Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq12 149 8e-31 seq11 95.1 2e-14 seq8 89.7 6e-13 seq5 82.4 1e-10 >seq12 Length=324105 Score = 149 bits (164), Expect = 8e-31 Identities = 338/501 (67%), Gaps = 27/501 (5%) Strand=Plus/Plus Query 171666 AGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTAC 171725 |||||| ||| ||||| ||| ||| || ||| | |||| |||||| | | || || || Sbjct 266659 AGGTGTGAAAATTTGGGATGGTAACGGATCTAGAGAATATTTAGACTCTTTAGGATTAAC 266718 Query 171726 TGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGC 171785 |||||||| |||||| |||||||||||| |||||||||| ||||||||||| || || Sbjct 266719 TGAAAGAAGAGAAGGCGATTTAGGTCCAGTTTATGGATTCCAATGGAGACACTTTGGTGC 266778 Query 171786 TCAATATATCGACTGTTATACAGATTACACAGGACAAGGAGT-GGACCAATTAAGTCAAA 171844 | |||| || ||| || | |||||| | || |||| || || |||||| | ||| Sbjct 266779 AGAGTATACAGATTGTGATGCTGATTACTCTGG-TAAGGGGTATGATCAATTAGCTAAAA 266837 Query 171845 CTATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGA--TAGTTGGAA 171902 |||| ||||||| |||| || ||| | |||||| | ||| || | | ||||| Sbjct 266838 TTATTGATACTTTGAAAAATAATCCATACGATAGAAGAA--TTATTTTATCTGCATGGAA 266895 Query 171903 TGTACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCACACTTTAGCACAATTTTATG- 171961 | |||| | | | |||||| | || || || || || ||||| |||| Sbjct 266896 TCCACCTGCATTCAAGGAAATGGCATTACCACCATGTCATGTGTTTTGTCAATTCTATGT 266955 Query 171962 -----TCAGaaaa---------aaaTCAATCTTAGATTGTCAGTTATATCAAAGATCAGC 172007 || |||| ||| ||| ||| ||||| | ||||||||||| Sbjct 266956 GAACTTCCCAAAAGATGGAGGTAAACCAAGATTATCATGTCAAATGTATCAAAGATCTTG 267015 Query 172008 TGATTTAGGATTGGGGGTACCTTATAATATTGGATTTTATTCATTTTTAA--TACTTGTG 172065 |||| | ||||| || || |||| ||||||| || ||||||||| || | ||| || Sbjct 267016 TGATATGGGATTAGGTGTGCCTTTCAATATTGCATCTTATTCATTATTGACTTACATG-A 267074 Query 172066 TTAAGTAAATGGTGCA-ATTTAACTCCAGGAAAGTTTATTCATACTTTTGGAGATGTTCA 172124 || | || ||| | || || ||||| | || ||||| ||| | || ||| ||| Sbjct 267075 TTGCTCACATTGTGGATATGGAA--CCAGGTGAATTCATTCACACTATGGGTGATTCTCA 267132 Query 172125 CGTGTATTCAAATCATGTTGA 172145 ||||| | |||| ||||| Sbjct 267133 TGTGTACTGTGATCACGTTGA 267153 >seq11 Length=430679 Score = 95.1 bits (104), Expect = 2e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 50407 ACATTTAAAATGAATTTAGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAA 50466 ||||| | | ||||||| || |||| ||||||| || ||||| ||||| |||||| Sbjct 153520 ACATTCAGATTGAATTTGTCTGTGACGTCTCCATATAACGCAGATTTCGATGGTGATGAA 153461 Query 50467 ATGAATTTACATGTTCCTCAATCATATGGAGCTACTGCTGAATTA 50511 ||||||||||| ||||||||||| |||| | ||| ||||||||| Sbjct 153460 ATGAATTTACACGTTCCTCAATCTTATGAAACTAGAGCTGAATTA 153416 >seq8 Length=743908 Score = 89.7 bits (98), Expect = 6e-13 Identities = 154/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 50288 AAGTTGGAGACTTGGTTAAAAGACA-ATTGATAGATGGTGATGATGTACTATTAAATAGG 50346 ||||||| || | || ||||||| || || |||||||||| || ||||| ||||| Sbjct 714512 AAGTTGGTGATGTTGTCGAAAGACACATCGA-AGATGGTGATATAGTGCTATTCAATAGA 714570 Query 50347 CAACCAACACTTCATAAAGCTTCTATGCAAAGTTTTAAAGTTAAAATTCAACCAGTAAAA 50406 ||||| || | || | | ||||| | | | | | ||| | ||| | | Sbjct 714571 CAACCTTCATTACACAGATTATCTATTCTATCTCATTTTGCTAAGGTGAGGCCATGGAGA 714630 Query 50407 ACATTTAAAATGAATTTAGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAA 50466 || |||| | ||||| | || || | | |||||||||||||||||||| |||||| Sbjct 714631 ACTTTTAGACTGAATGAGTGTGTGTGTACACCTTATAATGCTGATTTTGATGGTGATGAA 714690 Query 50467 ATGAATTTACATGTTCCTCAATCATATGGAGCTACTGCTGA 50507 |||||||||||||||||||| | | | ||||| ||||| Sbjct 714691 ATGAATTTACATGTTCCTCAGACTGAAGAAGCTAGAGCTGA 714731 >seq5 Length=915096 Score = 82.4 bits (90), Expect = 1e-10 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 193347 ATTTTTATAGGGCCAACTTATTACCATCGTCTTAAACACATGGTTAAGGATAAAATGCAT 193406 ||||| | || || | |||||| || | || |||||||| ||||| ||||| Sbjct 162123 ATTTTCTTTGGTCCTATTTATTATCAAAAATTGAAGCACATGGTGTTAGATAAGATGCAC 162064 Query 193407 GCTAGAAGTCATGGGC-AAGTGACTACTTTACATCGACAACCAAATTGTGGTCGTTCTCA 193465 || ||| | || | ||| | | || || | ||||||||| ||| | ||| Sbjct 162063 GCCAGAGCTAGAGGTCCAAGAGCCGTGTTAAC-TAGACAACCAACCGAGGGTAGATCTAG 162005 Query 193466 AGGTGGAGGTTTAAGATTTGGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGCTAC 193525 || ||| ||||| ||||| ||||||||||||| ||| ||| || | | ||||||| | Sbjct 162004 AGATGGTGGTTTGAGATTGGGAGAAATGGAAAGAGATTGTGTTATCGCATATGGTGCCTC 161945 Query 193526 TCAATTCTTAAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGAT 193577 |||||| ||| |||||| || | ||| ||||||| | ||| | || ||| Sbjct 161944 TCAATTGTTATTAGAAAGATTGATGTTGAGTTCTGATGCCTTTGATGTTGAT 161893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628531019297280