Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016-
03-01] 23 sequences; 12,320,962 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq5 105 7e-18
>seq5
Length=915096
Score = 105 bits (116), Expect = 7e-18
Identities = 331/508 (65%), Gaps = 6/508 (1%)
Strand=Plus/Minus
Query 53194 CATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGA 53253
|||| | |||||| | |||||||||||||| | | | || ||| || || |
Sbjct 39625 CATGAGAGTCGCCATTGGTATCCACGGTGATAATATCCCAAAGGTGATTGAAACCTATAA 39566
Query 53254 CTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAA 53313
|| ||| | | ||||| || ||||| | ||||| |||| || ||||||||
Sbjct 39565 TTTGATGTCTGAGAGATACTTCACTCACGCGTCTCCAACTTTGTTTAATGCTGGTACTCC 39506
Query 53314 TCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCAT 53373
|||||| || ||||| || ||| | || || |||||||||||||| || || || ||
Sbjct 39505 TCACCCACAAATGTCTTCTTGTTTCTTAGTTGCCATGAAGGATGACTCCATTGAAGGGAT 39446
Query 53374 CTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCA 53433
||||| || | ||||| ||||| | || || ||| | |||||||| || | ||
Sbjct 39445 TTACGATACTTTGAAGGAATGTGCTCTGATTTCTAAGACCGCTGGTGGTATTGGGTTACA 39386
Query 53434 CTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGG 53493
| | || || | || | ||| | ||| || || ||||| | | | ||
Sbjct 39385 CATCCACAATATCAGAGCTACCGGTTCTTACATCGCTGGTACTAACGGTACCTCTAACGG 39326
Query 53494 AATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGG 53553
||| | || ||| | | || ||||||||||| ||| | ||||| | || ||||||
Sbjct 39325 TATCATTCCAATGGTGAGAGTGTTCAACAACACCGCCAGATACGTTGATCAAGGTGGTAA 39266
Query 53554 GAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612
||| | | ||| | | || ||| | ||| | || || |||||||| || || | || |
Sbjct 39265 CAAGAGACCAGGTG-CTTTTGCCTTGTACATTGAACCATGGCACGCTGATATCTTTGATT 39207
Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGAT--GCGCTGCCGTGACCTGTTTAC 53670
|| | || | | ||| || ||| | ||||| || | ||| | || |||| |
Sbjct 39206 TTATTGACATTAGAAAGAACCACGGTAAGGAAGAAATCAGAGCT--AGAGATTTGTTCCC 39149
Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATG 53698
||| | ||||| || || | ||||||
Sbjct 39148 AGCCTTATGGATCCCAGATTTATTCATG 39121
Score = 100 bits (110), Expect = 3e-16
Identities = 127/172 (74%), Gaps = 2/172 (1%)
Strand=Plus/Minus
Query 55744 GACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTA 55803
||| || ||||| ||| | || ||| | | ||||| ||| |||||| | ||||| ||
Sbjct 38086 GACCGTTTGGGAAATTTCTCAAAAGTCTATCATTGATATGTCTGCTGACAGAGGTGCTTA 38027
Query 55804 CATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAA-TCCTTCACTGGCCAAGTTGA 55862
| | || || || || ||| |||||||| | || ||| ||| | ||| |||||||
Sbjct 38026 CGTTGATCAATCTCAATCTATGAACATCCACTTG-AGAGCTCCAACTATGGGTAAGTTGA 37968
Query 55863 GCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTA 55914
|| |||||||| ||||| ||||||||||| | ||||| |||||||||||
Sbjct 37967 CTTCCATGCACTTCTACGGTTGGAAGAAGGGTTTAAAGACCGGTATGTACTA 37916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215842675400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |