Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq3 201 2e-46 seq14 178 3e-39 seq5 104 5e-17 >seq3 Length=1585198 Score = 201 bits (222), Expect = 2e-46 Identities = 486/734 (66%), Gaps = 16/734 (2%) Strand=Plus/Minus Query 49646 TAATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAA 49705 |||||||||||| || || |||||||| ||||| ||||||| ||||| |||||||| || Sbjct 913831 TAATAATCTATCAGCGACGAATTCAACGTATTGACACATTAAATCACAGTTCATACCTAA 913772 Query 49706 TAATTTAAATGGTAATGCATCA-TCAATAAATTCtttttctatttctacagcttgtttaa 49764 ||| || | ||| || ||||| | || | |||||| | || || ||||||| | | Sbjct 913771 TAACTTGACTGGCAAGGCATCGGTGAAGTATCTCTTTT-CAATGTCAACAGCTTCGGTGA 913713 Query 49765 ttatcataattatattattttttgata---atttatatttaatatgattcgcatatatta 49821 | ||| || | | || ||| || | | |||| || ||| | | | || Sbjct 913712 TGATCTTAGCAACA--ATGCTTTCATCTGGAGTGTTATTCAAG-TGA---GAGAACAATA 913659 Query 49822 aACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTA 49881 ||| ||||| ||||| |||||||| || || ||| | || ||||| ||| ||||||| Sbjct 913658 GACAAGCAAAGTCAGTGTGTAAACCTTCATCTCTACAGATGAATTCGTTAGAGAAAGTTA 913599 Query 49882 ATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGA 49941 | ||||||||||| |||||||| || | ||| || || || ||||| || ||| |||| Sbjct 913598 AACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATGGAAGCAAAGGAACCAGAGAAGA 913539 Query 49942 ATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTA 50001 | |||||||| || || || || | | |||| | || || | || |||||| Sbjct 913538 AGATACCCTCAACGGCAGCGAAGGCAACCAATCTTTCACCGAATAAGGCTTCATCATCGG 913479 Query 50002 ATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTT 50061 | ||||| ||| ||||| || || |||| | | ||| | || || | ||| || || | Sbjct 913478 AGATCCATCTTAAGGCCCATTCAGCCTTTTCTCTAATACATGGGATGTGTTCAATGGCGT 913419 Query 50062 TAAATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACA 50121 | ||||| | || ||| | || ||||| || || Sbjct 913418 TGAATAAGTAATCAGCTTCCTTTGGATCCTTAACGTAAGTGTCGATCAATAAGGAGTAAG 913359 Query 50122 TTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAAT 50181 | ||||| |||| |||||| ||||| || || || | | ||||||| Sbjct 913358 TCTCAGAGTGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCTGGGA 913299 Query 50182 ACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTG 50241 || ||||| | | |||| |||||| ||||| ||| ||||||||||||||||| | Sbjct 913298 TTTGCACTTCAGCAGAGAAGTTTTCAACCAAATTTTCATTGACAATACCATCAGATGCAG 913239 Query 50242 CGAAGAATGCTAAAACGTATTTA-ATAAAATGTTTTTCATTATCTTTTAA---ATTTTCC 50297 ||||||| ||||| || | | | || || | | |||| || || || || || | | Sbjct 913238 CGAAGAAGGCTAACAC-TCTAGAGATGAAGTATCTTTCGTTGTCATTCAATCTGTTGTTC 913180 Query 50298 CAAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGAT 50357 || | | || || |||||||| | |||||| ||||| || || ||| ||| Sbjct 913179 CAGTCGTGTAAGTCCTTGGATAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTCGGCC 913120 Query 50358 TTTTTATACATTTG 50371 || || |||||||| Sbjct 913119 TTCTTGTACATTTG 913106 Score = 145 bits (160), Expect = 2e-29 Identities = 173/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | ||| || || |||||||| | || || ||| || ||||| || Sbjct 1231561 ACCACCTCTCAATCTTAAGACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAATCGGA 1231502 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || |||| | || || ||||| ||||| || ||||| ||||| |||||||||||||| Sbjct 1231501 CAAGGTTCTACCGTCTTCTAATTGCTTACCGGCGAAGATCAATCTTTGTTGATCAGGTGG 1231442 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || ||||| || ||||| || || || ||||| |||| || || ||||| || Sbjct 1231441 GATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAGGATTCGAC 1231382 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTATTA 192543 |||| ||| ||||| ||||| ||||| || |||| ||| || ||||| || ||| Sbjct 1231381 CTCTAAAGTGATGGTCTTACCTGTTAAGGTCTTAACAAAAATTTGCATGTTGTTA 1231327 >seq14 Length=138463 Score = 178 bits (196), Expect = 3e-39 Identities = 192/252 (76%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATA 192357 ||| ||| ||||||||||| | | ||| || || || || || | | |||| || || Sbjct 120773 GTTCAATGATACCACCTCTCAATCTTAAAACCAAGTGCAAGGTTGATTCCTTTTGA-ATG 120831 Query 192358 TTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGT 192417 || ||||||||||| |||| |||| || ||||| |||||||||||||||||||| ||| Sbjct 120832 TTGTAATCAGATAAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGT 120891 Query 192418 TGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCT 192477 ||||||||||| || ||||| |||||||| || ||| || ||||| |||| || Sbjct 120892 TGATCAGGTGGGATACCTTCCTTATCTTGAATCTTAGACTTGACATTGTCAATAGTGTCA 120951 Query 192478 GACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || ||||| || |||| ||| ||||| ||||||||||| || |||| || || ||||| Sbjct 120952 GAGGATTCAACCTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCATC 121011 Query 192538 TTATTAGAAAAA 192549 ||| | |||| Sbjct 121012 CTATAATTAAAA 121023 >seq5 Length=915096 Score = 104 bits (114), Expect = 5e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || || || || || || | || || ||| || || || || Sbjct 587565 ACCACCTCTTAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGA 587624 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | |||| |||| || ||||| |||||||||||||||||||| |||||||| ||||| Sbjct 587625 AAGAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGG 587684 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || ||||| || ||||| |||||| ||| ||||| || | ||| || ||||| || Sbjct 587685 GATACCTTCCTTGTCTTGGATTTTAGATTTGACATTGTCAATGGTATCAGAGGATTCAAC 587744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984479709886050