Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq5 257 2e-63 seq3 111 2e-19 >seq5 Length=915096 Score = 257 bits (284), Expect = 2e-63 Identities = 839/1295 (65%), Gaps = 15/1295 (1%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 || ||||||| |||||||| || || || ||||||| |||||||||||||| || || Sbjct 38255 TAAATATTGGAAGTGTATGGTTCGAAACATTCATTGTAACCCAAGATTTGGGAAGTAGAA 38314 Query 118242 GCTGTGGGCATGGGTGCCA-TGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTC 118300 || || ||||| || || | | | |||| ||| | | ||| || | | || | ||| Sbjct 38315 GCAGTTGGCATTGGAGCAAGTAATAAGGA-GTTTCTTAAACCATTGGTCATGATTCTTTC 38373 Query 118301 CTTGAGAGCGTCCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGG 118358 ||| | |||||||| || | || ||| || | ||| | ||| || || Sbjct 38374 CTTCAAGTTATCCCAGTCCCATAAATCAG--TTGGCTTCTTACCCCATAAATCGAATTGC 38431 Query 118359 AGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 118418 | |||||||||||| ||||| || || ||||| || ||||| || || | || Sbjct 38432 AAGATACCTTGGGAAGCTGGAGAACCTTCAAAAGTTTCATACTTACCTTCTTCGATGGCT 38491 Query 118419 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATT 118478 |||||| | ||||| | || | || || | |||||||| || || || | Sbjct 38492 AATTCGACGGAGGCCTCTAAAGCACCATGGTAAAGGGTTTCAAAGATTTGAATGTTTAAC 38551 Query 118479 GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCT 118538 || || || || ||||| | | || || || ||| |||| || | |||| Sbjct 38552 AATTTAGCTTCTGGAGAGTCAAATGGAATTCTCAGTAACATGAATGCATCAGCTAAACCT 38611 Query 118539 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGA 118598 || ||||| ||| |||| || | | |||||| ||||| | ||| || || || || Sbjct 38612 TGAACACCAAGGGCAATAGGTCTGTTTCTCATGTTAGAACGTCTAGCAGTTTCAACTGGG 38671 Query 118599 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 118658 ||| |||| || ||||||| | |||| | || || | ||||||||| | ||| || || Sbjct 38672 TAATAATTTCTGTCGATAATCTTATTCAAGTTCTTAGAGACAACCTTGGCGATCTCGTGT 38731 Query 118659 AGCTTTTC---GTAATCAAAACTGCGAGTCTCTTCA---TTGACATACTTAGGAAGGGCG 118712 | |||||| || | || || |||| ||| | ||| | |||||||| Sbjct 38732 AACTTTTCAAAGTTGTACCAAGTGTTCTTCTCATCAGATTCAACAAAGGCTGGAAGGGCA 38791 Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772 || || |||| |||||||||| ||| || | | ||| | ||| || | |||||| Sbjct 38792 ATGGAAGCCAAGTTACACACAGCGGTTTCTTGTTCATCGGAGTATTCAACAATTTCACAA 38851 Query 118773 CACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 118832 |||||||| || |||||| | |||||||||||||| || || || ||||||| ||| Sbjct 38852 CACAAGTTGGAGGACTTAATCATACCCAAGTTCTTTTGGTTGGATTTCTTGTTACAGGCA 38911 Query 118833 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 118892 |||||||| | |||| |||| || || ||||| ||||| | | | || | | ||| Sbjct 38912 TCCTTGTATAACATGAATGGGGTACCAGTCTCAGTTTGAGCTTCTAAGATGGAGTACCAT 38971 Query 118893 ACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGG 118952 | | ||| | ||||| | | || ||| ||||| || || | Sbjct 38972 AACTTTTGAGCCTTGATAGTGGATCTACCCTTACCTTCTCTTTCGTATCTTTCATACAAT 39031 Query 118953 GCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGA 119012 |||| || || ||||| | | || | ||||| || | | |||| |||| | | Sbjct 39032 TCTTCGAATTCATCACCGTAGACATCACCTAAACCTGGAGCTTCAGATGGGGAGAACAAA 39091 Query 119013 GACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAG 119072 | ||||| |||| ||||| | ||||||||| | ||||||||||| | || | | Sbjct 39092 GTCCATTCACCATTAGATTCAACTCTCTTCATGAATAAATCTGGGATCCATAAGGCTGGG 39151 Query 119073 AAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCC 