Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3 120 5e-22 seq5 100 5e-16 >seq3 Length=1585198 Score = 120 bits (132), Expect = 5e-22 Identities = 552/865 (64%), Gaps = 27/865 (3%) Strand=Plus/Minus Query 159648 TCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGT 159707 |||| ||||| ||||| ||||| || ||| ||| || |||||||| ||||||||| Sbjct 913928 TCTTTTCGAAGAAGTTAGTCTTACCAGCCAAGGAGATGTTCTCCATGAAGTCGAATGGGT 913869 Query 159708 TCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767 | | || | || |||| | | ||||| || | | || || || || || |||| Sbjct 913868 TGGTAACATTGTAAATCTTCTTACAACCGAGGGCAACTAATAATCTATCAGCGACGAATT 913809 Query 159768 CGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCG 159827 | | ||| |||||| |||||||| || || | | | | || || | || || | Sbjct 913808 CAACGTATTGACACATTAAATCACAGTTCATACCTAATAACTTGACTGGCAAGGCATCGG 913749 Query 159828 ACA-GAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACA---CGTTCG 159883 | | | ||| || ||||| || || |||||||| | |||| | ||| | ||| Sbjct 913748 TGAAGTATCTCTTT-TCAATGTCAACAGCTTCGGTGATGATCTTAGCAACAATGCTTTCA 913690 Query 159884 TACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGT 159943 | | || ||| || | |||| || || |||||||| ||| | Sbjct 913689 TCTGGAGTGTTATTCAAG-TGAGAG-----AACAATAGACAAGCAAAGTCAGTGTGTAAA 913636 Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGT 160003 || || || | | ||||||| ||||| || | | | || ||||| | || | | Sbjct 913635 CCTTCATCTCTACAGATGAATTCGTTAGAGAAAGTTAAACCTGGCATTAAACCTCTCTTC 913576 Query 160004 TTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAAC 160063 || | ||| || |||| ||||| | ||| || ||||| ||||| ||||| || || Sbjct 913575 TTCAACCAGAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCCTCAACGGCAGCGAAG 913516 Query 160064 GCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGG---TCCACCTTTTGGCCCAT 160120 || || | || ||||| || |||| | |||| || |||| ||| ||||||| Sbjct 913515 GCAACCAATCTTTCACCGAATAAGGCTTCA---TCATCGGAGATCCATCTTAAGGCCCAT 913459 Query 160121 TCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCC 160180 |||||||| | | || || || ||| | || | |||||| || || || ||| Sbjct 913458 TCAGCCTTTTCTCTAATACATGGGATGTGTTCAATGGCGTTGAATAAGTAATCAGCTTCC 913399 Query 160181 TTCACATCCTTGA--TCAGAGT--AGCAATCAGCTTCGAGTACATTTCTGCGTGCACATT 160236 || |||||| | | || || | |||| || ||||| | || | ||| | || Sbjct 913398 TTTGGATCCTTAACGTAAGTGTCGATCAATAAG----GAGTAAGTCTCAGAGTGTATGTT 913343 Query 160237 TTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGT 160296 ||| || || || || ||||||| || | || || | ||||| || | Sbjct 913342 TTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCTGGGATTTGCACTTCAGCAGA 913283 Query 160297 GAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACAC 160356 ||| ||| | ||| ||| |||| || | || || | || || ||||| || ||||| Sbjct 913282 GAAGTTTTCAACCAAATTTTCATTGACAATACCATCAGATGCAGCGAAGAAGGCTAACAC 913223 Query 160357 GTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTCACGTCTT 160415 ||||||||| | ||| |||| | || | ||| || | ||||| |||| | ||| | Sbjct 913222 TCTAGAGATGAAGTATCTTTCGTTGTCATTCAATCTGTTGTTCCAGTCGTGT-AAGTCCT 913164 Query 160416 GGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACATGGCCC 160475 || ||||||| ||||| || |||| || ||| | || | |||||||| || Sbjct 913163 TGGATAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTCGGCCTTCTTGTACATTTGCC 913104 Query 160476 AGATGGCGTGCTCTCTGATCGGAAA 160500 |||| |||| | | |||| || || Sbjct 913103 AGATCTCGTGATATTTGATTGGGAA 913079 >seq5 Length=915096 Score = 100 bits (110), Expect = 5e-16 Identities = 159/223 (71%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 203840 TTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGC-TTCTCAGATAGTACATGCC 203898 || || || ||||| |||||||| |||| ||| || |||||| |||||||| || Sbjct 37868 TTATCAACTGTGAATTGAATGGCAGCGGCGGC-GGCTTGAGTTCTCAAGTAGTACATACC 37926 Query 203899 GGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA-CGTTGG 203957 |||||||| ||||||| ||| ||||| | ||||||||||| || || | || ||||| Sbjct 37927 GGTCTTTAAACCCTTCTTCCAACCGTAGAAGTGCATGGAAGTCAACTTACCCATAGTTGG 37986 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGG 204017 | | || ||| ||||||| ||| || ||| || | | ||| | | || || | Sbjct 37987 AG-CTCTCAAGTGGATGTTCATAGATTGAGATTGATCAACGTAAGCACCTCTGTCAGCAG 38045 Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 ||||| || || | ||| || ||||| ||||| || ||||| Sbjct 38046 ACATATCAATGATAGACTTTTGAGAAATTTCCCAAACGGTCTT 38088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154971392880