 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 116416 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 116475 ||| || | || ||||| | || || ||||||||||||| || |||||||| | Sbjct 153550 ACAAACATTGGTAGGGCCACAGAGGCAAGATTACACACAGCAGTTTCATCCTTTGAGGAA 153491 Query 116476 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 116535 ||||| | ||||| ||| || || ||| ||| || || ||||| ||||| ||||| Sbjct 153490 TACTCCACTATTTCGCAACATAAGTTAGAAGACTTGATAGTTCCCAAATTCTTCTGATTG 153431 Query 116536 GACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGAC 116595 || || | || || | ||||||||| || | | |||| | || ||||| ||||||| Sbjct 153430 GATTTCTTATTGCATGAATCCTTGTATAGTAGAAATGGGTTACCAGTCTCAGTTTGGGCG 153371 Query 116596 TTGAGAATAGCCTTCCATA 116614 || ||||| | ||||| Sbjct 153370 ACAAGTATAGCATGCCATA 153352 Score = 82.4 bits (90), Expect = 9e-11 Identities = 156/228 (68%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 115563 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT 115622 |||||| || || ||||| | |||| ||| ||||| | |||||| || ||| || Sbjct 154400 GTAGTAAATACCAGTCTTCAAGCCCTTAGACCATGCATAGAAATGCATACTGGTCAATTT 154341 Query 115623 GGAGAGTGTTGGACTTTCC--ATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGT 115680 || | ||||| || || ||| |||| ||||||||||| |||||||| ||||| | Sbjct 154340 TGACATCGTTGG--TTCCCTGATGTAGAGATTCATACTTTGTGATTGATCAATGAATGGA 154283 Query 115681 CCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAG 115740 | | ||| || ||||| ||||| | | ||| | || ||||| || ||| | || Sbjct 154282 GCTCTATCTGCAGCCATCTCAATGATAATCTTTTGCGACATCTCCCAAACTGTTTTATAC 154223 Query 115741 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCA 115788 |||||| ||||| ||| || | | || || ||||| || ||| Sbjct 154222 TTGTTCTTGATATCCAATGGAATGCCAGCTATGTTCTGGATTGACCCA 154175 >seq3 Length=1585198 Score = 116 bits (128), Expect = 5e-21 Identities = 129/172 (75%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 163365 TACGGTCGCGTGGCACCAAGATCTGGTCTCGCTGTGAAGAGCGGTATCCAAGTTGGTGCG 163424 |||||| | || || |||||||||||||| |||||||||| |||||| |||||| Sbjct 969124 TACGGTAGAGTCGCTCCAAGATCTGGTCTTGCTGTGAAGAATGGTATCTCCACTGGTGCC 969183 Query 163425 GGTGTTGTGGATCCAGACTACACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGACAC 163484 ||||| || ||| | || |||| |||||||||||| || ||| | ||||||||| || Sbjct 969184 GGTGTGGTTGATGCCGATTACAGAGGTGAAGTCAAGGTTGTTTTATTCAATCACTCTGAC 969243 Query 163485 ATGGATTTCCAAATCAAAAAGGGGGATCGCATCGCGCAACTCATCTTAGAGA 163536 | ||||||| || || | || ||| | ||||| ||| | | ||||||| Sbjct 969244 AAGGATTTCGCCATTGAACAAGGTGATAGAATCGCACAATTGGTGTTAGAGA 969295 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || ||| | ||| || || | |||||| ||| || ||||| | ||| Sbjct 913654 AGCAAAGTCAGTGTGTAAACCTTCATCTCTACAGATGAATTCGTTAGAGAAAGTTAAACC 913595 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 |||||| | ||| | ||||||||||||||| || | | ||| || |||||||||||||| Sbjct 913594 TGGCATTAAACCTCTCTTCTTCAACCAGAAGATGGAAGCAAAGGAACCAGAGAAGAAGAT 913535 Query 127639 CCCCTCCACACACGCGAACGCAA 127661 ||||| || ||||| |||| Sbjct 913534 ACCCTCAACGGCAGCGAAGGCAA 913512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507023616680