Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016-
03-01] 23 sequences; 12,320,962 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq14 107 2e-18
seq5 107 2e-18
seq3 98.7 1e-15
>seq14
Length=138463
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| | || || ||||| || ||| | |||||||| || |
Sbjct 121010 ATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTAGAGGTTGAATCCTCT 120951
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | ||| |||| ||||| || ||||| || || || || || ||
Sbjct 120950 GACACTATTGACAATGTCAAGTCTAAGATTCAAGATAAGGAAGGTATCCCACCTGATCAA 120891
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | |||| ||||||||||||||| | || |||| | | || || | || || ||
Sbjct 120890 CAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGATTACAAC 120831
Query 27586 GTCCAAAAGGAATCCAC 27602
| ||||||||||| ||
Sbjct 120830 ATTCAAAAGGAATCAAC 120814
>seq5
Length=915096
Score = 107 bits (118), Expect = 2e-18
Identities = 124/167 (74%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 27452 AGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAA 27511
||||||| || ||||| ||||| ||| | || ||||||| || |||||||| || |
Sbjct 587746 AGGTTGAATCCTCTGATACCATTGACAATGTCAAATCTAAAATCCAAGACAAGGAAGGTA 587687
Query 27512 TTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCC 27571
| || ||||| || || | |||| ||||||||||||||| | || |||| | | || |
Sbjct 587686 TCCCACCAGATCAACAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTC 587627
Query 27572 TAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| | ||||| || |||||||||||||||| | || | ||||||
Sbjct 587626 TTTCCGACTACAACATCCAAAAGGAATCCACCTTGCACTTGGTCTTG 587580
Score = 98.7 bits (108), Expect = 1e-15
Identities = 133/180 (74%), Gaps = 4/180 (2%)
Strand=Plus/Plus
Query 80047 TAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGCTT- 80105
|||||||| || ||||| | ||||||||||| ||||| | |||||| ||| | | |||
Sbjct 37916 TAGTACATACCGGTCTTTAAACCCTTCTTCCAACCGTAGAAGTGCATGGAAGTCAACTTA 37975
Query 80106 CGCA-AGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCCC 80164
| || ||| ||| | ||| || | |||||||| ||| ||||| ||| | | |||| |
Sbjct 37976 CCCATAGT-TGGAGCTCT-CAAGTGGATGTTCATAGATTGAGATTGATCAACGTAAGCAC 38033
Query 80165 CACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTACGATACA 80224
| | || || | ||| ||||| || |||||||| | ||||||||| || || |||||
Sbjct 38034 CTCTGTCAGCAGACATATCAATGATAGACTTTTGAGAAATTTCCCAAACGGTCTTATACA 38093
>seq3
Length=1585198
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| ||||| | || || ||||| || ||| | ||||| || || |
Sbjct 1231334 ATGCAAATTTTTGTTAAGACCTTAACAGGTAAGACCATCACTTTAGAGGTCGAATCCTCT 1231393
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | ||| | || || || |||||||| || || || || || ||
Sbjct 1231394 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGATCAA 1231453
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || || || ||||||||| | || || | | | ||| | | || || ||
Sbjct 1231454 CAAAGATTGATCTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTGTCCGATTACAAC 1231513
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617
||||||||||||||||| | || | |||||
Sbjct 1231514 ATCCAAAAGGAATCCACTTTACACTTGGTCTT 1231545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310236035760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |