Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016-
03-01] 23 sequences; 12,320,962 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq3 158 1e-33
seq12 120 2e-22
seq4 98.7 8e-16
>seq3
Length=1585198
Score = 158 bits (174), Expect = 1e-33
Identities = 398/601 (66%), Gaps = 28/601 (5%)
Strand=Plus/Plus
Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756
|| || ||| | || ||||| ||||||| || || |||||||||||||| || || |
Sbjct 913067 AGATTCGTCTTATTCCCAATCAAATATCACGAGATCTGGCAAATGTACAAGAAGGCCGAA 913126
Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTA--------GCACATT 43808
|| || || ||||| || |||||| ||||||| | || |||||| | |||
Sbjct 913127 GCTTCCTTCTGGACTGCCGAAGAAATTGATTTATCCAAGGACTTACACGACTGGAACAAC 913186
Query 43809 GGATTGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTG 43868
||||| || | ||| |||| | | || || ||| || || || || || ||||
Sbjct 913187 AGATTGAATGACAAC-----GAAAGATACTTCATCTCTAGAGTGTTAGCCTTCTTCGCTG 913241
Query 43869 CGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTAC 43928
| || || || |||||||||||||||||| || | ||||| ||| | |
Sbjct 913242 CATCTGATGGTATTGTCAATGAAAATTTGGTTGAAAACTTCTCTGCTGAAGTGCAAATCC 913301
Query 43929 CAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGT 43988
||||||| |||||| || || || ||||| || ||||| || || || || | |
Sbjct 913302 CAGAAGCCAAATGTTTCTACGGTTTCCAAATCATGATGGAAAACATACACTCTGAGACTT 913361
Query 43989 ACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC--ATCGATTGTTTAA 44046
|| | |||| || || ||| | || ||| || ||||| || || || ||
Sbjct 913362 ACTCCTTATTGATCGACACTTACGTTAAGGAT--CCAAAGGAAGCTGATTACTTATTCAA 913419
Query 44047 TGCGATAGAA-ACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAA 44105
|| || ||| ||| | || |||| | | || || || |||||| | | ||||||
Sbjct 913420 CGCCATTGAACACA-TCCCATGTATTAGAGAAAAGGCTGAATGGGCCTTAAGATGGAT-- 913476
Query 44106 ATTCAAATGAT------TCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCA 44159
|| ||||| | || || ||| || | || || || || | || || || |
Sbjct 913477 -CTCCGATGATGAAGCCTTATTCGGTGAAAGATTGGTTGCCTTCGCTGCCGTTGAGGGTA 913535
Query 44160 TTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTG 44219
| ||||| || || || ||||| |||| || ||||| ||||| ||||||| ||||| |
Sbjct 913536 TCTTCTTCTCTGGTTCCTTTGCTTCCATCTTCTGGTTGAAGAAGAGAGGTTTAATGCCAG 913595
Query 44220 GGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTT 44279
| || || || || || || || || || | |||||||| ||||| || |||||||
Sbjct 913596 GTTTAACTTTCTCTAACGAATTCATCTGTAGAGATGAAGGTTTACACACTGACTTTGCTT 913655
Query 44280 G 44280
|
Sbjct 913656 G 913656
>seq12
Length=324105
Score = 120 bits (132), Expect = 2e-22
Identities = 424/657 (65%), Gaps = 28/657 (4%)
Strand=Plus/Plus
Query 40781 ATTATCAGAAAGAGGAGTGCACATTTGGAATGCGCACAGTTCTAAAACATATTT-GTCTA 40839
|||||||| ||| ||| | |||||| ||| || | |||| | |||||| | ||
Sbjct 266647 ATTATCAGCTCAAGGTGTGAAAATTTGGGATGGTAACGGATCTAGAGAATATTTAGACTC 266706
Query 40840 GCATAGGATTACAAGATAGGGATGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGC 40899
|||||||| || || ||||| ||| | ||||| ||||||||||| || | |
Sbjct 266707 TT-TAGGATTAACTGAAAGAAGAGAAGGCGATTTAGGTCCAGTTTATGGATTCCAATGGA 266765
Query 40900 GACATTTTGGAGCAAAATATGACACTATGTACT-CTGATTATACCAATAAAGGAATGGAT 40958
|||| ||||| ||| | ||| ||| ||| | ||||||| | ||| || |||
Sbjct 266766 GACACTTTGGTGCAGAGTAT-ACAGATTGTGATGCTGATTACTCTGGTAAGGGGTATGAT 266824
Query 40959 CAATTACAGTGCGTTATAGATACGATTAAATCCGATCC---CGATAGCCGACGTATAATA 41015
|||||| |||| ||||| | ||| |||| |||||| || || ||
