Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq5 197 7e-46 >seq5 Length=915096 Score = 197 bits (218), Expect = 7e-46 Identities = 348/501 (69%), Gaps = 12/501 (2%) Strand=Plus/Plus Query 25896 AGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACA 25955 |||| ||| ||| ||| |||| |||||| ||| ||| ||||||||||| ||||| | Sbjct 39084 AGAACAAAGTCCATTCACCATTAGATTCAACTCTCTTCATGAATAAATCTGGGATCCATA 39143 Query 25956 TTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTA 26015 || || |||||||| ||||| |||||||| || ||||| |||||| | | || | Sbjct 39144 AGGCTGGGAACAAATCTCTAGCTCTGATTTCTTCCTTACCGTGGTTCTTTCTAATGTCAA 39203 Query 26016 AGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTT 26075 |||||||| ||||| | |||||||||||| | || | |||||| |||| ||| | Sbjct 39204 TAAAATCAAAGATATCAGCGTGCCATGGTTCAATGTACAAGGCAAAAGCACCTGGTCTCT 39263 Query 26076 TTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTA 26135 | ||||||||||| |||||||| || || | ||||| ||| ||| |||||||| | Sbjct 39264 TGTTACCACCTTGATCAACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAA-TG 39322 Query 26136 ATCCAGTT-GAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGA 26194 || | ||| || ||||| || | | || | || || || | ||| |||| ||| Sbjct 39323 ATACCGTTAGAGGTACCGTTAGTACCAGCGATGTAAGAACCGGTAGCTCTGATATTGTGG 39382 Query 26195 GCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC--TGAAACTGTAT 26252 || | || || |||||||| || ||||| ||||| || | ||| |||| Sbjct 39383 ATGTGTAACCCAATACCACCAGCGGTCTTAGAAATCAGAGCACATTCCTTCAAA--GTAT 39440 Query 26253 CGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCG 26312 || |||| |||| ||| ||| | ||||| | | ||| ||||||||||| | ||| | Sbjct 39441 CGTAAATCCCTTCAATGGAGTCATCCTTCATGGCAACTAAGAAACAAGAAGACATTTGTG 39500 Query 26313 AATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTCA---C 26369 |||| || || | |||||| || || || | || ||||| | |||| ||| Sbjct 39501 GGTGAGGAGTACCAGCATTAAACAAAGTTGGAGACGCGTGAGTGAAGTATCTCTCAGACA 39560 Query 26370 TCAAAGCTGTATAAGTTTCAA 26390 ||||| |||| ||||||| Sbjct 39561 TCAAA---TTATAGGTTTCAA 39578 Score = 179 bits (198), Expect = 2e-40 Identities = 283/403 (70%), Gaps = 12/403 (3%) Strand=Plus/Minus Query 25920 GCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTC 25979 ||| |||||| |||||||| ||||| |||||||| | ||||||||| |||||||| |||| Sbjct 153216 GCTGAACTTTTTCCATAAACAAATCAGGAATCCATAATGCATAAAACAAATCTCTAGCTC 153157 Query 25980 TCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCC 26039 | | ||| || || || || ||||| | || |||||||| ||||||||||| |||| Sbjct 153156 TAACTTCCTCCTTACCATGGTTCTTCCTCAGGTCTAAGAATTCAAAAATATCACCATGCC 153097 Query 26040 ATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATC 26099 | ||||||||||| ||| ||| ||| ||| || ||||| ||||| || || Sbjct 153096 AGGGTTCTAAATATATACAAAAGGCACCCGGTCTCTTATTACCACCCTGATCGACATACT 153037 Query 26100 TTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGC 26159 | ||||| || ||||||||||||||| || || | |||| ||||| || || || | Sbjct 153036 TGGCAGTACTATCGAAAACTTTCAACATGGGCACCAGTCCACTTGAAGTACCATTGGTAC 152977 Query 26160 TATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCC 26219 || | |||||||| || | |||| | |||| | || | |||||||| | Sbjct 152976 CTGCGATATATGATCCTGTAGAACGGATATTGGATACATGCAAGCCAACACCACCAGCAC 152917 Query 26220 ATTTTGA---AATAGCTGCACAATCTG--AAACTGTATCGAAAATTCCTTTTATGCTATC 26274 ||| || ||||||| | || ||||| | ||||||||| | ||| || Sbjct 152916 CTTTGGATATCATAGCTG-----TTTGGTGGACTGTCTTGAAAATTCCGTCGATGGAGTC 152862 Query 26275 ACCTTTCATTCCTAATAAAAAACAAGAAGATAA--TTGCGAAT 26315 | ||| |||| ||| | ||||| || ||||| ||| |||| Sbjct 152861 ATCTTGCATTGCTACCAGGAAACATGATGATAAGCTTGGGAAT 152819 Score = 96.9 bits (106), Expect = 2e-15 Identities = 137/191 (72%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 24991 AATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTT--ATTGATAAG 25048 |||||||| ||| || | || ||||| |||||||| |||||||| || ||| Sbjct 154112 AATCAAGTATTTGTTGACAATTTGGAATTCACCAGACAATACTCTTCTAGAATACATA-- 154055 Query 25049 TTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTT 25108 || ||||||| ||||||||||||||| | ||| | || || ||||||||||| || Sbjct 154054 TTAGAAGTGATCGGTTCAAAACATTCAGTGAATCCAAGAATCTGTGAAGTAGATGCAGTG 153995 Query 25109 GGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAAT 25168 ||||| || |||| ||| | || ||||| | ||| || | ||| | || ||| Sbjct 153994 GGCATCAAAGCTACTAACAATGAGTTTCTGATACCGTACCTGGCAACACCAGCCTTCAAT 153935 Query 25169 TTATCCCAATC 25179 ||||||||||| Sbjct 153934 TTATCCCAATC 153924 Score = 95.1 bits (104), Expect = 6e-15 Identities = 263/401 (66%), Gaps = 12/401 (3%) Strand=Plus/Plus Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075 ||||| |||| | |||||||| | | || |||||| ||||||| ||||||||| Sbjct 38228 AATTCACCAGCTAGCACTCTTCTAGAGTAAATATTGGAAGTGTATGGTTCGAAACATTCA 38287 Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135 || | || |||||||| |||||||| || ||||||||| || | ||||| || ||| Sbjct 38288 TTGTAACCCAAGATTTGGGAAGTAGAAGCAGTTGGCATTGGAGCAAGTAATAAGGAGTTT 38347 Query 25136 CTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC---TAAATTATTATCT 25192 || ||||||| | | || || || || |||||||| || ||||| | | | Sbjct 38348 CTTAAACCATTGGTCATGATTCTTTCCTTCAAGTTATCCCAGTCCCATAAATCAGT---T 38404 Query 25193 AACTCGATATCGTTATCATATAAATCAAATTGTAACAATCCACTTGCTGCAGGCGATTGA 25252 || || ||| | ||||||| ||||| || | || | || || || Sbjct 38405 GGCT-----TC-TTACCCCATAAATCGAATTGCAAGATACCTTGGGAAGCTGGAGAACCT 38458 Query 25253 TCAAAAGTTGAATATTTACCTTTTGTTATTGCCATATCTTTTGATTGCTCTAACGCAGCA 25312 ||||||||| ||| ||||||| | || || | || || |||||| ||| || Sbjct 38459 TCAAAAGTTTCATACTTACCTTCTTCGATGGCTAATTCGACGGAGGCCTCTAAAGCACCA 38518 Query 25313 TAATACATATTTTCAAAAATCGCTTTGTTTAAAAACTTAGCTTTTTCTCCATCGAAAGCA 25372 | || | ||||||| || ||||||| || ||||||| | || || | | Sbjct 38519 TGGTAAAGGGTTTCAAAGATTTGAATGTTTAACAATTTAGCTTCTGGAGAGTCAAATGGA 38578 Query 25373 ATTTCCATTAAGGCGAACGTATCTGCTAATCCCTGAACTCC 25413 ||| || ||| ||| | ||| ||||| || ||||| || Sbjct 38579 ATTCTCAGTAACATGAATGCATCAGCTAAACCTTGAACACC 38619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039929069725