Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq14 95.1 1e-14 seq3 89.7 4e-13 >seq14 Length=138463 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || || || || ||||| || || ||||| || | || || | Sbjct 121010 ATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTAGAGGTTGAATCCTCT 120951 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| | | | | || || |||||| || || ||||| | || |||||| Sbjct 120950 GACACTATTGACAATGTCAAGTCTAAGATTCAAGATAAGGAAGGTATCCCACCTGATCAA 120891 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||| | || | ||| ||||| || | || |||| ||||| | | ||||||||| Sbjct 120890 CAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGATTACAAC 120831 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| ||||| || |||||| |||| |||||| || |||| || Sbjct 120830 ATTCAAAAGGAATCAACCTTGCACTTGGTTTTAAGATTGAGAGGTGG 120784 >seq3 Length=1585198 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCC 110328 || |||||||| ||||| || || ||||| || || ||||| || | || || | || Sbjct 1231331 AACATGCAAATTTTTGTTAAGACCTTAACAGGTAAGACCATCACTTTAGAGGTCGAATCC 1231390 Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388 | || ||| | | | | || || ||||| ||||| ||||| | || || Sbjct 1231391 TCT-GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGA 1231449 Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448 |||||||||| | || | || ||||| || | || || | ||||| || | ||||| Sbjct 1231450 TCAACAAAGATTGATCTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTGTCCGATTA 1231509 Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||| ||||| ||||| || || ||| |||| |||||| || |||| || Sbjct 1231510 CAACATCCAAAAGGAATCCACTTTACACTTGGTCTTAAGATTGAGAGGTGG 1231560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841484275339