Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq5 286 4e-72 seq3 98.7 1e-15 >seq5 Length=915096 Score = 286 bits (316), Expect = 4e-72 Identities = 1070/1654 (65%), Gaps = 53/1654 (3%) Strand=Plus/Minus Query 104315 TTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGT 104374 |||| |||||| | ||||| | || ||||||||||| || || |||||||| | Sbjct 39546 TTCACTCACGCGTCTCCAACTTTGTTTAATGCTGGTACTCCTCACCCACAAATGTCTTCT 39487 Query 104375 TGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAG 104434 || ||| | | |||| ||||| ||||| || | || || || | ||| | | ||| Sbjct 39486 TGTTTCTTAGTTGCCATGAAGGATGACTCCATTGAAGGGATTTACGATACTTTGAAGGAA 39427 Query 104435 TGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCC 104494 ||||| | || || ||| ||||| ||||||||| | |||||||| || | ||||| Sbjct 39426 TGTGCTCTGATTTCTAAGACCGCTGGTGGTATTGGGTTACACATCCACAATATCAGAGCT 39367 Query 104495 AATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGC 104554 | ||| || || || || ||| || | ||||| ||||||||| | | Sbjct 39366 ACCGGTTCTTACATCGCTGGTACTAACGGTACCTCTAACGGTATCATTCCAATGGTGAGA 39307 Query 104555 GTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTAT 104610 || || ||| ||| || | || || |||||| ||| | | || || || | Sbjct 39306 GTGTTCAACAACACCGCCAGATACGTTGATCAAGGTGGTAA-CAAGAGACCAGGTGCTTT 39248 Query 104611 CGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAA 104670 || | || |||| ||||||||||| |||||| | || || |||| | | || Sbjct 39247 TGCCTTGTACATTGAACCATGGCACGCTGATATCTTTGATTTTATTGACATTAGAAAGAA 39188 Query 104671 CCAAGGTGACGAGGAGGCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATC 104729 ||| ||| | || || | | || | ||| | ||| | || | ||||| |||||| Sbjct 39187 CCACGGTAAGGAAGAAAT-CAGAGCTAGAGATTTGTTCCCAGCCTTATGGATCCCAGATT 39129 Query 104730 TCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCAC 104789 | ||||||||||||||||| | ||| | ||| || | || | ||| | || | Sbjct 39128 TATTCATGAAGAGAGTTGAATCTAATGGTGAATGGACTTTGTTCTCCCCATCTGAAGCTC 39069 Query 104790 CTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAG 104849 | ||| | |||| | ||||| || || |||| | || || ||||| || Sbjct 39068 CAGGTTTAGGTGATGTCTACGGTGATGAATTCGAAGAATTGTATGAAAGATACGAAAGAG 39009 Query 104850 AAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTC 104909 ||||| || | | || | ||| | | ||| | | || | | ||| Sbjct 39008 AAGGTAAGGGTAGATCCACTATCAAGGCTCAAAAGTTATGGTACTCCATCTTAGAAGCTC 38949 Query 104910 AAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATC 104969 |||| ||||||||||| |||| |||| | ||||| || ||||||||| | || || | Sbjct 38948 AAACTGAGACTGGTACCCCATTCATGTTATACAAGGATGCCTGTAACAAGAAATCCAACC 38889 Query 104970 AAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAG 105029 ||||||| |||||| |||| ||| ||||| | ||| ||||| | |||| | | Sbjct 38888 AAAAGAACTTGGGTATGATTAAGTCCTCCAACTTGTGTTGTGAAATTGTTGAATACTCCG 38829 Query 105030 ACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATC 105089 | || | || || |||||||||||| | || || || || || || | ||| || Sbjct 38828 ATGAACAAGAAACCGCTGTGTGTAACTTGGCTTCCATTGCCCTTCCAGCCTTTGTTGAAT 38769 Query 105090 CAGA-GACAAAGACATTTG-----ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCA 105143 | || || || ||| ||| | | |||||| | ||||| | | || |||| Sbjct 38768 CTGATGAGAAGAACACTTGGTACAACTTTGAAAAGTTACACGAGATCGCCAAGGTTGTCT 38709 Query 105144 CCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAAT 105203 | || ||| | || | |||| || ||||||| |||||| ||||| |||||| | | Sbjct 38708 CTAAGAACTTGAATAAGATTATCGACAGAAATTATTACCCAGTTGAAACTGCTAGACGTT 