119132 || | ||| | | | |||||| | || || || | | || | ||| || Sbjct 39152 AACAAATCTCTAGCTCTGATTTCTTCCTTACCGTGGTTCTTTCTAATGTCAATAAAATCA 39211 Query 119133 ATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACGACG--ACCA 119189 | |||||| |||||||| ||||| | ||||| || | | ||| | | |||| Sbjct 39212 AAGATATCAGCGTGCCATGGTTCAATGTACAAGGCAAAAGCACCTGGTCTCTTGTTACCA 39271 Query 119190 GCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCG 119249 | || | || || || || ||| ||| || || | | ||||||||||||||| | Sbjct 39272 CCTTGATCAACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATACCGTTA 39331 Query 119250 GATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATA 119309 || || || || || || ||| | ||||||| || ||||||||| | Sbjct 39332 GAGGTACCGTTAGTACCAGCGATGTAAGAACCGGTAGCTCTGATATTGTGGATGTGTAAC 39391 Query 119310 CCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCA 119369 |||||||| || || ||| || || | || || ||| | | | | |||| ||||| Sbjct 39392 CCAATACCACCAGCGGTCTTAGAAATCAGAGCACATTCCTTCAAAGTATCGTAAATCCCT 39451 Query 119370 TCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTA 119429 || || |||||| |||| | || | | ||| || |||||||| || || ||| Sbjct 39452 TCAATGGAGTCATCCTTCATGGCAACTAAGAAACAAGAAGACATTTGTGGGTGAGGAGTA 39511 Query 119430 CCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464 ||||| || || | |||||| | |||||| |||| Sbjct 39512 CCAGCATTAAACAAAGTTGGAGACGCGTGAGTGAA 39546 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 118695 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 118754 ||| || | || ||||| | || || ||||||||||||| || |||||||| | Sbjct 153550 ACAAACATTGGTAGGGCCACAGAGGCAAGATTACACACAGCAGTTTCATCCTTTGAGGAA 153491 Query 118755 TACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 118814 ||||| | ||||| || ||||| ||| ||| || || ||||| ||||| ||||| Sbjct 153490 TACTCCACTATTTCGCAACATAAGTTAGAAGACTTGATAGTTCCCAAATTCTTCTGATTG 153431 Query 118815 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 118872 || || | || || | ||||||||| || | |||| | || ||||| ||||||| Sbjct 153430 GATTTCTTATTGCATGAATCCTTGTATAGTAGAAATGGGTTACCAGTCTCAGTTTGGG 153373 >seq3 Length=1585198 Score = 111 bits (122), Expect = 2e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 167942 AGGTGTCTACGGTCGCGTGGCGCCAAGATCTGGACTCGCTGTGAAGAGTGGTATCCAAGT 168001 |||| ||||||| | || || ||||||||||| || |||||||||| ||||||| Sbjct 969117 AGGTACCTACGGTAGAGTCGCTCCAAGATCTGGTCTTGCTGTGAAGAATGGTATCTCCAC 969176 Query 168002 TGGTGCGGGTGTTGTTGATCCAGACTATACGGGTGAAGTCAAAGTCGTTCTCTTCAATCA 168061 |||||| ||||| |||||| | || || | ||||||||||| || ||| | |||||||| Sbjct 969177 TGGTGCCGGTGTGGTTGATGCCGATTACAGAGGTGAAGTCAAGGTTGTTTTATTCAATCA 969236 Query 168062 CGGGCACACAGATTTCCAAATCAAAAAGGGGGATCGCATCGCGCAACTCATCTTAGAGA 168120 | ||| |||||| || || | || ||| | ||||| ||| | | ||||||| Sbjct 969237 CTCTGACAAGGATTTCGCCATTGAACAAGGTGATAGAATCGCACAATTGGTGTTAGAGA 969295 Score = 86.0 bits (94), Expect = 8e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | ||| || || | |||||| ||| || ||||| | |||| Sbjct 913653 GCAAAGTCAGTGTGTAAACCTTCATCTCTACAGATGAATTCGTTAGAGAAAGTTAAACCT 913594 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| | ||| | ||||||||||||||| || | | ||| || |||||||||||||| Sbjct 913593 GGCATTAAACCTCTCTTCTTCAACCAGAAGATGGAAGCAAAGGAACCAGAGAAGAAGATA 913534 Query 130136 CCCTCCACACACGCGAACGCAA 130157 ||||| || ||||| |||| Sbjct 913533 CCCTCAACGGCAGCGAAGGCAA 913512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435022199880