Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq14 149 5e-31 seq3 132 4e-26 seq5 111 1e-19 >seq14 Length=138463 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | |||||| || || | ||| ||||| ||||| || |||||||| | Sbjct 120784 CCACCTCTCAATCTTAAAACCAAGTGCAAGGTTGATTCCTTTTGAATGTTGTAATCAGAT 120843 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| || ||||||||||| ||||| || || | |||||||| || || Sbjct 120844 AAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGG 120903 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| ||||||||||| || || ||| | || | ||||||||| | ||| || Sbjct 120904 ATACCTTCCTTATCTTGAATCTTAGACTTGACATTGTCAATAGTGTCAGAGGATTCAACC 120963 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||||| || || || ||||| || || || || || ||||| Sbjct 120964 TCTAAAGTGATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCAT 121010 >seq3 Length=1585198 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | ||| || || || | || ||||| ||||| || |||||||||| Sbjct 1231560 CCACCTCTCAATCTTAAGACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAATCGGAC 1231501 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | || || ||||||||||| || || ||||| | |||||||| || || Sbjct 1231500 AAGGTTCTACCGTCTTCTAATTGCTTACCGGCGAAGATCAATCTTTGTTGATCAGGTGGG 1231441 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || || || ||| | || | ||||||||| | ||| || Sbjct 1231440 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAGGATTCGACC 1231381 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || | ||||| || || || ||||| || || ||||| || |||||| Sbjct 1231380 TCTAAAGTGATGGTCTTACCTGTTAAGGTCTTAACAAAAATTTGCATG 1231333 >seq5 Length=915096 Score = 111 bits (122), Expect = 1e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | || || || || | ||| ||||| ||||| || ||||| |||| Sbjct 587566 CCACCTCTTAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAA 587625 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| || ||||||||||| ||||| || || | |||||||| || || Sbjct 587626 AGAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGGG 587685 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCAC 101421 || ||||| || ||||| ||||| ||| ||| | || | || ||||| | ||| || Sbjct 587686 ATACCTTCCTTGTCTTGGATTTTAGATTTGACATTGTCAATGGTATCAGAGGATTCAAC 587744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396278288918211