38649 Query 105204 CTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTC 105263 |||| |||||| || | || |||| || |||||||| ||| | || |||| |||||| Sbjct 38648 CTAACATGAGAAACAGACCTATTGCCCTTGGTGTTCAAGGTTTAGCTGATGCATTCATGT 38589 Query 105264 TTTGTCGCCACGCATTTGATTCCGACGAAGCGAA---GGAAATCAATGCGCGCATATTTG 105320 | | ||||||| || ||||| || | || || | | || |||| Sbjct 38588 TACTGAGAATTCCATTTGACTCTCCAGAAGCTAAATTGTTAAACATT---CAAATCTTTG 38532 Query 105321 AGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCAT 105380 | ||| | || || | ||| | ||||| || || || | || ||| | Sbjct 38531 AAACCCTTTACCATGGTGCTTTAGAGGCCTCCGTCGAATTAGCCATCGAAGAAGGTAAGT 38472 Query 105381 ATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAG 105440 ||||||| ||||| |||||||||||||| ||||| | | ||||| ||| | ||| | Sbjct 38471 ATGAAACTTTTGAAGGTTCTCCAGCTTCCCAAGGTATCTTGCAATTCGATTTATGG---G 38415 Query 105441 GTGAGA--CCAA--GCTTCACTACGACTGGGA-AGCTCTCAAGGAACGCATCAAGGAGAA 105495 || ||| |||| | || | | |||||||| | || | |||||| | |||| | || Sbjct 38414 GTAAGAAGCCAACTGATTTA-TGGGACTGGGATAACT-TGAAGGAAAGAATCATGACCAA 38357 Query 105496 GGGTCTTCGTAACAGTCTCCTCA----TGGCTCCAATGCCAACAGCCTCCACCGCACAAA 105551 ||| ||| | ||||| | | |||||||||||||| || || || | |||| Sbjct 38356 TGGT----TTAAGAAACTCCTTATTACTTGCTCCAATGCCAACTGCTTCTACTTCCCAAA 38301 Query 105552 TCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACC 105610 |||||||| | |||||||| || ||||| ||||| | || || || ||| |||||| Sbjct 38300 TCTTGGGTTACAATGAATGTTTCGAACCATACACTTCCAATATTTACTCT-AGAAGAGTG 38242 Query 105611 CTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT-CTCGTGGA-TGACCTCAAAGAGATTG 105668 || || || || || ||||| ||| ||| || || || || | || ||| Sbjct 38241 CTAGCTGGTGAATTCCAAATTGTTAAC--CCATACTTGTTGAGAGATTTGGTTGACCTTG 38184 Query 105669 GTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATA 105728 | | ||| | ||||||| | | ||| | | ||||||||||||||| Sbjct 38183 GATTATGGGATGACTCTATGAAGAACCACATTATTTCTGATAATGGTTCCATTCAAAACT 38124 Query 105729 TTGTGGATATTCCAAATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAA----TCAAG 105784 | | |||| ||||| | || | ||||| || |||||||||| |||| Sbjct 38123 TGCCAAACGTTCCTGATGAATTAAAACAATTGTATAAGACCGTTTGGGAAATTTCTCAA- 38065 Query 105785 ATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTT-CATTGATCAAAGTCAAAG 105843 ||| | ||||||| ||| | || || | ||| |||| | |||||||| |||| Sbjct 38064 ---AAGTCTATCATTGATATGTCTGCTGACAGAGGT-GCTTACGTTGATCAATCTCAATC 38009 Query 105844 TATGAATCTCTTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAG 105903 |||||| || | || | |||||| ||| ||| | |||| |||||| | ||| | Sbjct 38008 TATGAACATCCACTTGAGAGCTCCAACTATGGGTAAGTTGACTTCCATGCACTTCTACGG 37949 Query 105904 TTGGAAGAAGGGTCTCAAAACGGGGATGTATTAC 105937 ||||||||||||| | || || || ||||| ||| Sbjct 37948 TTGGAAGAAGGGTTTAAAGACCGGTATGTACTAC 37915 >seq3 Length=1585198 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 154115 GTTGCGCCACGATCTGGTCTCGCTGTGAAACATGGTATCCAAGTTGGTGCGGGTGTTGTT 154174 || || ||| |||||||||| |||||||| |||||||| |||||| ||||| ||| Sbjct 969133 GTCGCTCCAAGATCTGGTCTTGCTGTGAAGAATGGTATCTCCACTGGTGCCGGTGTGGTT 969192 Query 154175 GATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTTTTCAATCACGGAGACAAAGACTT 154233 ||| |||| |||| ||||||||||| || ||| | ||||||||| ||||| || || Sbjct 969193 GATGCCGATTACAGAGGTGAAGTCAAGGTTGTTTTATTCAATCACTCTGACAAGGATTT 969251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260632312520