Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq3 313 3e-80 seq5 280 2e-70 >seq3 Length=1585198 Score = 313 bits (346), Expect = 3e-80 Identities = 636/920 (69%), Gaps = 27/920 (3%) Strand=Plus/Minus Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 ||||| || |||| |||||| ||||| ||||| ||||| || || | || || || Sbjct 913947 TTTTGGTAATCGGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCAGCCAAGGAGATGTTC 913888 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 ||||| || || ||||| || | ||||| || || || || | || | | | || | Sbjct 913887 TCCATGAAGTCGAATGGGTTGGTAACATTGTAAATCTTCTTACAACCGAGGGCAACTAAT 913828 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 | |||||| || || |||| || ||| ||| | |||||| ||||| |||| ||| Sbjct 913827 AATCTATCAGCGACGAATTCAACGTATTGACACATTAAATCACAGTTCATACCTAATAAC 913768 Query 18850 TTAACAGGTAGTGCATCTGT-AAGAAATTCTTGTTCTATATTTACTGCCTC--TGAT-AT 18905 || || || | ||||| || ||| | |||| ||| || | || || || |||| || Sbjct 913767 TTGACTGGCAAGGCATCGGTGAAGTATCTCTT-TTCAATGTCAACAGCTTCGGTGATGAT 913709 Query 18906 AATAGATACAACTCTATCTTCATTAGGAGGGT-ATAGAAGATGTTTAAACATCAAACATG 18964 ||| |||| || ||||| |||| || || ||| || |||| | ||| | Sbjct 913708 CTTAGCAACAATGCT---TTCATCTGGAGTGTTATTCAAG-TGAGAGAACAATAGACAAG 913653 Query 18965 CAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAG 19024 |||| ||| |||| || || ||||||| || ||||| ||||| || |||||||| | Sbjct 913652 CAAAGTCAGTGTGTAAACCTTCATCTCTACAGATGAATTCGTTAGAGAAAGTTAAACCTG 913593 Query 19025 GCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATAC 19084 |||| | ||||| || || |||||||| || |||||||| || ||||| ||||| |||| Sbjct 913592 GCATTAAACCTCTCTTCTTCAACCAGAAGATGGAAGCAAAGGAACCAGAGAAGAAGATAC 913533 Query 19085 CTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCC--ATAACTAGCATCATTATTATGAAT 19142 | || || || || || ||||| | |||||| || |||| || |||| || || Sbjct 913532 CCTCAACGGCAGCGAAGGCAACCAATCTTTCACCGAATAAG--GCTTCATCATCGGAGAT 913475 Query 19143 CCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCAT-TGTCTCTATAGAATTAA 19201 |||| | | ||||| |||||||| | | | | |||||| || ||| || || | || | Sbjct 913474 CCATCTTAAGGCCCATTCAGCCTTTTCTCTAATACATGGGATGTGT-TCAATGGCGTTGA 913416 Query 19202 ATAGATACATACGCT-CATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATT 19260 ||| || || ||| | | || ||| ||||| || | || |||||||| ||| | Sbjct 913415 ATAAGTA-ATCAGCTTCCTTTGGATCCTTAACGTAAGTGTCGATCAATAAGGAGTAAGTC 913357 Query 19261 TCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATC 19320 || || || || ||||| || || || || ||||| |||||| | ||||||| || Sbjct 913356 TCAGAGTGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCTGGGATT 913297 Query 19321 TGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCA 19380 || |||||| | | || |||| |||||||||||||| || || |||||| || || Sbjct 913296 TGCACTTCAGCAGAGAAGTTTTCAACCAAATTTTCATTGACAATACCATCAGATGCAGCG 913237 Query 19381 AAAAATGCTAATACATGTTTA-ATAAAATGTTTTTCATCTGAGGTT-AAT---GTATTCC 19435 || || ||||| || | | | || || | | |||| | || || ||| | |||| Sbjct 913236 AAGAAGGCTAACAC-TCTAGAGATGAAGTATCTTTCGT-TGTCATTCAATCTGTTGTTCC 913179 Query 19436 AATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTT 19495 | || | | || || |||||||| | |||||| | ||||| || ||||| || || | Sbjct 913178 AGTCGTGTAAGTCCTTGGATAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTCGGCCT 913119 Query 19496 TTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTAT 19555 | || ||||| | ||| || || |||||| || || |||| || ||||| || || | Sbjct 913118 TCTTGTACATTTGCCAGATCTCGTGATATTTGATTGGGAATAAGACGAATCTCTTCTTGT 913059 Query 19556 TTTC-TTTAAGAATAGGTTC 19574 |||| |||| || |||||| Sbjct 913058 TTTCAGTTAATAA-AGGTTC 913040 >seq5 Length=915096 Score = 280 bits (310), Expect = 2e-70 Identities = 560/824 (68%), Gaps = 12/824 (1%) Strand=Plus/Plus Query 47991 TTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATG 48050 |||||||| || |||||||| | ||| || || || ||||| || | |||| ||| | | Sbjct 38900 TTGTTACAGGCATCCTTGTATAACATGAATGGGGTACCAGTCTCAGTTTGAGCTTCTAAG 38959 Query 48051 ATAGATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTAT 48110 || || | ||| | | |||||| ||| | |||| | ||| || ||||||| Sbjct 38960 ATGGAGTACCATAACTTTTGAGCCTTGATAGTGGATCTACCCTTACCTTCTCTTTCGTAT 39019 Query 48111 TTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTA 48170 | ||| || | || |||||||| || || |||| | |||| || ||| |||| Sbjct 39020 CTTTCATACAATTCTTCGAATTCATCACCGTAGACATCACCTAAACCTGGAGCTTCAGAT 39079 Query 48171 GGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATC 48230 || | | ||| | ||| || ||| | || ||||| |||| |||| |||||| ||| Sbjct 39080 GGGGAGAACAAAGTCCATTCACCATTAGATTCAACTCTCTTCATGAATAAATCTGGGATC 39139 Query 48231 CAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGT 48290 || | ||| || ||||| |||| ||| | |||||| || || ||| || ||| Sbjct 39140 CATAAGGCTGGGAACAAATCTCTAGCTCTGATTTCTTCCTTACCGTGGTTCTTTCTAATG 39199 Query 48291 TCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGT 48350 |||| ||| || | |||||||| ||||||||||| | || | || | |||||||| Sbjct 39200 TCAATAAAATCAAAGATATCAGCGTGCCATGGTTCAATGTACAAGGCAAAAGCACCTGGT 39259 Query 48351 CGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGG 48410 | || ||||| |||||||| | |||||||| || ||||| | ||||| | |||||| Sbjct 39260 CTCTTGTTACCACCTTGATCAACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGA 39319 Query 48411 ACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTA 48470 | ||||| || || |||| || || || | || ||| || ||||||| ||||| Sbjct 39320 ATGATACCGTTAGAGGTACCGTTAGTACCAGCGATGTAAGAACCGGTAGCTCTGATATTG 39379 Query 48471 CTAAT-TGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGT 48529 || || || || |||||||| || | ||||| || |||||||| || | || Sbjct 39380 TGGATGTGTAA-CCCAATACCACCAGCGGTCTTAGAAATCAGAGCACATTCCTTCAAAGT 39438 Query 48530 ATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTG 48589 ||| ||||| ||||| || ||||| |||| | || |||||| ||||||||| Sbjct 39439 ATCGTAAATCCCTTCAATGGAGTCATCCTTCATGGCAACTAAGAAACAAGAAGACATTTG 39498 Query 48590 CGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGA 48649 || ||| ||| || | |||||| || |||||||| || ||| | || || |||| || Sbjct 39499 TGGGTGAGGAGTACCAGCATTAAACAAAGTTGGAGACGCGTGAGTGAAGTATCTCTCAGA 39558 Query 48650 TAACAATTTATATGTTTCAATAAC----AGAATCTATATCCCATTGATGTATACCTATAG 48705 | ||| ||||| |||||||| || | || | |||| | || ||||| || | Sbjct 39559 CATCAAATTATAGGTTTCAATCACCTTTGGGATAT-TATCAC---CGTGGATACCAATGG 39614 Query 48706 ATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGAT 48765 || | ||| | || ||||||||| || ||| || | ||| | || | | Sbjct 39615 CGACTCTCATGGTTAAATGTTGAGGTCTCTCGGCAACCTTACCGTCGATTCTTAATAAGT 39674 Query 48766 ATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTA--TGAAA 48807 | ||| ||||||| || ||||| || ||||| || || ||||| Sbjct 39675 AAGATCTTTCCAAGGTCTTAAACCCGAAATAATTATAACTGAAA 39718 Score = 152 bits (168), Expect = 6e-32 Identities = 915/1464 (63%), Gaps = 50/1464 (3%) Strand=Plus/Minus Query 47013 GTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTA 47072 |||| || || || ||||||||||| || || | |||| |||||||||||||||| Sbjct 154408 GTTCTCAAGTAGTAAATACCAGTCTTCAAGCCCTTAGACCATGCATAGAAATGCATACTG 154349 Query 47073 GTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATA 47132 || ||||| || | ||||| || | | ||| | | ||| |||||||| Sbjct 154348 GTCAATTTTGACATCGTTGGTTCCCTGATGTAGAGATTCATACTTTGTGATTGATCAATG 154289 Query 47133 AATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTT 47192 |||| | ||||||| || ||||| || | |||| | |||| | |||||||| |||||| Sbjct 154288 AATGGAGCTCTATCTGCAGCCATCTCAATGATAATCTTTTGCGACATCTCCCAAACTGTT 154229 Query 47193 TTATAAATTTGTTTAATGTCTTCTGGGAGATTAG---TATTTTGAATAGATCCTCCgtt- 47248 ||||| | | || || || ||| | || | || || || || || | || Sbjct 154228 TTATACTTGTTCTTGATATCCAATGGAATGCCAGCTATGTTCTGGATTGACCCATCATTG 154169 Query 47249 --ttctat--aattttgttttttaattcatttgaccaa--agttttcgttcagttaatgt 47302 | | || |||||| |||| ||||| || || || | | | | ||| Sbjct 154168 AATACAATCAAATTTTTGATTTT--TTCATCCCACAAACCAG----CATCAACTAAATCA 154115 Query 47303 ttttaaAAG-ATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATA 47361 | ||| || | || |||||||| ||||| ||||| | |||||| | ||| | Sbjct 154114 TCAATCAAGTATTTG--TTGACAATTTGGAATTCACCAGACAATACTCTTCTAGAATACA 154057 Query 47362 TATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTG 47421 ||||| || ||||| | | ||||| | ||||| ||| || | ||| ||||| | Sbjct 154056 TATTAGAAGTGATCGGTTCAAAACATTCAGTGAATCCAAGAATCTGTGAAGTAGATGCAG 153997 Query 47422 TAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNN 47481 | ||||| | || ||||| || ||||| | || || | | | | Sbjct 153996 TGGGCATCAAAGCTACTAACAATGAGTTTCTGATACCGTACCTG-GCAACACCAGCCTTC 153938 Query 47482 NNNGTTTCC-AATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATT 47540 | ||| ||||||| || | | || |||||||| |||||| || || | Sbjct 153937 AATTTATCCCAATCCCATAGTTTAGTAGGCTTGCAATTCCAAAGATCATACTGGAGTAGG 153878 Query 47541 CCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCA 47600 || | | || ||||| | ||||| || ||| | ||| | |||||| |||||| Sbjct 153877 CCCTGCGATGCTGGTGAACCCTGATATGATTCATATGAACCCTTCTTTTTAGCCAGTTCA 153818 Query 47601 CAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTT 47660 | ||| || ||| || ||| || ||||||||||||| | | |||| | ||| Sbjct 153817 ATAGATGCAGTCAGTGCTGCATGATAGATAGTTTCAAATATTTGTGTATTTAACTGTCTT 153758 Query 47661 G--CTTCTGATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAA 47718 | ||| | || | |||| | ||| || || |||||||| ||||||| Sbjct 153757 GAGCTT-TCATCAC-CAAAGGTATATCCCATCTTGAAGAAGGTGTCTGCCAAACCTTGAA 153700 Query 47719 CACCAATACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATT 47778 |||||| | | || || | | |||||||| ||| || || | ||||||| Sbjct 153699 CACCAACGGCGACCGGCCTGTTTCTCATATTAGAAGTCTCGGCCTCCTTTGTTGGATATG 153640 Query 47779 TGTTTATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATT 47838 | ||| || | |||| ||| ||| || | || | Sbjct 153639 ATCCAACATCAATCACCTTATCGAGATTCTTGATGACTATTTGAGTTATT-CTATGAAGT 153581 Query 47839 TATT-AAAATCAAACTTGTTATTTATA---ACAAACCTATTAAGTGCTATAGATGCTAGA 47894 ||| ||||||||| || || || | |||||| | || || | ||| || ||| Sbjct 153580 AATTTAAAATCAAATTTCTTGTTGGCATCCACAAACATTGGTAGGGCCACAGAGGCAAGA 153521 Query 47895 TTACATACAGCTACCTCAT--TTGGATTAGTATATTGTATTATTTCAGCACATAGATTAC 47952 ||||| ||||| |||| || || | ||| | | |||||| ||||| ||| Sbjct 153520 TTACACACAGCAGTTTCATCCTTTGAGGA--ATACTCCACTATTTCGCAACATAAGTTAG 153463 Query 47953 CACATTTGATAGTACCCAAATTTTGATGATT--ATTNNNNTTGTTACATGCGTCCTTGTA 48010 | | |||||||| |||||||| | ||||| ||| || || |||| |||||||| Sbjct 153462 AAGACTTGATAGTTCCCAAATTCTTCTGATTGGATTTC--TTATTGCATGAATCCTTGTA 153405 Query 48011 AAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAAC------ 48064 || | ||| || | ||||| || | || | ||| |||| | ||| | Sbjct 153404 TAGTAGAAATGGGTTACCAGTCTCAGTTTGGGCGACAAGTATAGCATGCCATAATTTTTG 153345 Query 48065 AGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTT 48124 || || ||||| | | | || ||| || |||| ||||| ||||| Sbjct 153344 AGCTTTAACCTTTTTGATGAATTTACCTT------CACGTTCATATTTCTCATATAGAGC 153291 Query 48125 CTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGA 48184 | |||| || || ||||| |||| | | |||||||| | || | | | ||| | Sbjct 153290 CACAAACTCCTCACCATAAACATCAGTGAGTCCAGGACACTTATCTTGGGAAAACAAACA 153231 Query 48185 CCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAA 48244 |||||| ||| | | ||| | |||||| | ||| || ||||| | || ||| Sbjct 153230 CCAATCTTCACCCCGCTGAACTTTTTCCATAAACAAATCAGGAATCCATAATGCATAAAA 153171 Query 48245 TAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCAT 48304 ||||| |||| ||| | ||| || || ||| ||| | | || || | || || | Sbjct 153170 CAAATCTCTAGCTCTAACTTCCTCCTTACCATGGTTCTTCCTCAGGTCTAAGAATTCAAA 153111 Query 48305 TATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCC 48364 |||||| ||||||| |||||||||||||| | |||| |||| |||||||| || Sbjct 153110 AATATCACCATGCCAGGGTTCTAAATATATACAAAAGGCACCCGGTCTCTTATTACCACC 153051 Query 48365 TTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGA 48424 ||||| | ||| |||||||| | | ||||| | ||||| || || | ||| |||| Sbjct 153050 CTGATCGACATACTTGGCAGTACTATCGAAAACTTTCAACATGGGCACCAGTCCACTTGA 152991 Query 48425 TATACCATTGGTTCCCGAAATATA 48448 |||||||||| || | ||||| Sbjct 152990 AGTACCATTGGTACCTGCGATATA 152967 Score = 111 bits (122), Expect = 2e-19 Identities = 305/459 (66%), Gaps = 19/459 (4%) Strand=Plus/Plus Query 47013 GTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTA 47072 |||| || || |||||||| ||||||||||| |||| || ||||| ||||| | Sbjct 37907 GTTCTCAAGTAGTACATACCGGTCTTTAAACCCTTCTTCCAACCGTAGAAGTGCATGGAA 37966 Query 47073 GTTAATTTAGA-ATAACTAG-GTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAA 47130 || || ||| ||| | | | ||| || | | || || | ||||||| ||||||| Sbjct 37967 GTCAACTTACCCATAGTTGGAGCTCTCAAGT--GGATGTTCATAGATTGAGATTGATCAA 38024 Query 47131 TAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTG 47190 | |||||||| ||||| | |||||| | ||| | |||| | || ||||| || | Sbjct 38025 CGTAAGCACCTCTGTCAGCAGACATATCAATGATAGACTTTTGAGAAATTTCCCAAACGG 38084 Query 47191 TTTTATAAATTTGTTTAATGTCTTCTGGGA-GATTAGTA--TTTTGAATAGATCCTCCgt 47247 | ||||| | |||||| | || || || | | || | | |||||||| || || | Sbjct 38085 TCTTATACAATTGTTTTAATTCATCAGGAACGTTTGGCAAGTTTTGAATGGAACCA---T 38141 Query 47248 tttct---ataattttgtttttta---attcatttgaccaaagttttcgttcagttaatg 47301 | || ||||| | ||| || | | |||| ||| | | | ||| || Sbjct 38142 TATCAGAAATAATGTGGTTCTTCATAGAGTCATC---CCATAATCCAAGGTCAACCAAAT 38198 Query 47302 tttttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATA 47361 | | || | | || ||||||||||| ||||| |||| ||| ||||| | || | Sbjct 38199 CTCTCAACAAGTATGGGTTAACAATTTGGAATTCACCAGCTAGCACTCTTCTAGAGTAAA 38258 Query 47362 TATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTG 47421 |||| || |||||||| | | ||||||| | || || ||||| | ||| || || | Sbjct 38259 TATTGGAAGTGTATGGTTCGAAACATTCATTGTAACCCAAGATTTGGGAAGTAGAAGCAG 38318 Query 47422 TAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCAT 47460 | ||||| | |||| ||||||| ||||||| |||| Sbjct 38319 TTGGCATTGGAGCAAGTAATAAGGAGTTTCTTAAACCAT 38357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108638393720