Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq3 196 9e-45 seq14 174 3e-38 seq5 95.1 2e-14 >seq3 Length=1585198 Score = 196 bits (216), Expect = 9e-45 Identities = 375/544 (69%), Gaps = 13/544 (2%) Strand=Plus/Minus Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891 |||||||| || |||||| | |||||||| ||||| || || || | || || || Sbjct 913947 TTTTGGTAATCGGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCAGCCAAGGAGATGTTC 913888 Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATA-CATATAA 38950 | ||| || || ||||| || | ||| ||| || || | | | | | || ||| Sbjct 913887 TCCATGAAGTCGAATGGGTTGGTAACATTGTAA-ATCTTCTTACAACCGAGGGCAACTAA 913829 Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010 ||||||||| || || |||||||| ||||| ||||||| ||||| |||||||| ||||| Sbjct 913828 TAATCTATCAGCGACGAATTCAACGTATTGACACATTAAATCACAGTTCATACCTAATAA 913769 Query 39011 TTTAAATGGTAATGCATCA-TCAATAAATTCtttttctatttctacagcttgtttaatta 39069 || | ||| || ||||| | || | |||||| | || || ||||||| | || | Sbjct 913768 CTTGACTGGCAAGGCATCGGTGAAGTATCTCTTTT-CAATGTCAACAGCTTCGGTGATGA 913710 Query 39070 tcataattatattattttttgata---atttatatttaatatgattcgcatataGTAAAC 39126 || || | | || ||| || | | |||| || ||| | | | || || Sbjct 913709 TCTTAGCAACA--ATGCTTTCATCTGGAGTGTTATTCAAG-TGA---GAGAACAATAGAC 913656 Query 39127 ATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATC 39186 | ||||| || || ||||||||||| || ||| | || ||||| ||| |||||||| | Sbjct 913655 AAGCAAAGTCAGTGTGTAAACCTTCATCTCTACAGATGAATTCGTTAGAGAAAGTTAAAC 913596 Query 39187 CTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATA 39246 |||||||||| |||||||| || | ||| || || || ||||| || ||| ||||| | Sbjct 913595 CTGGCATTAAACCTCTCTTCTTCAACCAGAAGATGGAAGCAAAGGAACCAGAGAAGAAGA 913536 Query 39247 TACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAA 39306 ||||||| || || || || | | |||| | || || | || |||||| | | Sbjct 913535 TACCCTCAACGGCAGCGAAGGCAACCAATCTTTCACCGAATAAGGCTTCATCATCGGAGA 913476 Query 39307 TCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAA 39366 |||| ||| |||||| || || |||| | | ||| | || || | ||| || || || | Sbjct 913475 TCCATCTTAAGGCCCATTCAGCCTTTTCTCTAATACATGGGATGTGTTCAATGGCGTTGA 913416 Query 39367 ATAA 39370 |||| Sbjct 913415 ATAA 913412 >seq14 Length=138463 Score = 174 bits (192), Expect = 3e-38 Identities = 186/246 (76%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 || ||||||||||| | || ||| || || || || || | || || ||| || ||| Sbjct 120778 ATGATACCACCTCTCAATCTTAAAACCAAGTGCAAGGTTGATTCCTTTTGAATGTTGTAA 120837 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || ||||||| || | || || ||||| ||||||||||| |||||||| ||||| ||| Sbjct 120838 TCAGATAAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCA 120897 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| || ||||| |||||||| || ||| || ||||| ||||| || || ||| Sbjct 120898 GGTGGGATACCTTCCTTATCTTGAATCTTAGACTTGACATTGTCAATAGTGTCAGAGGAT 120957 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATTA 172076 || || |||| ||| ||||| ||||||||||| || |||| ||| || ||||| ||| | Sbjct 120958 TCAACCTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCATCCTATAA 121017 Query 172077 Taaaaa 172082 | |||| Sbjct 121018 TTAAAA 121023 >seq5 Length=915096 Score = 95.1 bits (104), Expect = 2e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||||||||| | || || || || || || || | || || || || || || || Sbjct 587565 ACCACCTCTTAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGA 587624 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 | || || | || || ||||| ||||||||||| |||||||| ||||| || ||||| Sbjct 587625 AAGAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGG 587684 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 || ||||| || ||||| |||||| ||| ||||| || ||||| || ||||| || Sbjct 587685 GATACCTTCCTTGTCTTGGATTTTAGATTTGACATTGTCAATGGTATCAGAGGATTCAAC 587744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135739773400