Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq3 250 4e-61 seq14 131 2e-25 seq5 98.7 1e-15 >seq3 Length=1585198 Score = 250 bits (276), Expect = 4e-61 Identities = 553/817 (68%), Gaps = 24/817 (3%) Strand=Plus/Minus Query 17980 TAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTAG 18039 |||||||||||| || || ||||| || ||||| |||| ||||| || |||||||||| Sbjct 913831 TAATAATCTATCAGCGACGAATTCAACGTATTGACACATTAAATCACAGTTCATACCTAA 913772 Query 18040 TAGTCTGAAAGGTAGAGCATCAATAATAAAT-TCTTTCTCTATCTCAACAGACTCTTTTA 18098 || ||| || | ||||| | | || ||||| || || ||||||| || | | Sbjct 913771 TAACTTGACTGGCAAGGCATCGGTGAAGTATCTCTTT-TCAATGTCAACAGCTTCGGTGA 913713 Query 18099 TTATGTTTATTACCCTAGATTTTGGCAATT----TATTAATTATGTGATTATAATATAAT 18154 | || || || | | ||| || | | ||| | | |||| | | ||| Sbjct 913712 TGATCTTAGCAACAAT-GCTTT---CATCTGGAGTGTTATTCAAGTGAG---AGAACAAT 913660 Query 18155 AAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTT 18214 | ||| ||||| ||||||||||||||||||||||| | || ||||||||| || ||| Sbjct 913659 AGACAAGCAAAGTCAGTGTGTAAACCTTCATCTCTACAGATGAATTCGTTAGAGAAAGTT 913600 Query 18215 AACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAG 18274 || || ||||||| |||||| || || | ||| || || || || || || ||| ||| Sbjct 913599 AAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATGGAAGCAAAGGAACCAGAGAAG 913540 Query 18275 AATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGCTC 18334 || |||||||||||| ||||| || | ||||||||| | || | || | | || Sbjct 913539 AAGATACCCTCAACGGCAGCGAAGGCAACCAATCTTTCACCGAATAAGGCTTCA-TCATC 913481 Query 18335 AG-TATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGC 18393 | |||||| || |||||||| | | ||||| || || || || || Sbjct 913480 GGAGATCCATCTTAAGGCCCATTCAGCCTTTTCTCTAATACATGGGATGTGTTCAATGGC 913421 Query 18394 ATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATA 18453 || || || | ||| ||| || | ||| || | ||||||||||| || || || || Sbjct 913420 GTTGAATAAGTAATCAGCTTCCTTTGGATCCTTAACGTAAGTGTCGATCAATAAGGAGTA 913361 Query 18454 CATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTC-GG 18512 | ||||| |||||| ||||||| || || |||| || || || | || || || Sbjct 913360 AGTCTCAGAGTGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCTGG 913301 Query 18513 GATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAG 18572 ||| ||| | || | | || |||| |||||||| ||||| || ||||| |||| | Sbjct 913300 GAT-TTGCACTTCAGCAGAGAAGTTTTCAACCAAATTTTCATTGACAATACCATCAGATG 913242 Query 18573 ATGCGAAAAATGCCAAAACATATTTA-ATGAAATGTTTTTCATTATCCTTGA---GATTG 18628 ||||| || || || || | | | ||||| | | |||| || || || | ||| Sbjct 913241 CAGCGAAGAAGGCTAACAC-TCTAGAGATGAAGTATCTTTCGTTGTCATTCAATCTGTTG 913183 Query 18629 TTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCG 18688 ||||| || | || || || |||| ||||| |||||| | ||||| || || | |||| Sbjct 913182 TTCCAGTCGTGTAAGTCCTTGGATAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTCG 913123 Query 18689 GCCTGTTTGTACATTTTATAAATATCTTCATGTTGTATAGGAAATAATATATATCGTTTA 18748 |||| |||||||||| | || || | || || || || ||||| | ||| || Sbjct 913122 GCCTTCTTGTACATTTGCCAGATCTCGTGATATTTGATTGGGAATAAGACGAATCTCTTC 913063 Query 18749 TAATTTTTTATTAACATAGGTTCTTCCATTTTTCTAA 18785 | |||| |||| | |||||| ||| |||||||| Sbjct 913062 TTGTTTTCAGTTAATAAAGGTTCATCC--TTTTCTAA 913028 Score = 122 bits (134), Expect = 1e-22 Identities = 171/238 (72%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 155816 TAATAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGA 155875 ||| || |||||||| ||| |||| || || || || || || || || ||||| ||||| Sbjct 1231327 TAACAACATGCAAATTTTTGTTAAGACCTTAACAGGTAAGACCATCACTTTAGAGGTCGA 1231386 Query 155876 AGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCC 155935 | ||||| | |||| || || || || || ||||| || ||||| || || || Sbjct 1231387 ATCCTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACC 1231446 Query 155936 AGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGA 155995 || |||||||||||||| | ||||||||||| | ||||| ||||| || || || Sbjct 1231447 TGATCAACAAAGATTGATCTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTGTCCGA 1231506 Query 155996 TTATAATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 ||| | | ||||||| || | || | || || || |||||||| ||||| |||| Sbjct 1231507 TTACA--ACATCCAAAAGGAATCCACTTTACACTTGGTCTTAAGATTGAGAGGTGGTG 1231562 >seq14 Length=138463 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || |||| || || ||||| || || || || ||||| || ||| ||| Sbjct 121010 ATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTAGAGGTTGAATCCTCT 120951 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| || || || ||| || |||||||| ||||| || || || || ||| Sbjct 120950 GACACTATTGACAATGTCAAGTCTAAGATTCAAGATAAGGAAGGTATCCCACCTGATCAA 120891 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 |||||||| || | ||| |||||||| | |||||| ||||||||||| ||||| || Sbjct 120890 CAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGATTACAAC 120831 Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||| || | || | || || || |||||||| ||||| ||| Sbjct 120830 AT-TCAAAAGGAATCAACCTTGCACTTGGTTTTAAGATTGAGAGGTGGT 120783 >seq5 Length=915096 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/197 (72%), Gaps = 5/197 (3%) Strand=Plus/Minus Query 155856 ACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAA 155915 |||||| |||| | || ||| ||||||| ||| || || ||| |||||| ||| Sbjct 587758 ACTATTT-ATTATAGGTTGAATCCTCTGATACCATTGACAATGTCAAATCTAAAATCCAA 587700 Query 155916 GATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAA 155975 || || ||||| || || ||||| ||||||||||| || | ||| |||||||| | ||| Sbjct 587699 GACAAGGAAGGTATCCCACCAGATCAACAAAGATTAATCTTTGCTGGTAAGCAATTAGAA 587640 Query 155976 GATACCAGAACTTTATCAGATTATAATATATCCAAA--GAGGCGACGCTTCATTTAGTGT 156033 ||| |||||| | || || || || || ||||| || | || | || || || | Sbjct 587639 GATGGTAGAACTCTTTCCGACTACAACAT--CCAAAAGGAATCCACCTTGCACTTGGTCT 587582 Query 156034 TAAGATTAAGAGGCGGT 156050 | ||||||||||| ||| Sbjct 587581 TGAGATTAAGAGGTGGT 587565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871789586800