Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016-
03-01] 23 sequences; 12,320,962 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq5 125 8e-24
>seq5
Length=915096
Score = 125 bits (138), Expect = 8e-24
Identities = 293/440 (67%), Gaps = 4/440 (1%)
Strand=Plus/Minus
Query 19195 CTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAG 19254
|||||| |||||| | || || | || || || ||||| |||| || |||||
Sbjct 39547 CTTCACTCACGCGTCTCCAACTTTGTTTAATGCTGGTACTCCTCACCCACAAATGTCTTC 39488
Query 19255 CTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGA 19314
|||||| |||| || |||||||||||| |||||| || || ||||| || | |||||
Sbjct 39487 TTGTTTCTTAGTTGCCATGAAGGATGACTCCATTGAAGGGATTTACGATACTTTGAAGGA 39428
Query 19315 GTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCACTGCTCGAATATCCGGTC 19374
|| || | || || ||| | || ||||| ||| | ||| | |||||| | |
Sbjct 39427 ATGTGCTCTGATTTCTAAGACCGCTGGTGGTATTGGGTTACACATCCACAATATCAGAGC 39368
Query 19375 GAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCG 19434
| ||| | ||| ||| || ||||| | |||||||| | |||||| | |
Sbjct 39367 TACCGGTTCTTACATCGCTGGTACTAACGGTACCTCTAACGGTATCATTCCAATGGTGAG 39308
Query 19435 CGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAACG--CAAGGGCTCG 19492
|| ||||||||||| ||||| ||||| | || || || ||| | || | |||
Sbjct 39307 AGTGTTCAACAACACCGCCAGATACGTTGATCAAGGTGGTAACAAGAGACCAGGTGCT-- 39250
Query 19493 TTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTG 19552
|| ||| | ||| | || ||||||||||| || || | ||||| | || | | |
Sbjct 39249 TTTGCCTTGTACATTGAACCATGGCACGCTGATATCTTTGATTTTATTGACATTAGAAAG 39190
Query 19553 AACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGAC 19612
||||| ||| | || || || | | | || | ||| | ||||| ||||| || ||
Sbjct 39189 AACCACGGTAAGGAAGAAATCAGAGCTAGAGATTTGTTCCCAGCCTTATGGATCCCAGAT 39130
Query 19613 CTATTCATGGAGAAGGTTGA 19632
|||||||| ||| |||||
Sbjct 39129 TTATTCATGAAGAGAGTTGA 39110
Score = 95.1 bits (104), Expect = 1e-14
Identities = 131/181 (72%), Gaps = 2/181 (1%)
Strand=Plus/Plus
Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249
|||| ||| |||||||| || ||||| | |||||||||||| ||||| | ||||||
Sbjct 37907 GTTCTCAAGTAGTACATACCGGTCTTTAAACCCTTCTTCCAACCGTAGAAGTGCATGGAA 37966
Query 78250 GACAGCTTGGCCAGACTCGG-GTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGAT 78308
| || ||| ||| | | || | ||| || | |||||| | || || || || || |
Sbjct 37967 GTCAACTTACCCATAGTTGGAGCTCT-CAAGTGGATGTTCATAGATTGAGATTGATCAAC 38025
Query 78309 GTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGT 78368
||| ||||| | ||| || | ||| || |||| |||||||| | ||| ||||| | |||
Sbjct 38026 GTAAGCACCTCTGTCAGCAGACATATCAATGATAGACTTTTGAGAAATTTCCCAAACGGT 38085
Query 78369 C 78369
|
Sbjct 38086 C 38086
Score = 87.8 bits (96), Expect = 2e-12
Identities = 329/516 (64%), Gaps = 0/516 (0%)
Strand=Plus/Plus
Query 79372 TCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGC 79431
||||| ||| |||||| | || |||||||| | ||| | ||| | || | |
Sbjct 39110 TCAACTCTCTTCATGAATAAATCTGGGATCCATAAGGCTGGGAACAAATCTCTAGCTCTG 39169
Query 79432 ATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCAC 79491
|| || || | || |||||| | | || | ||| || | ||| || ||||||||
Sbjct 39170 ATTTCTTCCTTACCGTGGTTCTTTCTAATGTCAATAAAATCAAAGATATCAGCGTGCCAT 39229
Query 79492 GGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGG 79551
|| || | || | ||| || | ||| | |||| || || || | ||||| | |
Sbjct 39230 GGTTCAATGTACAAGGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAACGTATCTG 39289
Query 79552 GCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCG 79611
|| ||||||||||| |||| | ||| || | ||| |||| | | ||||| || ||
Sbjct 39290 GCGGTGTTGTTGAACACTCTCACCATTGGAATGATACCGTTAGAGGTACCGTTAGTACCA 39349
Query 79612 TTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACCAC 79671
||| | |||| | || | || || | ||| | || || || || | |
Sbjct 39350 GCGATGTAAGAACCGGTAGCTCTGATATTGTGGATGTGTAACCCAATACCACCAGCGGTC 39409
Query 79672 TTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTC 79731
|| || || | || || ||||| | || ||||| || || || || ||||| ||||||
Sbjct 39410 TTAGAAATCAGAGCACATTCCTTCAAAGTATCGTAAATCCCTTCAATGGAGTCATCCTTC 39469
Query 79732 ATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTC 79791
|| || || | ||| || ||||| ||||||| ||||| || || || | ||
Sbjct 39470 ATGGCAACTAAGAAACAAGAAGACATTTGTGGGTGAGGAGTACCAGCATTAAACAAAGTT 39529
Query 79792 GGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGG 79851
|| | |||||| |||||| | | | ||||| || || || || | || |||
Sbjct 39530 GGAGACGCGTGAGTGAAGTATCTCTCAGACATCAAATTATAGGTTTCAATCACCTTTGGG 39589
Query 79852 AGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATG 79887
| | || |||||||| || | ||||| | ||||
Sbjct 39590 ATATTATCACCGTGGATACCAATGGCGACTCTCATG 39625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524642299120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |