Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq12 114 2e-20 seq11 86.0 8e-12 seq8 86.0 8e-12 >seq12 Length=324105 Score = 114 bits (126), Expect = 2e-20 Identities = 332/501 (66%), Gaps = 29/501 (6%) Strand=Plus/Plus Query 104921 GGTGTTAAAGTATGGAATGATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATTTCAC 104980 ||||| ||| | ||| ||| ||| || || | | | |||||| |||| ||||| || Sbjct 266660 GGTGTGAAAATTTGGGATGGTAACGGATCTAGAGAATATTTAGACTCTTTAGGATTA-AC 266718 Query 104981 TTTC-GAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGC 105039 | ||| |||||| |||||||| ||| |||||||||| ||||||||||| ||| || Sbjct 266719 TGAAAGAAGAGAAGGCGATTTAGGTCCAGTTTATGGATTCCAATGGAGACACTTTGGTGC 266778 Query 105040 TCAATATATCGACTGTGATACCGACTATACCGGCCA-AGGTATAGACCAATTAAGTCAAG 105098 | |||| || |||||| | || || | || | ||||| || |||||| | || Sbjct 266779 AGAGTATACAGATTGTGATGCTGATTACTCTGGTAAGGGGTAT-GATCAATTAGCTAAAA 266837 Query 105099 TTATAGAAACTATAAAAAATAACCCCGGGTGTCGAAGAATAATTATAGATAGTTGGAATG 105158 |||| || ||| | |||||||| || | ||||||| ||| || | |||||| Sbjct 266838 TTATTGATACTTTGAAAAATAATCCATACGATAGAAGAATTATTTTATCTGCATGGAATC 266897 Query 105159 TGTCACAATTATCAGATATGGCTCTTCCACCGTGTCAT-TGTTTGGTACAATTTTACATT 105217 | ||| || ||||| | ||||| |||||| ||||| || ||||| | || Sbjct 266898 CACCTGCATTCAAGGAAATGGCATTACCACCATGTCATGTGTTTTGT-CAATTCT--ATG 266954 Query 105218 AGAAAT----AAAA--------TTTATTTAGAT-----TGTCAATTGTATCAAAGATCTG 105260 ||| | |||| | | |||| |||||| |||||||||||||| Sbjct 266955 TGAACTTCCCAAAAGATGGAGGTAAACCAAGATTATCATGTCAAATGTATCAAAGATCTT 267014 Query 105261 CAGATTTAGGATTAGGTGTACCATATAATATTGGTTTCTATTCATTTTTG--GTGTGTGT 105318 ||| | ||||||||||| || | ||||||| | |||||||| ||| | || Sbjct 267015 GTGATATGGGATTAGGTGTGCCTTTCAATATTGCATCTTATTCATTATTGACTTACATGA 267074 Query 105319 TCTCTCAAAATGGTGTAATCTAACCCCCGGAAAATTTATTCATACTTTTGGAGATGTTCA 105378 | |||| | || | || || || || |||| ||||| ||| | || ||| ||| Sbjct 267075 TTGCTCACATTGTGGATATGGAA--CCAGGTGAATTCATTCACACTATGGGTGATTCTCA 267132 Query 105379 TGTATATTCTAACCATGTTGA 105399 ||| || | | | || ||||| Sbjct 267133 TGTGTACTGTGATCACGTTGA 267153 >seq11 Length=430679 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 182996 TACAATGCAGATTTTGATGGAGATGAAATGAATTTACATGTTCCTCAGTCGTATGAAGCT 183055 || || |||||||| ||||| ||||||||||||||||| |||||||| || |||||| || Sbjct 153487 TATAACGCAGATTTCGATGGTGATGAAATGAATTTACACGTTCCTCAATCTTATGAAACT 153428 Query 183056 ACCGCTGAATTA 183067 | ||||||||| Sbjct 153427 AGAGCTGAATTA 153416 >seq8 Length=743908 Score = 86.0 bits (94), Expect = 8e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 182994 CTTACAATGCAGATTTTGATGGAGATGAAATGAATTTACATGTTCCTCAGTCGTATGAAG 183053 |||| ||||| ||||||||||| ||||||||||||||||||||||||||| | | |||| Sbjct 714662 CTTATAATGCTGATTTTGATGGTGATGAAATGAATTTACATGTTCCTCAGACTGAAGAAG 714721 Query 183054 CTACCGCTGA 183063 ||| ||||| Sbjct 714722 CTAGAGCTGA 714731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658403010709080