Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq3 122 8e-23 seq14 107 2e-18 >seq3 Length=1585198 Score = 122 bits (134), Expect = 8e-23 Identities = 169/235 (72%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 25169 AACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAA 25228 |||||||||||| | ||||| || || ||||| || || | ||||| | || |||||| Sbjct 1231328 AACAACATGCAAATTTTTGTTAAGACCTTAACAGGTAAGACCATCACTTTAGAGGTCGAA 1231387 Query 25229 GCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCC 25288 || || ||||| || | || || || || || || || ||||| || || Sbjct 1231388 TCCTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCT 1231447 Query 25289 GATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCG 25346 ||||| |||||| | || | || ||| || ||| | ||||| | ||||| |||| || Sbjct 1231448 GATCAACAAAGATTGATCTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTGTC--CG 1231505 Query 25347 ATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||||| || ||||| |||||||| | || || || |||||||||||||| || Sbjct 1231506 ATTACAACATCCAAAAGGAATCCACTTTACACTTGGTCTTAAGATTGAGAGGTGG 1231560 >seq14 Length=138463 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || || ||||| || || | ||||| | || || ||| || Sbjct 121010 ATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTAGAGGTTGAATCCTCT 120951 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || ||||| || | || || || ||| ||||| || ||||| || || ||||| Sbjct 120950 GACACTATTGACAATGTCAAGTCTAAGATTCAAGATAAGGAAGGTATCCCACCTGATCAA 120891 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 |||||| | || | | || || ||| | ||||||| ||||| | | |||||||| Sbjct 120890 CAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGATTACAAC 120831 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||| ||||| ||| | || || || |||||||||||||| || Sbjct 120830 ATTCAAAAGGAATCAACCTTGCACTTGGTTTTAAGATTGAGAGGTGG 120784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094272035360