Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq14 141 1e-28 seq3 122 1e-22 seq5 120 5e-22 >seq14 Length=138463 Score = 141 bits (156), Expect = 1e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || || ||||| || || || || ||| | || || ||| | Sbjct 121009 TGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTAGAGGTTGAATCCTCTG 120950 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| | ||||| || ||| || ||| ||| ||||| || ||||| ||||||| Sbjct 120949 ACACTATTGACAATGTCAAGTCTAAGATTCAAGATAAGGAAGGTATCCCACCTGATCAAC 120890 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | || ||||| ||||| |||||||| ||| |||||| ||| | ||||| || | Sbjct 120889 AAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGATTACAACA 120830 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||| ||||| || | || || || ||| |||| ||||| |||| Sbjct 120829 TTCAAAAGGAATCAACCTTGCACTTGGTTTTAAGATTGAGAGGTGGTA 120782 >seq3 Length=1585198 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || |||||||| || || || ||| | || || ||| | Sbjct 1231335 TGCAAATTTTTGTTAAGACCTTAACAGGTAAGACCATCACTTTAGAGGTCGAATCCTCTG 1231394 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| | ||||| || || || ||| || ||||| || ||||| ||||||| Sbjct 1231395 ACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGATCAAC 1231454 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | || || || ||||| |||||||| || |||||| || | ||||| || | Sbjct 1231455 AAAGATTGATCTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTGTCCGATTACAACA 1231514 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258 | ||||| ||||| ||| | || || || ||| |||| ||||| ||| Sbjct 1231515 TCCAAAAGGAATCCACTTTACACTTGGTCTTAAGATTGAGAGGTGGT 1231561 >seq5 Length=915096 Score = 120 bits (132), Expect = 5e-22 Identities = 132/176 (75%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| ||| | ||||| ||| |||||| ||| || ||||| || ||||| |||||| Sbjct 587732 GATACCATTGACAATGTCAAATCTAAAATCCAAGACAAGGAAGGTATCCCACCAGATCAA 587673 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 |||||| | || ||||| ||||| |||||||| ||| |||||| | | || || || Sbjct 587672 CAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTCTTTCCGACTACAAC 587613 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAAT 146266 || ||||| ||||| || | || || || || |||||||||| ||| | ||||| Sbjct 587612 ATCCAAAAGGAATCCACCTTGCACTTGGTCTTGAGATTAAGAGGTGGTTACTAAAT 587557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786166173977160