Sbjct 266825 CAATTAGCTAAAATTATTGATACTTTGAAAAATAATCCATACGATAGAAGA---ATTATT 266881
Query 41016 TTGTGCGCGTGGAACCCAACGGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTA 41075
|| | || ||||| ||| | | | | |||||||| ||||| |||||| ||||
Sbjct 266882 TTATCTGCATGGAATCCACCTGCATTCAAGGAAATGGCATTACCACCATGTCATGTGTTT 266941
Query 41076 TGTCAGTTTTACGT-----TTGCAAT-------GGTGAAC------TGTCATGTCAATTG 41117
||||| || || || | ||| ||| ||| | ||||||||| ||
Sbjct 266942 TGTCAATTCTATGTGAACTTCCCAAAAGATGGAGGTAAACCAAGATTATCATGTCAAATG 267001
Query 41118 TATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTG 41177
||||||||||| |||| |||||| |||| || || || || || || |||| | |
Sbjct 267002 TATCAAAGATCTTGTGATATGGGATTAGGTGTGCCTTTCAATATTGCATCTTATTCATTA 267061
Query 41178 CTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTA 41237
| || || |||||||| ||| || || | |||| |||||||| ||||||| |
Sbjct 267062 TTGACTTACATGATTGCTCACATTGTGGATATGGAACCAGGTGAATTCATTCACACTATG 267121
Query 41238 GGAGATGGACATATTTACATTAATCACATAGAGCCGTTAACAGAACAACTGACACGAAAA 41297
|| ||| ||| | ||| | ||||| | || | || | ||||||| ||| ||
Sbjct 267122 GGTGATTCTCATGTGTACTGTGATCACGTTGATGCATTGAAAGAACAAATGAGTAGAGTG 267181
Query 41298 CCTAGACCATTTCCAACGCTACTTATTAAACGCGCTGTTGAAAACATTGATGATTTTTGC 41357
|||||| |||| || | | ||||| | | ||| | || ||||||||
Sbjct 267182 CCTAGAGCATTCCCTAAATTGAAGATTAAGAGAACAGTTACTGATATCGATGATTTCAAA 267241
Query 41358 ATCGATGATTTTGTCGTTTGCGATTACAATCCGTACCCTAAAATCCACATGGACATG 41414
| |||||||| | || ||||||||||| ||| | ||| | ||| |||||
Sbjct 267242 TTTGATGATTTCGAAATTGTTGATTACAATCCTTACAAAACTATCAAGATGCACATG 267298
>seq4
Length=1369417
Score = 98.7 bits (108), Expect = 8e-16
Identities = 283/431 (66%), Gaps = 16/431 (4%)
Strand=Plus/Minus
Query 19360 TATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA-- 19417
||||| ||||| ||| || ||||| || ||||| ||| || || ||||| | | |
Sbjct 874437 TATGGACCACCTGGTACCGGTAAAACTTTGATTGCTAGACAAATTGGTAAAATGTTGAAT 874378
Query 19418 -CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAA 19476
| | ||||| || ||||| |||||||| || || | |||||||| ||| ||
Sbjct 874377 GCTAGGGAACCT---AAGATTGTTAATGGTCCAGATATGCTTTCCAAATATGTCGGTGAA 874321
Query 19477 TCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACA-AAAACGTTTAGG 19535
|| |||| || | || | || || |||||||| ||| | |||| | | |
Sbjct 874320 TCTGAAGGTAACATTCGTAAACTTTTCCAAGATGCTGAAGATGAATATAAAAAGA--AAG 874263
Query 19536 GCGCAAAAG-TTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAA 19594
| | | || ||| || || ||||| || | ||||||||||| | | | |||||||
Sbjct 874262 GTGAAGAATCTTCCTTACATATTATCATTTTTGATGAATTGGATTCTGTGTTCAAGCAAA 874203
Query 19595 GAGGT------TCTGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAA 19648
||||| |||| || | || || ||| | | || |||||| | | | |
Sbjct 874202 GAGGTTCCAAATCTGATGGTACCGGTGTCGCTGATAACTTGGTTAATCAATTATTAGCTA 874143
Query 19649 AATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGG 19708
| | || ||||| | ||| | || |||||||| ||||| || ||||| |||||| |
Sbjct 874142 AGATGGATGGTGTGGAACAATTAAACAATATTTTGGTTATCGGTATGACCAATAGAAAAG 874083
Query 19709 AATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACT 19768
| || || || || |||||||| |||| ||| | || ||| | | | |||||| |
Sbjct 874082 ATTTGATCGATAGTGCCTTATTGAGACCTGGTAGATTTGAAGTGCAAGTTGAAATTCATC 874023
Query 19769 TACCCGATGAA 19779
| || ||||||
Sbjct 874022 TCCCAGATGAA 874012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455888588115
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |