Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq5 105 7e-18 >seq5 Length=915096 Score = 105 bits (116), Expect = 7e-18 Identities = 331/508 (65%), Gaps = 6/508 (1%) Strand=Plus/Minus Query 53194 CATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGA 53253 |||| | |||||| | |||||||||||||| | | | || ||| || || | Sbjct 39625 CATGAGAGTCGCCATTGGTATCCACGGTGATAATATCCCAAAGGTGATTGAAACCTATAA 39566 Query 53254 CTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAA 53313 || ||| | | ||||| || ||||| | ||||| |||| || |||||||| Sbjct 39565 TTTGATGTCTGAGAGATACTTCACTCACGCGTCTCCAACTTTGTTTAATGCTGGTACTCC 39506 Query 53314 TCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCAT 53373 |||||| || ||||| || ||| | || || |||||||||||||| || || || || Sbjct 39505 TCACCCACAAATGTCTTCTTGTTTCTTAGTTGCCATGAAGGATGACTCCATTGAAGGGAT 39446 Query 53374 CTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCA 53433 ||||| || | ||||| ||||| | || || ||| | |||||||| || | || Sbjct 39445 TTACGATACTTTGAAGGAATGTGCTCTGATTTCTAAGACCGCTGGTGGTATTGGGTTACA 39386 Query 53434 CTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGG 53493 | | || || | || | ||| | ||| || || ||||| | | | || Sbjct 39385 CATCCACAATATCAGAGCTACCGGTTCTTACATCGCTGGTACTAACGGTACCTCTAACGG 39326 Query 53494 AATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGG 53553 ||| | || ||| | | || ||||||||||| ||| | ||||| | || |||||| Sbjct 39325 TATCATTCCAATGGTGAGAGTGTTCAACAACACCGCCAGATACGTTGATCAAGGTGGTAA 39266 Query 53554 GAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612 ||| | | ||| | | || ||| | ||| | || || |||||||| || || | || | Sbjct 39265 CAAGAGACCAGGTG-CTTTTGCCTTGTACATTGAACCATGGCACGCTGATATCTTTGATT 39207 Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGAT--GCGCTGCCGTGACCTGTTTAC 53670 || | || | | ||| || ||| | ||||| || | ||| | || |||| | Sbjct 39206 TTATTGACATTAGAAAGAACCACGGTAAGGAAGAAATCAGAGCT--AGAGATTTGTTCCC 39149 Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATG 53698 ||| | ||||| || || | |||||| Sbjct 39148 AGCCTTATGGATCCCAGATTTATTCATG 39121 Score = 100 bits (110), Expect = 3e-16 Identities = 127/172 (74%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 55744 GACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTA 55803 ||| || ||||| ||| | || ||| | | ||||| ||| |||||| | ||||| || Sbjct 38086 GACCGTTTGGGAAATTTCTCAAAAGTCTATCATTGATATGTCTGCTGACAGAGGTGCTTA 38027 Query 55804 CATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAA-TCCTTCACTGGCCAAGTTGA 55862 | | || || || || ||| |||||||| | || ||| ||| | ||| ||||||| Sbjct 38026 CGTTGATCAATCTCAATCTATGAACATCCACTTG-AGAGCTCCAACTATGGGTAAGTTGA 37968 Query 55863 GCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTA 55914 || |||||||| ||||| ||||||||||| | ||||| ||||||||||| Sbjct 37967 CTTCCATGCACTTCTACGGTTGGAAGAAGGGTTTAAAGACCGGTATGTACTA 37916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215842675400