Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq12 150 2e-31 seq11 100 4e-16 seq8 89.7 7e-13 >seq12 Length=324105 Score = 150 bits (166), Expect = 2e-31 Identities = 285/412 (69%), Gaps = 23/412 (6%) Strand=Plus/Plus Query 168581 AGGTGTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTAC 168640 |||||| ||| ||||| | | ||| || ||| | |||| |||||| | | || || || Sbjct 266659 AGGTGTGAAAATTTGGGATGGTAACGGATCTAGAGAATATTTAGACTCTTTAGGATTAAC 266718 Query 168641 CGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGC 168700 ||||||| |||||| |||||||||||| |||||||||| ||||||||||| || || Sbjct 266719 TGAAAGAAGAGAAGGCGATTTAGGTCCAGTTTATGGATTCCAATGGAGACACTTTGGTGC 266778 Query 168701 TCAATATATTGACTGTGATACAGATTACACCGGACAAGGAGTA-GACCAATTAAGTCAAA 168759 | |||| || |||||| | |||||| | || |||| ||| || |||||| | ||| Sbjct 266779 AGAGTATACAGATTGTGATGCTGATTACTCTGG-TAAGGGGTATGATCAATTAGCTAAAA 266837 Query 168760 CTATAAATACTTTACACAACAATCCGGAAAATAGAAGAA-TATTAATTA-ATAGTTGGGA 168817 ||| ||||||| | || ||||| | ||||||||| |||| ||| | ||| | Sbjct 266838 TTATTGATACTTTGAAAAATAATCCATACGATAGAAGAATTATT--TTATCTGCATGGAA 266895 Query 168818 TGTACCACAACTTGATAAAATGGTTCTTCCCCCTTGTCA-CACTTTAGTGCAATTTTATG 168876 | ||| | | | |||||| | || || ||||| ||| || ||||| |||| Sbjct 266896 TCCACCTGCATTCAAGGAAATGGCATTACCACCATGTCATGTGTTTTGT-CAATTCTATG 266954 Query 168877 T----------AAGGA-----AAAAATCAATCTTAGATTGTCAGTTGTATCAAAGATCAG 168921 | || || ||| ||| ||| ||||| ||||||||||||| Sbjct 266955 TGAACTTCCCAAAAGATGGAGGTAAACCAAGATTATCATGTCAAATGTATCAAAGATCTT 267014 Query 168922 CTGATTTAGGATTAGGAGTACCTTATAATATTGGATTTTATTCATTTTTAAC 168973 |||| | |||||||| || |||| ||||||| || ||||||||| || || Sbjct 267015 GTGATATGGGATTAGGTGTGCCTTTCAATATTGCATCTTATTCATTATTGAC 267066 >seq11 Length=430679 Score = 100 bits (110), Expect = 4e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 51957 ACATTTAAAATGAATTTGGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAA 52016 ||||| | | |||||||| || |||| ||||||| || ||||| ||||| |||||| Sbjct 153520 ACATTCAGATTGAATTTGTCTGTGACGTCTCCATATAACGCAGATTTCGATGGTGATGAA 153461 Query 52017 ATGAATTTACATGTTCCTCAATCATATGGAGCTACTGCTGAATTA 52061 ||||||||||| ||||||||||| |||| | ||| ||||||||| Sbjct 153460 ATGAATTTACACGTTCCTCAATCTTATGAAACTAGAGCTGAATTA 153416 >seq8 Length=743908 Score = 89.7 bits (98), Expect = 7e-13 Identities = 154/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 51838 AAGTTGGAGACTTGGTTAAAAGACA-ATTGATGGATGGTGATGATGTACTATTAAATAGG 51896 ||||||| || | || ||||||| || || | |||||||| || ||||| ||||| Sbjct 714512 AAGTTGGTGATGTTGTCGAAAGACACATCGAAG-ATGGTGATATAGTGCTATTCAATAGA 714570 Query 51897 CAACCAACACTTCATAAAGCTTCTATGCAAAGTTTTAAAGTTAAAATTCAACCAGTAAAA 51956 ||||| || | || | | ||||| | | | | | ||| | ||| | | Sbjct 714571 CAACCTTCATTACACAGATTATCTATTCTATCTCATTTTGCTAAGGTGAGGCCATGGAGA 714630 Query 51957 ACATTTAAAATGAATTTGGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAA 52016 || |||| | ||||| | | || || | | |||||||||||||||||||| |||||| Sbjct 714631 ACTTTTAGACTGAATGAGTGTGTGTGTACACCTTATAATGCTGATTTTGATGGTGATGAA 714690 Query 52017 ATGAATTTACATGTTCCTCAATCATATGGAGCTACTGCTGA 52057 |||||||||||||||||||| | | | ||||| ||||| Sbjct 714691 ATGAATTTACATGTTCCTCAGACTGAAGAAGCTAGAGCTGA 714731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635177417386440