Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3 136 4e-27 seq14 116 3e-21 seq5 93.3 4e-14 >seq3 Length=1585198 Score = 136 bits (150), Expect = 4e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||| || |||| ||||| || || || | || || ||| || | Sbjct 1231334 ATGCAAATTTTTGTTAAGACCTTAACAGGTAAGACCATCACTTTAGAGGTCGAATCCTCT 1231393 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| ||||| || || || |||||| Sbjct 1231394 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGATCAA 1231453 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | |||||||| ||||| || || | || || |||| | |||| ||||| ||| Sbjct 1231454 CAAAGATTGATCTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTGTCCGATTACAAC 1231513 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 || ||||||||||| || |||||||||| || ||||| | || || || Sbjct 1231514 ATCCAAAAGGAATCCACTTTACACTTGGTCTTAAGATTGAGAGGTGGTGG 1231563 >seq14 Length=138463 Score = 116 bits (128), Expect = 3e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 24699 ATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAG 24758 ||| |||||| || || |||| || |||| ||||| || || || | || || ||| Sbjct 121015 ATAGGATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTAGAGGTTGAAT 120956 Query 24759 CCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCG 24818 || | ||||| | || | || || ||||| ||||| || ||||| || || || | Sbjct 120955 CCTCTGACACTATTGACAATGTCAAGTCTAAGATTCAAGATAAGGAAGGTATCCCACCTG 120896 Query 24819 ATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATT 24878 |||||||| | || |||||||| || || || | || ||| |||| | || |||| Sbjct 120895 ATCAACAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGATT 120836 Query 24879 ATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | ||||||||||||||||| || | |||||||| || ||||| | || || Sbjct 120835 ACAACATTCAAAAGGAATCAACCTTGCACTTGGTTTTAAGATTGAGAGGTGG 120784 >seq5 Length=915096 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 || ||||||||||| ||||| || || || ||||||||| | || |||||||| || || Sbjct 587708 AAAATCCAAGACAAGGAAGGTATCCCACCAGATCAACAAAGATTAATCTTTGCTGGTAAG 587649 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || | || ||| |||| | || || || ||||| ||||||||||| || | ||| Sbjct 587648 CAATTAGAAGATGGTAGAACTCTTTCCGACTACAACATCCAAAAGGAATCCACCTTGCAC 587589 Query 24908 TTGGTGTTGCGATT 24921 ||||| ||| |||| Sbjct 587588 TTGGTCTTGAGATT 587575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897470654440