Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq5 279 6e-70 seq3 104 3e-17 >seq5 Length=915096 Score = 279 bits (308), Expect = 6e-70 Identities = 881/1346 (65%), Gaps = 37/1346 (3%) Strand=Plus/Minus Query 75305 TTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGT 75364 |||| |||||| | ||||| | || ||||||||||| || || || ||||| | Sbjct 39546 TTCACTCACGCGTCTCCAACTTTGTTTAATGCTGGTACTCCTCACCCACAAATGTCTTCT 39487 Query 75365 TGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAG 75424 || ||| | | |||| ||||| ||||| || | || || || | ||| | | ||| Sbjct 39486 TGTTTCTTAGTTGCCATGAAGGATGACTCCATTGAAGGGATTTACGATACTTTGAAGGAA 39427 Query 75425 TGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCC 75484 ||||| | || || ||| ||||| ||||||||| | |||||||| || | ||||| Sbjct 39426 TGTGCTCTGATTTCTAAGACCGCTGGTGGTATTGGGTTACACATCCACAATATCAGAGCT 39367 Query 75485 AATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGC 75544 | ||| || || || || ||| || | ||||| ||||||||| | | Sbjct 39366 ACCGGTTCTTACATCGCTGGTACTAACGGTACCTCTAACGGTATCATTCCAATGGTGAGA 39307 Query 75545 GTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGTCGCAAGGG-----GTCCA 75599 || || ||| ||| || | || || |||||| || | |||| | || | Sbjct 39306 GTGTTCAACAACACCGCCAGATACGTTGATCAAGGTGG---TAACAAGAGACCAGGTGCT 39250 Query 75600 TC-GCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTC 75658 | || | ||| | ||||||||||| || |||||| | || || |||| | || Sbjct 39249 TTTGCCTTGTACATTGAACCATGGCACGCTGATATCTTTGATTTTATTGACATTAGAAAG 39190 Query 75659 AACCAAGGTGACGAAGAGGCTCGGTG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGA 75717 ||||| ||| | ||||| || | | ||||||| | || || || | ||||| ||||| Sbjct 39189 AACCACGGTAAGGAAGAAA-TCAGAGCTAGAGATTTGTTCCCAGCCTTATGGATCCCAGA 39131 Query 75718 CCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGC 75777 | ||||||||| | ||||| |||| ||||| || | |||| ||| | || Sbjct 39130 TTTATTCATGAAGAGAGTTGAATCTAATGGTGAATGGACTTTGTTCTCCCCATCTGAAGC 39071 Query 75778 ACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAA-G 75836 |||||| | || | ||||| || || |||| | || || || ||| | Sbjct 39070 TCCAGGTTTAGGTGATGTCTACGGTGATGAATTCGAAGAATTGTATGAAAGATACGAAAG 39011 Query 75837 AGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAA 75895 || ||| || | || | ||| | | || | | | ||| ||| | | || | || Sbjct 39010 AGAAGGTAAGGGTAGATCC-ACTAT-CAAGGCTCAAAAGTTATGGTACTCCATCTTAGAA 38953 Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955 | || || |||||||| || |||| ||| | ||||||||||| ||||||||||| Sbjct 38952 GCTCAAACTGAGACTGGTACCCCATTCATGTTATACAAGGATGCCTGTAACAAGAAATCC 38893 Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 ||||||||||| ||||| | || ||| ||| || | || |||||| | || ||| Sbjct 38892 AACCAAAAGAACTTGGGTATGATTAAGTCCTCCAACTTGTGTTGTGAAATTGTTGAATAC 38833 Query 76016 ACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTC 76075 | ||| | | || || ||||| || || ||||| || || ||||||||| | ||| Sbjct 38832 TCCGATGAACAAGAAACCGCTGTGTGTAACTTGGCTTCCATTGCCCTTCCAGCCTTTGTT 38773 Query 76076 AA---TGAAGAGACTCGCACT---TTTGATTATGAAAAACTTCATGAAATCACAAAGATT 76129 | ||| |||| |||| | | | |||||| | || || ||| | ||| || Sbjct 38772 GAATCTGATGAGAAGAACACTTGGTACAACTTTGAAAAGTTACACGAGATCGCCAAGGTT 38713 Query 76130 GTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGA 76189 || | || || | || | || |||||||||| ||| || ||||| ||||| || Sbjct 38712 GTCTCTAAGAACTTGAATAAGATTATCGACAGAAATTATTACCCAGTTGAAACTGCTAGA 38653 Query 76190 AAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTT 76249 ||||| ||| || |||||||||||| | |||||||||||| | || |||| ||| Sbjct 38652 CGTTCTAACATGAGAAACAGACCTATTGCCCTTGGTGTTCAAGGTTTAGCTGATGCATTC 38593 Query 76250 AT-TTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTT 76308 || || || | | ||||||| || ||||| || | | || || ||||| Sbjct 38592 ATGTTACTGAGAATTC-CATTTGACTCTCCAGAAGCTAAATTGTTAAACATTCAAATCTT 38534 Query 76309 TGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGC---TGAAGCCCAAGG 76365 ||||||| | || || | | | ||||| ||||| || |||| |||| Sbjct 38533 TGAAACCCTTTACCATGGTGCTTTAGAGGCCTCCGTCGAATTAGCCATCGAAG---AAGG 38477 Query 76366 TTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGA--TATG 76423 | ||||| || ||||| |||||||| || |||||||| | | || || || |||| Sbjct 38476 TAAGTATGAAACTTTTGAAGGTTCTCCAGCTTCCCAAGGTATCTTGCAATTCGATTTATG 38417 Query 76424 TGGGAAGGTGAAACCAAGCTCAACTA--CGACTGGGATGTTCTCAAGGAACGCATCAAGG 76481 || || ||| |||| || | || ||||||||| | |||||| | |||| | Sbjct 38416 GGGTAA---GAAGCCAA-CTGATTTATGGGACTGGGATAACTTGAAGGAAAGAATCATGA 38361 Query 76482 AGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAA 76541 || ||| | | ||| | || | || ||||||||||| || || || | |||| Sbjct 38360 CCAATGGTTTAAGAAACTCCTTATTACTTGCTCCAATGCCAACTGCTTCTACTTCCCAAA 38301 Query 76542 TCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCC 76601 |||||||| | |||||||| || ||||||||||| | || || ||| |||||| | Sbjct 38300 TCTTGGGTTACAATGAATGTTTCGAACCATACACTTCCAATATTTACTCTAGAAGAGTGC 38241 Query 76602 TCGCAGGTGAGTTTGTCATTGTCAAC 76627 | || ||||| || ||||| ||| Sbjct 38240 TAGCTGGTGAATTCCAAATTGTTAAC 38215 >seq3 Length=1585198 Score = 104 bits (114), Expect = 3e-17 Identities = 136/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 27873 TTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCCGTGATTGAAGAGAAC 27932 ||||||||| | ||| |||| | | | || || ||||| ||||||||| | ||| Sbjct 969282 TTGTGCGATTCTATCACCTTGTTCAATGGCGAAATCCTTGTCAGAGTGATTGAATAAAAC 969223 Query 27933 GACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACCAACTTGA-ATACCAT 27991 || |||||||||||| | || |||| ||||| ||||| ||||| | | || ||||||| Sbjct 969222 AACCTTGACTTCACCTCTGTAATCGGCATCAACCACACCGGCACC-AGTGGAGATACCAT 969164 Query 27992 GCTTCACAGCGAGACCGGATCGTGGTGCAACACGACCATACACACCATTTGGCATGAGAA 28051 ||||||||| ||||| |||| ||| || || | ||| || ||| | || | || || Sbjct 969163 TCTTCACAGCAAGACCAGATCTTGGAGCGACTCTACCGTAGGTACCTTCAGGAACGATAA 969104 Query 28052 TGGCTA 28057 ||| || Sbjct 969103 TGGATA 969098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569428486240