Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq5 300 2e-76 seq3 104 3e-17 >seq5 Length=915096 Score = 300 bits (332), Expect = 2e-76 Identities = 1066/1644 (65%), Gaps = 35/1644 (2%) Strand=Plus/Plus Query 110369 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTG 110428 |||||||| |||||||| | || | ||||| |||| | ||||| |||| | ||| Sbjct 37916 TAGTACATACCGGTCTTTAAACCCTTCTTCCAACCGTAGAAGTGCATGGAAGTCAACTTA 37975 Query 110429 GACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATG-AAGCGCCC 110487 ||| |||||| | || | || ||||||| |||| ||| |||| | |||| || Sbjct 37976 CCCATAGTTGGAGCTCTCAAGTGGATGTTCATAGATTGAGATTGATCAACGTAAGCACCT 38035 Query 110488 CCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAGAG 110547 | || || | ||||||||||| | ||| |||||||||||| || ||| | Sbjct 38036 CTGTCA-GCAGACATATCAATGATAGACTTTTGAGAAATTTCCCAAACGGTCTTATACAA 38094 Query 110548 ATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCAT 110607 | || | ||||| || | | || | || || |||||||| | | || Sbjct 38095 TTGTTTTAATTCATCAGGAACGTTTGGCAAGTTTTGAATGGAACCATTATCAGAAATAAT 38154 Query 110608 GAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTT 110667 | | | ||||||| | ||| | |||| | | || | | | || Sbjct 38155 GTGGTTCTTCATAGAGTCATCCCATAATCCAAGGTCAACCAAATCTCTCAACAAGTATGG 38214 Query 110668 GTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGG 110727 ||| ||||| || ||||| || || |||||| ||| || || | |||||||| Sbjct 38215 GTTAACAATTTGGAATTCACCAGCTAGCACTCTTCTAGAGTAAATATTGGAAGTGTATGG 38274 Query 110728 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 110787 ||| || |||||||| | |||||||||||| | || || || ||||||||||| || | Sbjct 38275 TTCGAAACATTCATTGTAACCCAAGATTTGGGAAGTAGAAGCAGTTGGCATTGGAGCAAG 38334 Query 110788 CAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG-- 110845 || | ||| | | ||| || | |||| | |||||| | ||||||||| Sbjct 38335 TAATAAGGAGTTTCTTAAACCATTGGTCATGATTCTTTCCTTCAAGTTATCCCAGTCCCA 38394 Query 110846 TAGTTGAGCTTGGTTTCACCTTCCCACATG--TCAAACTGAAGCACCCCTTGGGACGCGG 110903 || | || |||| ||| || || ||| || || || | | |||||||| || | Sbjct 38395 TAAATCAG-TTGGCTTC---TTACCCCATAAATCGAATTGCAAGATACCTTGGGAAGCTG 38450 Query 110904 GAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCA---GCCAATTCACAGCTCGCCT 110960 ||||||| ||||| |||||||| ||||| |||| || ||||| | |||| Sbjct 38451 GAGAACCTTCAAAAGTTTCATACTTACCTT---CTTCGATGGCTAATTCGACGGAGGCCT 38507 Query 110961 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 111020 | | | | || || | |||||||||||| || || | | || ||||| | Sbjct 38508 CTAAAGCACCATGGTAAAGGGTTTCAAAGATTTGAATGTTTAACAATTTAGCTTCTGGAG 38567 Query 111021 AATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACACCCAAACCA 111079 | ||||||| | | || || || ||| |||| || | |||||||||||| | || Sbjct 38568 AGTCAAATG-GAATTCTCAGTAACATGAATGCATCAGCTAAACCTTGAACACCAAGGGCA 38626 Query 111080 ATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCA 111139 |||||||||| || ||| ||||| || ||||| ||||| || ||| |||||||||| Sbjct 38627 ATAGGTCTGTTTCTCATGTTAGAACGTCTAGCAGTTTCAACTGGGTAATAATTTCTGTCG 38686 Query 111140 ATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCA 111199 || | || | || || | |||| ||| | ||| || || | |||||| | | Sbjct 38687 ATAATCTTATTCAAGTTCTTAGAGACAACCTTGGCGATCTCGTGTAACTTTTCAAAGTTG 38746 Query 111200 AA---AGTGCGAGTCTCTTCA---TTGACATACTTTGGAAGGGCGATTGATGCCAAATTG 111253 | |||| |||| ||| | ||| | ||||||||| || || ||||| || Sbjct 38747 TACCAAGTGTTCTTCTCATCAGATTCAACAAAGGCTGGAAGGGCAATGGAAGCCAAGTTA 38806 Query 111254 CAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTC 111313 || ||||| || || | | ||| | ||| || | |||||| ||| |||||||| | Sbjct 38807 CACACAGCGGTTTCTTGTTCATCGGAGTATTCAACAATTTCACAACACAAGTTGGAGGAC 38866 Query 111314 TTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATG 111373 |||||| | ||||| ||||||||||| |||||||| || ||||||||||| | |||| Sbjct 38867 TTAATCATACCCAAGTTCTTTTGGTTGGATTTCTTGTTACAGGCATCCTTGTATAACATG 38926 Query 111374 TAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGG 111432 | || || || ||||| || || | || | || | | ||| ||| | | | || | Sbjct 38927 AATGGGGTACCAGTCTCAGTTTGAGCTTCTAAGATGGAGTACCATAACTTTTGAGCCTTG 38986 Query 111433 TACAATGGCGTTGGCCCGTCCCTCCGC-CTCGTACTTTGTGTAGAGGGCTTCAAACTCCT 111491 | | ||| | ||| | ||| | | ||||| || || | |||| || || | Sbjct 38987 -ATAGTGG-ATCTACCCTTACCTTCTCTTTCGTATCTTTCATACAATTCTTCGAATTCAT 39044 Query 111492 CACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCAC 111551 |||| | || | |||||| || | ||| |||| | || ||||| |||| Sbjct 39045 CACCGTAGACATCACCTAAACCTGGAGCTTCAGATGGGGAGAACAAAGTCCATTCACCAT 39104 Query 111552 CTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA- 111610 ||||| | ||||||||| | ||||| ||||| | || || || | ||||||| Sbjct 39105 TAGATTCAACTCTCTTCATGAATAAATCTGGGATCCATAAGGCTGGGAACAAATCTCTAG 39164 Query 111611 CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCG 111670 | | || ||||| | ||| ||||| || | |||| || || | |||||| ||| Sbjct 39165 CTCTGA-TTTCTTCCTTACCGTGGTTCTTTCTAATGTCAATAAAATCAAAGATATCAGCG 39223 Query 111671 TGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTAC 111726 |||||||| |||| || | || | || || || | | ||| |||||| || Sbjct 39224 TGCCATGGTTCAATGTACAAGGCAAAAGCACCTGGTCTCTTG-TTACCACCTTGATCAAC 39282 Query 111727 ATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATT 111786 || | || ||| ||| || || | | ||||||||| ||||| | || ||| || Sbjct 39283 GTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATACCGTTAGAGGTACCGTT 39342 Query 111787 TGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCC 111846 || || || ||| | ||||| | || |||||||| | ||||||||| || Sbjct 39343 AGTACCAGCGATGTAAGAACCGGTAGCTCTGATATTGTGGATGTGTAACCCAATACCACC 39402 Query 111847 AGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTC 111906 ||| ||| || || | ||||| ||| | | ||| | || || || | || ||||| Sbjct 39403 AGCGGTCTTAGAAATCAGAGCACATTCCTTCAAAGTATCGTAAATCCCTTCAATGGAGTC 39462 Query 111907 CTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAA 111966 ||||| |||| | | ||| ||| ||||| || || || ||||||||||| || Sbjct 39463 ATCCTTCATGGCAACTAAGAAACAAGAAGACATTTGTGGGTGAGGAGTACCAGCATTAAA 39522 Query 111967 GAGGGTTGGTGTTGCGTGAATGAA 111990 | ||||| | |||||| |||| Sbjct 39523 CAAAGTTGGAGACGCGTGAGTGAA 39546 Score = 89.7 bits (98), Expect = 6e-13 Identities = 644/1018 (63%), Gaps = 37/1018 (4%) Strand=Plus/Minus Query 110369 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTG 110428 ||||| || || ||||| | || | |||||| || | ||||||| | | || Sbjct 154399 TAGTAAATACCAGTCTTCAAGCCCTTAGACCATGCATAGAAATGCATACTGGTCAATTTT 154340 Query 110429 GACATCGTTGGACTTTCC--ATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAGCGCC 110486 ||||||||||| || || ||| |||| ||||||||||| ||| |||||||| | Sbjct 154339 GACATCGTTGG--TTCCCTGATGTAGAGATTCATACTTTGTGATTGATCAATGAATGGAG 154282 Query 110487 CCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAGA 110546 | | | ||| ||||| ||||||| | ||| | || ||||||||||| ||| Sbjct 154281 CTCTATCTGCAGCCATCTCAATGATAATCTTTTGCGACATCTCCCAAACTGTTTTATACT 154222 Query 110547 GATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCA--- 110603 ||||||||||| ||| || | | || |||||||| || ||| | || | Sbjct 154221 TGTTCTTGATATCCAATGGAATGCCAGCTATGTTCTGGATTGA---CCCATCATTGAATA 154165 Query 110604 CCATGAGATCCTTCATATCCTTGGACCAGAGACCA--ATCTTCTTGAGGTCATTGACGAG 110661 | || | || || || | | ||| | |||| ||| || | |||| | | Sbjct 154164 CAATCAAATTTTTGATTTTTTCATCCCACAAACCAGCATCAACTAAA--TCATCAATCAA 154107 Query 110662 GTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGT 110721 || ||||||||||| || ||||| | | |||||| || || || | || Sbjct 154106 GTATTTGTTGACAATTTGGAATTCACCAGACAATACTCTTCTAGAATACATATTAGAAGT 154047 Query 110722 GTATGGTTCAAAGCATTCATTATTACCCAAGATT-TGTGCGGTGGAGGCTGTTGGCATTG 110780 | |||||||| |||||| | | |||||| | |||| || || || || ||||| Sbjct 154046 GATCGGTTCAAAACATTCAGTGA-ATCCAAGAATCTGTGAAGTAGATGCAGTGGGCATCA 153988 Query 110781 GTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTG--ATGCGTTCCTTGAGAACATC 110838 || | || | ||| | | ||| | | || | | | |||| | ||| Sbjct 153987 AAGCTACTAACAATGAGTTTCTGATACCGTAC--CTGGCAACACCAGCCTTCAATTTATC 153930 Query 110839 CCAGTCG--TAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGG 110896 ||| || ||||| || | || || | ||| | ||| |||| || | || || Sbjct 153929 CCAATCCCATAGTTTAGTAGGCTTGCAATT--CCAAAGATCATACTGGAGTAGGCCCTGC 153872 Query 110897 GACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCAC-AGCT 110955 || || || ||||||| | | | |||||| ||||| | || ||||| |||| || | Sbjct 153871 GATGCTGGTGAACCCTGATATGATTCATATGAACCCTTCTTTTTAGCCAGTTCAATAGAT 153812 Query 110956 CGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTC-CTTG-GCT 111013 || ||| | ||| ||||| || |||||||| || | | ||| | || |||| ||| Sbjct 153811 -GCAGTCAGTGCTGCATGATAGATAGTTTCAAATATTTGTGTATTTAACTGTCTTGAGCT 153753 Query 111014 T-CATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACC 111072 | |||| | |||| | || | | | || || || | |||||||||||| Sbjct 153752 TTCATC---ACCAAAGGTATATCCCATCTTGAAGAAGGTGTCTGCCAAACCTTGAACACC 153696 Query 111073 CAAACCAATAGGTCTGTGTCGCATATTAGACTT-TCGCGCAGTCTCAACGGGATAAAAAT 111131 | | | || |||| || ||||||||| | ||| || || ||||| | Sbjct 153695 AACGGCGACCGGCCTGTTTCTCATATTAGAAGTCTCG-GCCTCCTTTGTTGGATATGATC 153637 Query 111132 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTT 111191 ||||| || | ||||| ||| | || || | || ||| ||||||| || Sbjct 153636 CAACATCAATCACCTTATCGAGATTCTTGATGACTATTTGAGTTATTCTATGAAGTAATT 153577 Query 111192 CATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAAT 111251 | ||||||| | | | ||| ||| || |||| ||||| | || || | || Sbjct 153576 TAAAATCAAATTTCT---TGTTGGCATCCACAAACATTGGTAGGGCCACAGAGGCAAGAT 153520 Query 111252 TGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAAC 111311 | || ||||| || |||||||| | ||||| | ||||| ||||||||| ||| Sbjct 153519 TACACACAGCAGTTTCATCCTTTGAGGAATACTCCACTATTTCGCAACATAAGTTAGAAG 153460 Query 111312 TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAG 111369 ||| || || ||||||||||| || || ||||| ||||| | ||||||||| || Sbjct 153459 ACTTGATAGTTCCCAAATTCTTCTGATTGGATTTCTTATTGCATGAATCCTTGTATAG 153402 >seq3 Length=1585198 Score = 104 bits (114), Expect = 3e-17 Identities = 136/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 164578 TAGCCATTCTCATGCCAAATGGTGTGTATGGTCGTGTTGCACCACGATCCGGTCTCGCTG 164637 || ||||| || | || | ||| || ||| | || || ||| |||| ||||| |||| Sbjct 969098 TATCCATTATCGTTCCTGAAGGTACCTACGGTAGAGTCGCTCCAAGATCTGGTCTTGCTG 969157 Query 164638 TGAAGCATGGTAT-TCAAGTTGGTGCGGGTGTTATTGATCCCGACTATACAGGTGAAGTC 164696 ||||| ||||||| || | | ||||| ||||| ||||| |||| || | |||||||||| Sbjct 969158 TGAAGAATGGTATCTCCACT-GGTGCCGGTGTGGTTGATGCCGATTACAGAGGTGAAGTC 969216 Query 164697 AAAGTCGTTCTCTTCAATCACGGAGACAAAGACTTTGAGGTAAAGAAAGGGGATCGCATC 164756 || || ||| | ||||||||| ||||| || || | | | |||| ||| | ||| Sbjct 969217 AAGGTTGTTTTATTCAATCACTCTGACAAGGATTTCGCCATTGAACAAGGTGATAGAATC 969276 Query 164757 GCACAA 164762 |||||| Sbjct 969277 GCACAA 969282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031819440800