Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5 289 4e-73 seq3 84.2 3e-11 >seq5 Length=915096 Score = 289 bits (320), Expect = 4e-73 Identities = 1072/1655 (65%), Gaps = 55/1655 (3%) Strand=Plus/Minus Query 111705 TTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGT 111764 |||| ||||| | ||||| | || || |||||||| || || |||||||| | Sbjct 39546 TTCACTCACGCGTCTCCAACTTTGTTTAATGCTGGTACTCCTCACCCACAAATGTCTTCT 39487 Query 111765 TGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAA 111824 |||||| | |||| | ||||| || || || | || ||||||| ||| | | ||| Sbjct 39486 TGTTTCTTAGTTGCCATGAAGGATGACTCCATTGAAGGGATTTACGATACTTTGAAGGAA 39427 Query 111825 TGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCC 111884 ||||| | || || ||| ||||||||||| ||| | |||||||| || ||||||| Sbjct 39426 TGTGCTCTGATTTCTAAGACCGCTGGTGGTATTGGGTTACACATCCACAATATCAGAGCT 39367 Query 111885 AACAAGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGC 111944 | | ||| || ||||| || ||| || | ||||| ||||||||| | | Sbjct 39366 ACCGGTTCTTACATCGCTGGTACTAACGGTACCTCTAACGGTATCATTCCAATGGTGAGA 39307 Query 111945 GTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAGGGATC------T 111998 || || ||| ||| || | || || | |||| ||| | |||| || | | Sbjct 39306 GTGTTCAACAACACCGCCAGATACGTTGATCAAGGTGG---TAACAAGAGACCAGGTGCT 39250 Query 111999 ATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTC 112058 | || | || |||| ||||||||||| |||||| | || || |||| | | Sbjct 39249 TTTGCCTTGTACATTGAACCATGGCACGCTGATATCTTTGATTTTATTGACATTAGAAAG 39190 Query 112059 AACCAAGGTGATGAGGAGGCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGA 112117 ||||| ||| | || || | | || | ||| | ||| | || | ||||| ||||| Sbjct 39189 AACCACGGTAAGGAAGAAAT-CAGAGCTAGAGATTTGTTCCCAGCCTTATGGATCCCAGA 39131 Query 112118 TCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGC 112177 | | ||||||||||||||||| | ||| | ||| || | || | ||| | || Sbjct 39130 TTTATTCATGAAGAGAGTTGAATCTAATGGTGAATGGACTTTGTTCTCCCCATCTGAAGC 39071 Query 112178 ACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGA 112237 || ||| | |||| | ||||| || || |||| | || || ||||| Sbjct 39070 TCCAGGTTTAGGTGATGTCTACGGTGATGAATTCGAAGAATTGTATGAAAGATACGAAAG 39011 Query 112238 AGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTC 112297 |||| || || | | || | ||| | | ||| | | || | | | Sbjct 39010 AGAAGGTAAGGGTAGATCCACTATCAAGGCTCAAAAGTTATGGTACTCCATCTTAGAAGC 38951 Query 112298 TCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAA 112357 |||||| ||||||||||| |||| ||| | ||||| || ||||||||| | || || Sbjct 38950 TCAAACTGAGACTGGTACCCCATTCATGTTATACAAGGATGCCTGTAACAAGAAATCCAA 38891 Query 112358 TCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTAC 112417 |||||||| |||||| |||| ||| |||||| | ||| ||||| | |||| | Sbjct 38890 CCAAAAGAACTTGGGTATGATTAAGTCCTCCAACTTGTGTTGTGAAATTGTTGAATACTC 38831 Query 112418 AGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA 112477 || || | || || |||||||||||| | || || || || || || | ||| || Sbjct 38830 CGATGAACAAGAAACCGCTGTGTGTAACTTGGCTTCCATTGCCCTTCCAGCCTTTGTTGA 38771 Query 112478 TCCAGA-GACAAAGACATTTG-----ATTATGAAAAACTCCACGAAGTTACGAAAACTGT 112531 | || || || ||| ||| | | |||||| | ||||| | | || ||| Sbjct 38770 ATCTGATGAGAAGAACACTTGGTACAACTTTGAAAAGTTACACGAGATCGCCAAGGTTGT 38711 Query 112532 CACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAA 112591 | | || ||| | || | |||| || ||||||| |||||| ||||| |||||| | Sbjct 38710 CTCTAAGAACTTGAATAAGATTATCGACAGAAATTATTACCCAGTTGAAACTGCTAGACG 38651 Query 112592 ATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT 112651 ||||| |||||| || | || |||| || ||||| |||||| | || |||| |||||| Sbjct 38650 TTCTAACATGAGAAACAGACCTATTGCCCTTGGTGTTCAAGGTTTAGCTGATGCATTCAT 38591 Query 112652 TCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAA---GGAAATCAATGCGCGTATATT 112708 | | ||||||| || ||||| || | || || | | || || Sbjct 38590 GTTACTGAGAATTCCATTTGACTCTCCAGAAGCTAAATTGTTAAACATT---CAAATCTT 38534 Query 112709 TGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCG--GAGTTGGCAGAGGTTGATGGT 112766 ||| || | || || | ||| | ||||| | || || || || | || ||| Sbjct 38533 TGAAACCCTTTACCATGGTGCTTTAGAGGC--CTCCGTCGAATTAGCCATCGAAGAAGGT 38476 Query 112767 CCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGG 112826 |||||||| ||||| |||||||||||||| ||||| | | ||||| ||| | ||| Sbjct 38475 AAGTATGAAACTTTTGAAGGTTCTCCAGCTTCCCAAGGTATCTTGCAATTCGATTTATGG 38416 Query 112827 GAAGGTGAGA--CCAA--GCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGA 112882 ||| ||| |||| | || | | |||||||| | |||||| | |||| | Sbjct 38415 ---GGTAAGAAGCCAACTGATTTA-TGGGACTGGGATAACTTGAAGGAAAGAATCATGAC 38360 Query 112883 GAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAAT 112942 || ||| | | ||| | || | || ||||||||||| || || || | ||||| Sbjct 38359 CAATGGTTTAAGAAACTCCTTATTACTTGCTCCAATGCCAACTGCTTCTACTTCCCAAAT 38300 Query 112943 CTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCC 113001 ||||||| | |||||||| || ||||| ||||| | || || || ||| |||||| | Sbjct 38299 CTTGGGTTACAATGAATGTTTCGAACCATACACTTCCAATATTTACTCT-AGAAGAGTGC 38241 Query 113002 TCGCGGGAGAGTTTGTGATTGTCAACAAGCAT-CTCGTGGA-TGACCTCAAAGAGATTGG 113059 | || || || || ||||| ||| ||| || || || || | || |||| Sbjct 38240 TAGCTGGTGAATTCCAAATTGTTAAC--CCATACTTGTTGAGAGATTTGGTTGACCTTGG 38183 Query 113060 TCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATAT 113119 | ||| | ||||||| | | ||| | | ||||||||||||||| | Sbjct 38182 ATTATGGGATGACTCTATGAAGAACCACATTATTTCTGATAATGGTTCCATTCAAAACTT 38123 Query 113120 TGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAA----TCAAGA 113175 | |||| |||||| | || | ||||| || |||||||||| |||| Sbjct 38122 GCCAAACGTTCCTGATGAATTAAAACAATTGTATAAGACCGTTTGGGAAATTTCTCAA-- 38065 Query 113176 TGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTT-CATTGATCAAAGTCAAAGT 113234 ||| | ||||||| ||| | || || | ||| |||| | |||||||| |||| | Sbjct 38064 --AAGTCTATCATTGATATGTCTGCTGACAGAGGT-GCTTACGTTGATCAATCTCAATCT 38008 Query 113235 ATGAATCTATTCA-TGGAAAG-TCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACA 113292 ||||| || || | || || |||||| ||| ||| | |||| |||||| | ||| Sbjct 38007 ATGAA--CATCCACTTGAGAGCTCCAACTATGGGTAAGTTGACTTCCATGCACTTCTACG 37950 Query 113293 GTTGGAAGAAGGGTCTCAAAACGGGGATGTATTAC 113327 |||||||||||||| | || || || ||||| ||| Sbjct 37949 GTTGGAAGAAGGGTTTAAAGACCGGTATGTACTAC 37915 Score = 84.2 bits (92), Expect = 3e-11 Identities = 150/216 (69%), Gaps = 5/216 (2%) Strand=Plus/Plus Query 112299 CAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAAT 112358 ||||| |||||||||| |||| | | || ||||| || | || || | || ||| Sbjct 153375 CAAACTGAGACTGGTAACCCATTTCTACTATACAAGGATTCATGCAATAAGAAATCCAAT 153434 Query 112359 CAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACA 112418 || ||||||||||| |||||| ||| ||| | ||| ||||| |||| | | | Sbjct 153435 CAGAAGAATTTGGGAACTATCAAGTCTTCTAACTTATGTTGCGAAATAGTGGAGTATTCC 153494 Query 112419 GACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGAT 112478 || ||||| || ||||||||||| || || || | || || || | || ||||||| Sbjct 153495 TCAAAGGATGAAACTGCTGTGTGTAATCTTGCCTCTGTGGCCCTACCAATGTTTGTGGAT 153554 Query 112479 -CCAGAGACAAAGACATTTGATTATGAAAAACTCCA 112513 ||| || |||| |||||||| | || ||| || Sbjct 153555 GCCA---AC-AAGAAATTTGATTTTAAATTACTTCA 153586 >seq3 Length=1585198 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 163556 GTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGCGGGTGTTATT 163615 || || ||| |||||||||| |||||||| | |||||| |||||| ||||| || Sbjct 969133 GTCGCTCCAAGATCTGGTCTTGCTGTGAAGAATGGTATCTCCACTGGTGCCGGTGTGGTT 969192 Query 163616 GATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCA 163659 ||| |||| |||| ||||||||||| || ||| | |||||||| Sbjct 969193 GATGCCGATTACAGAGGTGAAGTCAAGGTTGTTTTATTCAATCA 969236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742221536560