Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq12 131 1e-25 >seq12 Length=324105 Score = 131 bits (144), Expect = 1e-25 Identities = 276/408 (68%), Gaps = 23/408 (6%) Strand=Plus/Minus Query 111730 TAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTGT 111789 || ||||| | ||| || ||| || || ||||| | || |||| | | ||||| Sbjct 267138 TACACATGAGAATCACCCATAGTGTGAATGAATTCACCTGGTTCCATATCCACAATGTGA 267079 Query 111790 GCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCCATA 111849 ||||||||||| || | || ||| ||||| || || |||||||||| |||||| Sbjct 267078 GCAATCATGTAAGTCAATAATGAATAAGATGCAATATTGAAAGGCACACCTAATCCCATA 267019 Query 111850 TCTCCCGATCTTTGATATAGCTGACATGATA------GTTTA--------TTTTGTGA-- 111893 || | ||||||||||| | |||||||||| ||||| ||||| || Sbjct 267018 TCACAAGATCTTTGATACATTTGACATGATAATCTTGGTTTACCTCCATCTTTTGGGAAG 266959 Query 111894 --CACATAAAATTGACAAAGTACATGACAAGGAGGCAATGCCA-TCCCATTCATAAAG-- 111948 |||||| |||||||||| |||||||| || || ||||||| | || | || || Sbjct 266958 TTCACATAGAATTGACAAAACACATGACATGGTGGTAATGCCATTTCCTTGAATGCAGGT 266899 Query 111949 GGTCCCCATGCACACATGATCATCCTTCTGCTGTAGCGATTA-TGTTCAATGTCGTGTAT 112007 || ||||||| | | || || ||||| ||| ||||| | ||||| || | || Sbjct 266898 GGATTCCATGCAGATAAAATAATTCTTCTATCGTATGGATTATTTTTCAAAGT-ATCAAT 266840 Query 112008 GACATTCAAGAGCTGGTCTATCCCTTTACCAGTATAATCCGCCTGACATCCAGTGTATGT 112067 | || | || || ||| ||||||| ||||| || | ||| | || || Sbjct 266839 AATTTTAGCTAATTGATCATACCCCTTACCAGAGTAATCAGCATCACAATCTGTATACTC 266780 Query 112068 TGCCCCATAGTGTCTCCATTGGAATCCATAAATAGGCCCCAGATCTCC 112115 ||| ||| |||||||||||||||||||||||| || || | ||| || Sbjct 266779 TGCACCAAAGTGTCTCCATTGGAATCCATAAACTGGACCTAAATCGCC 266732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391945490132749