Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016-
03-01] 23 sequences; 12,320,962 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq3 120 5e-22
seq5 100 5e-16
>seq3
Length=1585198
Score = 120 bits (132), Expect = 5e-22
Identities = 552/865 (64%), Gaps = 27/865 (3%)
Strand=Plus/Minus
Query 159648 TCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGT 159707
|||| ||||| ||||| ||||| || ||| ||| || |||||||| |||||||||
Sbjct 913928 TCTTTTCGAAGAAGTTAGTCTTACCAGCCAAGGAGATGTTCTCCATGAAGTCGAATGGGT 913869
Query 159708 TCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767
| | || | || |||| | | ||||| || | | || || || || || ||||
Sbjct 913868 TGGTAACATTGTAAATCTTCTTACAACCGAGGGCAACTAATAATCTATCAGCGACGAATT 913809
Query 159768 CGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCG 159827
| | ||| |||||| |||||||| || || | | | | || || | || || |
Sbjct 913808 CAACGTATTGACACATTAAATCACAGTTCATACCTAATAACTTGACTGGCAAGGCATCGG 913749
Query 159828 ACA-GAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACA---CGTTCG 159883
| | | ||| || ||||| || || |||||||| | |||| | ||| | |||
Sbjct 913748 TGAAGTATCTCTTT-TCAATGTCAACAGCTTCGGTGATGATCTTAGCAACAATGCTTTCA 913690
Query 159884 TACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGT 159943
| | || ||| || | |||| || || |||||||| ||| |
Sbjct 913689 TCTGGAGTGTTATTCAAG-TGAGAG-----AACAATAGACAAGCAAAGTCAGTGTGTAAA 913636
Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGT 160003
|| || || | | ||||||| ||||| || | | | || ||||| | || | |
Sbjct 913635 CCTTCATCTCTACAGATGAATTCGTTAGAGAAAGTTAAACCTGGCATTAAACCTCTCTTC 913576
Query 160004 TTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAAC 160063
|| | ||| || |||| ||||| | ||| || ||||| ||||| ||||| || ||
Sbjct 913575 TTCAACCAGAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCCTCAACGGCAGCGAAG 913516
Query 160064 GCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGG---TCCACCTTTTGGCCCAT 160120
|| || | || ||||| || |||| | |||| || |||| ||| |||||||
Sbjct 913515 GCAACCAATCTTTCACCGAATAAGGCTTCA---TCATCGGAGATCCATCTTAAGGCCCAT 913459
Query 160121 TCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCC 160180
|||||||| | | || || || ||| | || | |||||| || || || |||
Sbjct 913458 TCAGCCTTTTCTCTAATACATGGGATGTGTTCAATGGCGTTGAATAAGTAATCAGCTTCC 913399
Query 160181 TTCACATCCTTGA--TCAGAGT--AGCAATCAGCTTCGAGTACATTTCTGCGTGCACATT 160236
|| |||||| | | || || | |||| || ||||| | || | ||| | ||
Sbjct 913398 TTTGGATCCTTAACGTAAGTGTCGATCAATAAG----GAGTAAGTCTCAGAGTGTATGTT 913343
Query 160237 TTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGT 160296
||| || || || || ||||||| || | || || | ||||| || |
Sbjct 913342 TTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCTGGGATTTGCACTTCAGCAGA 913283
Query 160297 GAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACAC 160356
||| ||| | ||| ||| |||| || | || || | || || ||||| || |||||
Sbjct 913282 GAAGTTTTCAACCAAATTTTCATTGACAATACCATCAGATGCAGCGAAGAAGGCTAACAC 913223
Query 160357 GTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTCACGTCTT 160415
||||||||| | ||| |||| | || | ||| || | ||||| |||| | ||| |
Sbjct 913222 TCTAGAGATGAAGTATCTTTCGTTGTCATTCAATCTGTTGTTCCAGTCGTGT-AAGTCCT 913164
Query 160416 GGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACATGGCCC 160475
|| ||||||| ||||| || |||| || ||| | || | |||||||| ||
Sbjct 913163 TGGATAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTCGGCCTTCTTGTACATTTGCC 913104
Query 160476 AGATGGCGTGCTCTCTGATCGGAAA 160500
|||| |||| | | |||| || ||
Sbjct 913103 AGATCTCGTGATATTTGATTGGGAA 913079
>seq5
Length=915096
Score = 100 bits (110), Expect = 5e-16
Identities = 159/223 (71%), Gaps = 4/223 (2%)
Strand=Plus/Plus
Query 203840 TTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGC-TTCTCAGATAGTACATGCC 203898
|| || || ||||| |||||||| |||| ||| || |||||| |||||||| ||
Sbjct 37868 TTATCAACTGTGAATTGAATGGCAGCGGCGGC-GGCTTGAGTTCTCAAGTAGTACATACC 37926
Query 203899 GGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA-CGTTGG 203957
|||||||| ||||||| ||| ||||| | ||||||||||| || || | || |||||
Sbjct 37927 GGTCTTTAAACCCTTCTTCCAACCGTAGAAGTGCATGGAAGTCAACTTACCCATAGTTGG 37986
Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGG 204017
| | || ||| ||||||| ||| || ||| || | | ||| | | || || |
Sbjct 37987 AG-CTCTCAAGTGGATGTTCATAGATTGAGATTGATCAACGTAAGCACCTCTGTCAGCAG 38045
Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060
||||| || || | ||| || ||||| ||||| || |||||
Sbjct 38046 ACATATCAATGATAGACTTTTGAGAAATTTCCCAAACGGTCTT 38088
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154971392880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |