Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016-
03-01] 23 sequences; 12,320,962 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq3 196 9e-45
seq14 174 3e-38
seq5 95.1 2e-14
>seq3
Length=1585198
Score = 196 bits (216), Expect = 9e-45
Identities = 375/544 (69%), Gaps = 13/544 (2%)
Strand=Plus/Minus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
|||||||| || |||||| | |||||||| ||||| || || || | || || ||
Sbjct 913947 TTTTGGTAATCGGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCAGCCAAGGAGATGTTC 913888
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATA-CATATAA 38950
| ||| || || ||||| || | ||| ||| || || | | | | | || |||
Sbjct 913887 TCCATGAAGTCGAATGGGTTGGTAACATTGTAA-ATCTTCTTACAACCGAGGGCAACTAA 913829
Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010
||||||||| || || |||||||| ||||| ||||||| ||||| |||||||| |||||
Sbjct 913828 TAATCTATCAGCGACGAATTCAACGTATTGACACATTAAATCACAGTTCATACCTAATAA 913769
Query 39011 TTTAAATGGTAATGCATCA-TCAATAAATTCtttttctatttctacagcttgtttaatta 39069
|| | ||| || ||||| | || | |||||| | || || ||||||| | || |
Sbjct 913768 CTTGACTGGCAAGGCATCGGTGAAGTATCTCTTTT-CAATGTCAACAGCTTCGGTGATGA 913710
Query 39070 tcataattatattattttttgata---atttatatttaatatgattcgcatataGTAAAC 39126
|| || | | || ||| || | | |||| || ||| | | | || ||
Sbjct 913709 TCTTAGCAACA--ATGCTTTCATCTGGAGTGTTATTCAAG-TGA---GAGAACAATAGAC 913656
Query 39127 ATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATC 39186
| ||||| || || ||||||||||| || ||| | || ||||| ||| |||||||| |
Sbjct 913655 AAGCAAAGTCAGTGTGTAAACCTTCATCTCTACAGATGAATTCGTTAGAGAAAGTTAAAC 913596
Query 39187 CTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATA 39246
|||||||||| |||||||| || | ||| || || || ||||| || ||| ||||| |
Sbjct 913595 CTGGCATTAAACCTCTCTTCTTCAACCAGAAGATGGAAGCAAAGGAACCAGAGAAGAAGA 913536
Query 39247 TACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAA 39306
||||||| || || || || | | |||| | || || | || |||||| | |
Sbjct 913535 TACCCTCAACGGCAGCGAAGGCAACCAATCTTTCACCGAATAAGGCTTCATCATCGGAGA 913476
Query 39307 TCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAA 39366
|||| ||| |||||| || || |||| | | ||| | || || | ||| || || || |
Sbjct 913475 TCCATCTTAAGGCCCATTCAGCCTTTTCTCTAATACATGGGATGTGTTCAATGGCGTTGA 913416
Query 39367 ATAA 39370
||||
Sbjct 913415 ATAA 913412
>seq14
Length=138463
Score = 174 bits (192), Expect = 3e-38
Identities = 186/246 (76%), Gaps = 0/246 (0%)
Strand=Plus/Plus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|| ||||||||||| | || ||| || || || || || | || || ||| || |||
Sbjct 120778 ATGATACCACCTCTCAATCTTAAAACCAAGTGCAAGGTTGATTCCTTTTGAATGTTGTAA 120837
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| ||||||| || | || || ||||| ||||||||||| |||||||| ||||| |||
Sbjct 120838 TCAGATAAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCA 120897
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || ||||| |||||||| || ||| || ||||| ||||| || || |||
Sbjct 120898 GGTGGGATACCTTCCTTATCTTGAATCTTAGACTTGACATTGTCAATAGTGTCAGAGGAT 120957
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATTA 172076
|| || |||| ||| ||||| ||||||||||| || |||| ||| || ||||| ||| |
Sbjct 120958 TCAACCTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCATCCTATAA 121017
Query 172077 Taaaaa 172082
| ||||
Sbjct 121018 TTAAAA 121023
>seq5
Length=915096
Score = 95.1 bits (104), Expect = 2e-14
Identities = 129/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
||||||||| | || || || || || || || | || || || || || || ||
Sbjct 587565 ACCACCTCTTAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGA 587624
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
| || || | || || ||||| ||||||||||| |||||||| ||||| || |||||
Sbjct 587625 AAGAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGG 587684
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|| ||||| || ||||| |||||| ||| ||||| || ||||| || ||||| ||
Sbjct 587685 GATACCTTCCTTGTCTTGGATTTTAGATTTGACATTGTCAATGGTATCAGAGGATTCAAC 587744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135739773400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |