Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016-
03-01] 23 sequences; 12,320,962 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq3 122 8e-23
seq14 107 2e-18
>seq3
Length=1585198
Score = 122 bits (134), Expect = 8e-23
Identities = 169/235 (72%), Gaps = 4/235 (2%)
Strand=Plus/Plus
Query 25169 AACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAA 25228
|||||||||||| | ||||| || || ||||| || || | ||||| | || ||||||
Sbjct 1231328 AACAACATGCAAATTTTTGTTAAGACCTTAACAGGTAAGACCATCACTTTAGAGGTCGAA 1231387
Query 25229 GCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCC 25288
|| || ||||| || | || || || || || || || ||||| || ||
Sbjct 1231388 TCCTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCT 1231447
Query 25289 GATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCG 25346
||||| |||||| | || | || ||| || ||| | ||||| | ||||| |||| ||
Sbjct 1231448 GATCAACAAAGATTGATCTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTGTC--CG 1231505
Query 25347 ATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
||||||| || ||||| |||||||| | || || || |||||||||||||| ||
Sbjct 1231506 ATTACAACATCCAAAAGGAATCCACTTTACACTTGGTCTTAAGATTGAGAGGTGG 1231560
>seq14
Length=138463
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || || || ||||| || || | ||||| | || || ||| ||
Sbjct 121010 ATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTAGAGGTTGAATCCTCT 120951
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || || || ||| ||||| || ||||| || || |||||
Sbjct 120950 GACACTATTGACAATGTCAAGTCTAAGATTCAAGATAAGGAAGGTATCCCACCTGATCAA 120891
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|||||| | || | | || || ||| | ||||||| ||||| | | ||||||||
Sbjct 120890 CAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGATTACAAC 120831
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|||||||| ||||| ||| | || || || |||||||||||||| ||
Sbjct 120830 ATTCAAAAGGAATCAACCTTGCACTTGGTTTTAAGATTGAGAGGTGG 120784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445094272035360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |